RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 ZBTB33Q86T24 672 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 THNSL1Q8IYQ7 743 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 SYCP3Q8IZU3 236 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 ACAP3Q96P50 834 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 GAD1Q99259 594 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 TMEM175Q9BSA9 504 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 STRA6Q9BX79 667 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 RNF39Q9H2S5 420 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 GOLPH3LQ9H4A5 285 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 EXOC1Q9NV70 894 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 SPG21Q9NZD8 308 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 TBC1D7Q9P0N9 293 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 PUF60Q9UHX1 559 aaKnown RBP11.85□□□□□ -0.51
HDAC6-211ENST00000443563 GDAQ9Y2T3 454 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 UBE4BO95155 1302 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-211ENST00000443563 RFXAPO00287 272 aa11.84□□□□□ -0.51
HDAC6-211ENST00000443563 OGTO15294 1046 aa11.84□□□□□ -0.51
HDAC6-211ENST00000443563 FGF18O76093 207 aa11.84□□□□□ -0.51
HDAC6-211ENST00000443563 ALDH2P05091 517 aa11.84□□□□□ -0.51
HDAC6-211ENST00000443563 THP07101 528 aa11.84□□□□□ -0.51
HDAC6-211ENST00000443563 HARSP12081 509 aaKnown RBP11.84□□□□□ -0.51
HDAC6-211ENST00000443563 SCNN1GP51170 649 aa11.84□□□□□ -0.51
HDAC6-211ENST00000443563 BCAR1P56945 870 aa11.84□□□□□ -0.51
HDAC6-211ENST00000443563 PLCB3Q01970 1234 aa11.84□□□□□ -0.51
HDAC6-211ENST00000443563 BMS1Q14692 1282 aaKnown RBP11.84□□□□□ -0.51
HDAC6-211ENST00000443563 FMR1NBQ8N0W7 255 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-211ENST00000443563 KLHL23Q8NBE8 558 aa11.84□□□□□ -0.51
HDAC6-211ENST00000443563 TMEM87AQ8NBN3 555 aa11.84□□□□□ -0.51
HDAC6-211ENST00000443563 MRPL38Q96DV4 380 aaKnown RBP11.84□□□□□ -0.51
HDAC6-211ENST00000443563 ZBTB45Q96K62 511 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-211ENST00000443563 ZFP42Q96MM3 310 aa11.84□□□□□ -0.51
HDAC6-211ENST00000443563 MSTO1Q9BUK6 570 aa11.84□□□□□ -0.51
HDAC6-211ENST00000443563 GBP3Q9H0R5 595 aa11.84□□□□□ -0.51
HDAC6-211ENST00000443563 BLZF1Q9H2G9 400 aa11.84□□□□□ -0.51
HDAC6-211ENST00000443563 NRDE2Q9H7Z3 1164 aa11.84□□□□□ -0.51
HDAC6-211ENST00000443563 KLK14Q9P0G3 267 aa11.84□□□□□ -0.51
HDAC6-211ENST00000443563 PLAGL2Q9UPG8 496 aa11.84□□□□□ -0.51
HDAC6-211ENST00000443563 LZTS1Q9Y250 596 aa11.84□□□□□ -0.51
HDAC6-211ENST00000443563 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-211ENST00000443563 MTCH2Q9Y6C9 303 aa11.84□□□□□ -0.51
HDAC6-211ENST00000443563 A0A0B4J269 797 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 ABLIM1O14639 778 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 LPXNO60711 386 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 RPN1P04843 607 aaKnown RBP11.83□□□□□ -0.52
HDAC6-211ENST00000443563 ITGB1P05556 798 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 CLTAP09496 248 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 MYBP10242 640 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 EHHADHQ08426 723 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 ADGRE1Q14246 886 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 HSP90AA2PQ14568 343 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-211ENST00000443563 TIGD5Q53EQ6 642 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 PDE12Q6L8Q7 609 aaKnown RBP11.83□□□□□ -0.52
HDAC6-211ENST00000443563 GRAMD1CQ8IYS0 662 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 SLC39A11Q8N1S5 342 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 PPP2R3CQ969Q6 453 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 TMEM169Q96HH4 297 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 TIGD1Q96MW7 591 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 TSPAN18Q96SJ8 248 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 PLEKHA5Q9HAU0 1116 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 ALG13Q9NP73 1137 aaKnown RBP11.83□□□□□ -0.52
HDAC6-211ENST00000443563 SLC38A7Q9NVC3 462 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 FAN1Q9Y2M0 1017 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 STYXL1Q9Y6J8 313 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 TRIP11Q15643 1979 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 PRUNE2Q8WUY3 3088 aa11.83□□□□□ -0.52
HDAC6-211ENST00000443563 PDCD11Q14690 1871 aaKnown RBP11.83□□□□□ -0.52
HDAC6-211ENST00000443563 MYO9BQ13459 2157 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 KIAA0391O15091 583 aaKnown RBP11.82□□□□□ -0.52
HDAC6-211ENST00000443563 GRM6O15303 877 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 DDHD2O94830 711 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 KIF20AO95235 890 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 LDHAP00338 332 aaKnown RBP11.82□□□□□ -0.52
HDAC6-211ENST00000443563 GALTP07902 379 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 GARTP22102 1010 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 CASP1P29466 404 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 OR1G1P47890 313 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 AFF1P51825 1210 aaKnown RBP11.82□□□□□ -0.52
HDAC6-211ENST00000443563 CASP5P51878 434 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 OSTNP61366 133 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 UBE2HP62256 183 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 SNRPFP62306 86 aaKnown RBP11.82□□□□□ -0.52
HDAC6-211ENST00000443563 POU5F1Q01860 360 aaKnown RBP11.82□□□□□ -0.52
HDAC6-211ENST00000443563 DSC1Q08554 894 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 TUSC3Q13454 348 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 ZNF280BQ86YH2 543 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 CD302Q8IX05 232 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 COLGALT2Q8IYK4 626 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 CEP120Q8N960 986 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 ENGASEQ8NFI3 743 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 MAFAQ8NHW3 353 aaPredicted RBP11.82□□□□□ -0.52
HDAC6-211ENST00000443563 ZNF507Q8TCN5 953 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 SPPL3Q8TCT6 385 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 POF1BQ8WVV4 589 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 POMGNT1Q8WZA1 660 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 UROC1Q96N76 676 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 COLEC11Q9BWP8 271 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 GTPBP4Q9BZE4 634 aaKnown RBP11.82□□□□□ -0.52
HDAC6-211ENST00000443563 RPF1Q9H9Y2 349 aaKnown RBP11.82□□□□□ -0.52
HDAC6-211ENST00000443563 RMND1Q9NWS8 449 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms