RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 THEGQ9P2T0 379 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 PDS5AQ29RF7 1337 aaKnown RBP11.89□□□□□ -0.51
FN1-211ENST00000443816 EMSYQ7Z589 1322 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 ALS2CLQ60I27 953 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 SGMS1Q86VZ5 419 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 ERO1BQ86YB8 467 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 MFN1Q8IWA4 741 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 KCTD17Q8N5Z5 321 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 DPF3Q92784 378 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 TMEM39BQ9GZU3 492 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 PRMT7Q9NVM4 692 aaPredicted RBP11.89□□□□□ -0.51
FN1-211ENST00000443816 PRR12Q9ULL5 1215 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 TECPR2O15040 1411 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 REREQ9P2R6 1566 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 E9PMD0 336 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 PRPF4O43172 522 aaKnown RBP eCLIP11.89□□□□□ -0.51
FN1-211ENST00000443816 HSPA4LO95757 839 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 TMEM132BQ14DG7 1078 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 ACAD11Q709F0 780 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 SEPT5Q99719 369 aaPredicted RBP11.89□□□□□ -0.51
FN1-211ENST00000443816 MRPL40Q9NQ50 206 aaKnown RBP11.89□□□□□ -0.51
FN1-211ENST00000443816 TEKT2Q9UIF3 430 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 ARHGAP10A1A4S6 786 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 HNRNPCL2B2RXH8 293 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 KDM1AO60341 852 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 HNRNPCL1O60812 293 aaKnown RBP11.89□□□□□ -0.51
FN1-211ENST00000443816 MOCS2O96007 188 aaPredicted RBP11.89□□□□□ -0.51
FN1-211ENST00000443816 CCT5P48643 541 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 BFSP2Q13515 415 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 ARHGEF7Q14155 803 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 DCP1BQ8IZD4 617 aaKnown RBP11.89□□□□□ -0.51
FN1-211ENST00000443816 SCYL3Q8IZE3 742 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 UBE2Q2Q8WVN8 375 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 RAPGEF5Q92565 580 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 TMEM169Q96HH4 297 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 YME1L1Q96TA2 773 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 DRAP1Q14919 205 aaPredicted RBP11.89□□□□□ -0.51
FN1-211ENST00000443816 SGSM1Q2NKQ1 1148 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 MARCH10Q8NA82 808 aaPredicted RBP11.89□□□□□ -0.51
FN1-211ENST00000443816 FAM96AQ9H5X1 160 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 EML4Q9HC35 981 aaKnown RBP11.89□□□□□ -0.51
FN1-211ENST00000443816 DPP7Q9UHL4 492 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 ZNF197O14709 1029 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 TBX3O15119 743 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 DHX9Q08211 1270 aaKnown RBP11.89□□□□□ -0.51
FN1-211ENST00000443816 TAS2R42Q7RTR8 314 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 RASSF3Q86WH2 238 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 RHOT1Q8IXI2 618 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 CPS1P31327 1500 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 SUPT20HL2P0C7V6 817 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 SULT1E1P49888 294 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 ATP2C1P98194 919 aaPredicted RBP11.88□□□□□ -0.51
FN1-211ENST00000443816 EIF2B5Q13144 721 aaKnown RBP11.88□□□□□ -0.51
FN1-211ENST00000443816 RBBP7Q16576 425 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 C18orf8Q96DM3 657 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 UBA6A0AVT1 1052 aaPredicted RBP11.88□□□□□ -0.51
FN1-211ENST00000443816 ASMTLO95671 621 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 FGGP02679 453 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 ODC1P11926 461 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 CDC27P30260 824 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 KLHL38Q2WGJ6 581 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 MOV10L1Q9BXT6 1211 aaKnown RBP11.88□□□□□ -0.51
FN1-211ENST00000443816 PLEKHA5Q9HAU0 1116 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 IGSF9BQ9UPX0 1349 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 CYP2C9P11712 490 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 BCAR1P56945 870 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 GABPB1Q06547 395 aaPredicted RBP11.88□□□□□ -0.51
FN1-211ENST00000443816 TOB2Q14106 344 aaPredicted RBP11.88□□□□□ -0.51
FN1-211ENST00000443816 MGAT5BQ3V5L5 792 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 FSCBQ5H9T9 825 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 OR6P1Q8NGX9 317 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 MAML1Q92585 1016 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 CCDC138Q96M89 665 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 NEUROG2Q9H2A3 272 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 CATSPERBQ9H7T0 1116 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 DCCP43146 1447 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 COPEO14579 308 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 ATICP31939 592 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 ACBD5Q5T8D3 534 aaPredicted RBP11.88□□□□□ -0.51
FN1-211ENST00000443816 C11orf57Q6ZUT1 292 aaPredicted RBP11.88□□□□□ -0.51
FN1-211ENST00000443816 PPHLN1Q8NEY8 458 aaKnown RBP11.88□□□□□ -0.51
FN1-211ENST00000443816 TXLNGQ9NUQ3 528 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 FGFR1OP2Q9NVK5 253 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 WDR35Q9P2L0 1181 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 FTLP02792 175 aaPredicted RBP11.88□□□□□ -0.51
FN1-211ENST00000443816 RFC1P35251 1148 aaPredicted RBP11.88□□□□□ -0.51
FN1-211ENST00000443816 PNPLA4P41247 253 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 PREPLQ4J6C6 727 aaPredicted RBP11.88□□□□□ -0.51
FN1-211ENST00000443816 FAM117BQ6P1L5 589 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 GUF1Q8N442 669 aaKnown RBP11.88□□□□□ -0.51
FN1-211ENST00000443816 AGAP1Q9UPQ3 857 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 TCHHQ07283 1943 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 AP1M1Q9BXS5 423 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 GBA2Q9HCG7 927 aaPredicted RBP11.88□□□□□ -0.51
FN1-211ENST00000443816 SAYSD1Q9NPB0 183 aa11.88□□□□□ -0.51
FN1-211ENST00000443816 NBPF26B4DH59 902 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 PALMO75781 387 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 PDHBP11177 359 aa11.87□□□□□ -0.51
FN1-211ENST00000443816 VEGFAP15692 232 aaPredicted RBP11.87□□□□□ -0.51
FN1-211ENST00000443816 TMEM62Q0P6H9 643 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms