RNA–Protein interactions for RNA: ENST00000444166.1

COMMD1-203, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-203ENST00000444166 CREB3L3Q68CJ9 461 aa11.26□□□□□ -0.61
COMMD1-203ENST00000444166 PLA2G4FQ68DD2 849 aa11.26□□□□□ -0.61
COMMD1-203ENST00000444166 MIER3Q7Z3K6 550 aa11.26□□□□□ -0.61
COMMD1-203ENST00000444166 PRPF31Q8WWY3 499 aaKnown RBP11.26□□□□□ -0.61
COMMD1-203ENST00000444166 PIK3R5Q8WYR1 880 aa11.26□□□□□ -0.61
COMMD1-203ENST00000444166 DNASE1L2Q92874 299 aa11.26□□□□□ -0.61
COMMD1-203ENST00000444166 CCDC51Q96ER9 411 aa11.26□□□□□ -0.61
COMMD1-203ENST00000444166 CCDC136Q96JN2 1154 aa11.26□□□□□ -0.61
COMMD1-203ENST00000444166 DHX33Q9H6R0 707 aaKnown RBP11.26□□□□□ -0.61
COMMD1-203ENST00000444166 C6orf50Q9HD87 102 aa11.26□□□□□ -0.61
COMMD1-203ENST00000444166 HCFC1R1Q9NWW0 138 aa11.26□□□□□ -0.61
COMMD1-203ENST00000444166 FLNBO75369 2602 aaKnown RBP11.26□□□□□ -0.61
COMMD1-203ENST00000444166 COL4A2P08572 1712 aa11.26□□□□□ -0.61
COMMD1-203ENST00000444166 DMXL2Q8TDJ6 3036 aa11.25□□□□□ -0.61
COMMD1-203ENST00000444166 GOLGA8AA7E2F4 631 aa11.25□□□□□ -0.61
COMMD1-203ENST00000444166 GOLGA8BA8MQT2 603 aa11.25□□□□□ -0.61
COMMD1-203ENST00000444166 ADAM12O43184 909 aa11.25□□□□□ -0.61
COMMD1-203ENST00000444166 HRO43593 1189 aa11.25□□□□□ -0.61
COMMD1-203ENST00000444166 FOXD2O60548 495 aaPredicted RBP11.25□□□□□ -0.61
COMMD1-203ENST00000444166 TSPAN1O60635 241 aa11.25□□□□□ -0.61
COMMD1-203ENST00000444166 PROS1P07225 676 aa11.25□□□□□ -0.61
COMMD1-203ENST00000444166 SRGAP2CP0DJJ0 459 aa11.25□□□□□ -0.61
COMMD1-203ENST00000444166 USP11P51784 963 aa11.25□□□□□ -0.61
COMMD1-203ENST00000444166 LIMK1P53667 647 aa11.25□□□□□ -0.61
COMMD1-203ENST00000444166 LAMTOR4Q0VGL1 99 aa11.25□□□□□ -0.61
COMMD1-203ENST00000444166 PRR23BQ6ZRT6 265 aa11.25□□□□□ -0.61
COMMD1-203ENST00000444166 ZNF579Q8NAF0 562 aaKnown RBP11.25□□□□□ -0.61
COMMD1-203ENST00000444166 LNX1Q8TBB1 728 aaPredicted RBP11.25□□□□□ -0.61
COMMD1-203ENST00000444166 CCDC12Q8WUD4 166 aaPredicted RBP11.25□□□□□ -0.61
COMMD1-203ENST00000444166 PSPC1Q8WXF1 523 aaKnown RBP11.25□□□□□ -0.61
COMMD1-203ENST00000444166 RABGGTAQ92696 567 aa11.25□□□□□ -0.61
COMMD1-203ENST00000444166 SH2B1Q9NRF2 756 aaPredicted RBP11.25□□□□□ -0.61
COMMD1-203ENST00000444166 GDE1Q9NZC3 331 aa11.25□□□□□ -0.61
COMMD1-203ENST00000444166 DNMT3BQ9UBC3 853 aaKnown RBP11.25□□□□□ -0.61
COMMD1-203ENST00000444166 GIT1Q9Y2X7 761 aa11.25□□□□□ -0.61
COMMD1-203ENST00000444166 SF3B1O75533 1304 aaKnown RBP eCLIP11.25□□□□□ -0.61
COMMD1-203ENST00000444166 SPAG17Q6Q759 2223 aa11.25□□□□□ -0.61
COMMD1-203ENST00000444166 ZMYM2Q9UBW7 1377 aa11.25□□□□□ -0.61
COMMD1-203ENST00000444166 AKAP13Q12802 2813 aa11.25□□□□□ -0.61
COMMD1-203ENST00000444166 MAN2B1O00754 1011 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 FCARP24071 287 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 GNA11P29992 359 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 AXLP30530 894 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 CCR3P51677 355 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 NPEPPSP55786 919 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 PSMC5P62195 406 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 GRIK3Q13003 919 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 SIM2Q14190 667 aaPredicted RBP11.24□□□□□ -0.61
COMMD1-203ENST00000444166 HSP90AA2PQ14568 343 aaPredicted RBP11.24□□□□□ -0.61
COMMD1-203ENST00000444166 PPP2R5DQ14738 602 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 ACAP1Q15027 740 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 PCBP1Q15365 356 aaKnown RBP eCLIP11.24□□□□□ -0.61
COMMD1-203ENST00000444166 SLC5A9Q2M3M2 681 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 Q4G0T1 1027 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 PABPC1LQ4VXU2 614 aaKnown RBP11.24□□□□□ -0.61
COMMD1-203ENST00000444166 TANGO2Q6ICL3 276 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 NOTUMQ6P988 496 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 SLC7A14Q8TBB6 771 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 SLC7A3Q8WY07 619 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 ING5Q8WYH8 240 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 TMEM143Q96AN5 459 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 TCEANC2Q96MN5 208 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 PAAF1Q9BRP4 392 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 TTPALQ9BTX7 342 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 CSRNP2Q9H175 543 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 NXF3Q9H4D5 531 aaKnown RBP11.24□□□□□ -0.61
COMMD1-203ENST00000444166 AVENQ9NQS1 362 aaPredicted RBP11.24□□□□□ -0.61
COMMD1-203ENST00000444166 CACNG4Q9UBN1 327 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 POLIQ9UNA4 740 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 VWA8A3KMH1 1905 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 NBEAQ8NFP9 2946 aa11.24□□□□□ -0.61
COMMD1-203ENST00000444166 GREB1Q4ZG55 1949 aa11.23□□□□□ -0.61
COMMD1-203ENST00000444166 TADA2AO75478 443 aa11.23□□□□□ -0.61
COMMD1-203ENST00000444166 ERLIN2O94905 339 aa11.23□□□□□ -0.61
COMMD1-203ENST00000444166 PAPSS2O95340 614 aaPredicted RBP11.23□□□□□ -0.61
COMMD1-203ENST00000444166 ADD1P35611 737 aaKnown RBP11.23□□□□□ -0.61
COMMD1-203ENST00000444166 SATB1Q01826 763 aa11.23□□□□□ -0.61
COMMD1-203ENST00000444166 SRSF5Q13243 272 aaKnown RBP11.23□□□□□ -0.61
COMMD1-203ENST00000444166 RAB33AQ14088 237 aa11.23□□□□□ -0.61
COMMD1-203ENST00000444166 GAS6Q14393 721 aa11.23□□□□□ -0.61
COMMD1-203ENST00000444166 PSMD5Q16401 504 aa11.23□□□□□ -0.61
COMMD1-203ENST00000444166 AMHR2Q16671 573 aa11.23□□□□□ -0.61
COMMD1-203ENST00000444166 UVSSAQ2YD98 709 aa11.23□□□□□ -0.61
COMMD1-203ENST00000444166 RTL10Q7L3V2 364 aa11.23□□□□□ -0.61
COMMD1-203ENST00000444166 FERMT3Q86UX7 667 aa11.23□□□□□ -0.61
COMMD1-203ENST00000444166 IFNLR1Q8IU57 520 aaPredicted RBP11.23□□□□□ -0.61
COMMD1-203ENST00000444166 RNF149Q8NC42 400 aa11.23□□□□□ -0.61
COMMD1-203ENST00000444166 ETNPPLQ8TBG4 499 aa11.23□□□□□ -0.61
COMMD1-203ENST00000444166 BICD2Q8TD16 824 aa11.23□□□□□ -0.61
COMMD1-203ENST00000444166 ELSPBP1Q96BH3 223 aa11.23□□□□□ -0.61
COMMD1-203ENST00000444166 CPB2Q96IY4 423 aa11.23□□□□□ -0.61
COMMD1-203ENST00000444166 WRAP73Q9P2S5 460 aaPredicted RBP11.23□□□□□ -0.61
COMMD1-203ENST00000444166 NDRG2Q9UN36 371 aaKnown RBP11.23□□□□□ -0.61
COMMD1-203ENST00000444166 MRPS23Q9Y3D9 190 aaKnown RBP11.23□□□□□ -0.61
COMMD1-203ENST00000444166 PPME1Q9Y570 386 aa11.23□□□□□ -0.61
COMMD1-203ENST00000444166 GCN1Q92616 2671 aaKnown RBP11.22□□□□□ -0.61
COMMD1-203ENST00000444166 ITPR1Q14643 2758 aa11.22□□□□□ -0.61
COMMD1-203ENST00000444166 CYP3A7-CYP3A51PA0A087WV96 503 aa11.22□□□□□ -0.61
COMMD1-203ENST00000444166 KLF18A0A0U1RQI7 1052 aa11.22□□□□□ -0.61
COMMD1-203ENST00000444166 CHURC1-FNTBB4DL54 471 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms