RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 ADCY6O43306 1168 aa6.24□□□□□ -1.41
VPS50-206ENST00000443443 RBP3P10745 1247 aa6.24□□□□□ -1.41
VPS50-206ENST00000443443 KRT4P19013 534 aa6.24□□□□□ -1.41
VPS50-206ENST00000443443 MGAT1P26572 445 aa6.24□□□□□ -1.41
VPS50-206ENST00000443443 CRHR1P34998 444 aa6.24□□□□□ -1.41
VPS50-206ENST00000443443 FAM189BP81408 668 aa6.24□□□□□ -1.41
VPS50-206ENST00000443443 SMN1Q16637 294 aaKnown RBP6.24□□□□□ -1.41
VPS50-206ENST00000443443 MFSD14BQ5SR56 506 aa6.24□□□□□ -1.41
VPS50-206ENST00000443443 MBNL2Q5VZF2 373 aaKnown RBP6.24□□□□□ -1.41
VPS50-206ENST00000443443 TICAM2Q86XR7 235 aa6.24□□□□□ -1.41
VPS50-206ENST00000443443 AFAP1L2Q8N4X5 818 aa6.24□□□□□ -1.41
VPS50-206ENST00000443443 FBXO18Q8NFZ0 1043 aa6.24□□□□□ -1.41
VPS50-206ENST00000443443 ATL2Q8NHH9 583 aa6.24□□□□□ -1.41
VPS50-206ENST00000443443 ZFP28Q8NHY6 868 aa6.24□□□□□ -1.41
VPS50-206ENST00000443443 WDR66Q8TBY9 1149 aa6.24□□□□□ -1.41
VPS50-206ENST00000443443 CEP95Q96GE4 821 aa6.24□□□□□ -1.41
VPS50-206ENST00000443443 SLC46A2Q9BY10 475 aa6.24□□□□□ -1.41
VPS50-206ENST00000443443 ACE2Q9BYF1 805 aaPredicted RBP6.24□□□□□ -1.41
VPS50-206ENST00000443443 DNAJC28Q9NX36 388 aa6.24□□□□□ -1.41
VPS50-206ENST00000443443 RNASET2O00584 256 aaKnown RBP6.23□□□□□ -1.41
VPS50-206ENST00000443443 NCR1O76036 304 aa6.23□□□□□ -1.41
VPS50-206ENST00000443443 NDUFA10O95299 355 aa6.23□□□□□ -1.41
VPS50-206ENST00000443443 ECHS1P30084 290 aa6.23□□□□□ -1.41
VPS50-206ENST00000443443 INHBEP58166 350 aa6.23□□□□□ -1.41
VPS50-206ENST00000443443 BMT2Q1RMZ1 405 aa6.23□□□□□ -1.41
VPS50-206ENST00000443443 MUM1Q2TAK8 710 aa6.23□□□□□ -1.41
VPS50-206ENST00000443443 MUM1L1Q5H9M0 696 aa6.23□□□□□ -1.41
VPS50-206ENST00000443443 FAM47AQ5JRC9 791 aa6.23□□□□□ -1.41
VPS50-206ENST00000443443 DRICH1Q6PGQ1 229 aaPredicted RBP6.23□□□□□ -1.41
VPS50-206ENST00000443443 LRRC55Q6ZSA7 311 aa6.23□□□□□ -1.41
VPS50-206ENST00000443443 LHFPL2Q6ZUX7 228 aa6.23□□□□□ -1.41
VPS50-206ENST00000443443 TSPEARQ8WU66 669 aa6.23□□□□□ -1.41
VPS50-206ENST00000443443 STON2Q8WXE9 905 aa6.23□□□□□ -1.41
VPS50-206ENST00000443443 CYP4F11Q9HBI6 524 aa6.23□□□□□ -1.41
VPS50-206ENST00000443443 AKIP1Q9NQ31 210 aa6.23□□□□□ -1.41
VPS50-206ENST00000443443 LPXNO60711 386 aa6.22□□□□□ -1.41
VPS50-206ENST00000443443 GCP02774 474 aa6.22□□□□□ -1.41
VPS50-206ENST00000443443 GSPT1P15170 499 aaKnown RBP6.22□□□□□ -1.41
VPS50-206ENST00000443443 FLT3LGP49771 235 aa6.22□□□□□ -1.41
VPS50-206ENST00000443443 PURAQ00577 322 aaKnown RBP6.22□□□□□ -1.41
VPS50-206ENST00000443443 SRSF2Q01130 221 aaKnown RBP6.22□□□□□ -1.41
VPS50-206ENST00000443443 NOMO1Q15155 1222 aa6.22□□□□□ -1.41
VPS50-206ENST00000443443 ADRM1Q16186 407 aa6.22□□□□□ -1.41
VPS50-206ENST00000443443 CSRP2Q16527 193 aa6.22□□□□□ -1.41
VPS50-206ENST00000443443 Q6ZPA2 131 aa6.22□□□□□ -1.41
VPS50-206ENST00000443443 RHOUQ7L0Q8 258 aa6.22□□□□□ -1.41
VPS50-206ENST00000443443 SYT12Q8IV01 421 aa6.22□□□□□ -1.41
VPS50-206ENST00000443443 SLC35B2Q8TB61 432 aa6.22□□□□□ -1.41
VPS50-206ENST00000443443 ZG16BQ96DA0 208 aa6.22□□□□□ -1.41
VPS50-206ENST00000443443 MYEOVQ96EZ4 313 aa6.22□□□□□ -1.41
VPS50-206ENST00000443443 ADI1Q9BV57 179 aa6.22□□□□□ -1.41
VPS50-206ENST00000443443 GREM2Q9H772 168 aa6.22□□□□□ -1.41
VPS50-206ENST00000443443 ANKFY1Q9P2R3 1169 aa6.22□□□□□ -1.41
VPS50-206ENST00000443443 ZNF185O15231 689 aa6.21□□□□□ -1.42
VPS50-206ENST00000443443 EYA4O95677 639 aa6.21□□□□□ -1.42
VPS50-206ENST00000443443 SPATA31D3P0C874 917 aa6.21□□□□□ -1.42
VPS50-206ENST00000443443 CLRN1P58418 232 aa6.21□□□□□ -1.42
VPS50-206ENST00000443443 RAP2BP61225 183 aa6.21□□□□□ -1.42
VPS50-206ENST00000443443 MST1LQ2TV78 715 aa6.21□□□□□ -1.42
VPS50-206ENST00000443443 ATXN7L2Q5T6C5 722 aaPredicted RBP6.21□□□□□ -1.42
VPS50-206ENST00000443443 SPATA31D4Q6ZUB0 917 aa6.21□□□□□ -1.42
VPS50-206ENST00000443443 Q6ZVL8 140 aa6.21□□□□□ -1.42
VPS50-206ENST00000443443 OR7D4Q8NG98 312 aa6.21□□□□□ -1.42
VPS50-206ENST00000443443 AGAP2Q99490 1192 aa6.21□□□□□ -1.42
VPS50-206ENST00000443443 TEX101Q9BY14 249 aa6.21□□□□□ -1.42
VPS50-206ENST00000443443 BCO1Q9HAY6 547 aa6.21□□□□□ -1.42
VPS50-206ENST00000443443 DMRT3Q9NQL9 472 aa6.21□□□□□ -1.42
VPS50-206ENST00000443443 USP15Q9Y4E8 981 aaPredicted RBP6.21□□□□□ -1.42
VPS50-206ENST00000443443 CENPVL1A0A0U1RR11 272 aa6.2□□□□□ -1.42
VPS50-206ENST00000443443 DIRC3C9JPN6 131 aa6.2□□□□□ -1.42
VPS50-206ENST00000443443 GPR39O43194 453 aa6.2□□□□□ -1.42
VPS50-206ENST00000443443 B3GALT2O43825 422 aa6.2□□□□□ -1.42
VPS50-206ENST00000443443 MARCH6O60337 910 aa6.2□□□□□ -1.42
VPS50-206ENST00000443443 PRKD3O94806 890 aa6.2□□□□□ -1.42
VPS50-206ENST00000443443 HLA-DOAP06340 250 aa6.2□□□□□ -1.42
VPS50-206ENST00000443443 RAP2AP10114 183 aa6.2□□□□□ -1.42
VPS50-206ENST00000443443 ZSCAN20P17040 1043 aaPredicted RBP6.2□□□□□ -1.42
VPS50-206ENST00000443443 ZFP36P26651 326 aaKnown RBP6.2□□□□□ -1.42
VPS50-206ENST00000443443 PDCD4Q53EL6 469 aaKnown RBP6.2□□□□□ -1.42
VPS50-206ENST00000443443 KRT26Q7Z3Y9 468 aa6.2□□□□□ -1.42
VPS50-206ENST00000443443 KCNK18Q7Z418 384 aa6.2□□□□□ -1.42
VPS50-206ENST00000443443 PLXDC1Q8IUK5 500 aa6.2□□□□□ -1.42
VPS50-206ENST00000443443 TRMT2AQ8IZ69 625 aaKnown RBP6.2□□□□□ -1.42
VPS50-206ENST00000443443 PQLC1Q8N2U9 271 aa6.2□□□□□ -1.42
VPS50-206ENST00000443443 LCORLQ8N3X6 602 aa6.2□□□□□ -1.42
VPS50-206ENST00000443443 COG1Q8WTW3 980 aa6.2□□□□□ -1.42
VPS50-206ENST00000443443 KRTAP9-8Q9BYQ0 159 aa6.2□□□□□ -1.42
VPS50-206ENST00000443443 SENP6Q9GZR1 1112 aaPredicted RBP6.2□□□□□ -1.42
VPS50-206ENST00000443443 RBM12Q9NTZ6 932 aaKnown RBP6.2□□□□□ -1.42
VPS50-206ENST00000443443 PCDHGA2Q9Y5H1 932 aa6.2□□□□□ -1.42
VPS50-206ENST00000443443 GAGE12BA1L429 117 aa6.19□□□□□ -1.42
VPS50-206ENST00000443443 GAGE12HA6NDE8 117 aa6.19□□□□□ -1.42
VPS50-206ENST00000443443 DRGXA6NNA5 263 aa6.19□□□□□ -1.42
VPS50-206ENST00000443443 CXorf49A8MYA2 514 aaPredicted RBP6.19□□□□□ -1.42
VPS50-206ENST00000443443 RHOBTB3O94955 611 aa6.19□□□□□ -1.42
VPS50-206ENST00000443443 SNRPA1P09661 255 aaKnown RBP6.19□□□□□ -1.42
VPS50-206ENST00000443443 OSMP13725 252 aa6.19□□□□□ -1.42
VPS50-206ENST00000443443 GPR3P46089 330 aa6.19□□□□□ -1.42
VPS50-206ENST00000443443 CHN2P52757 468 aa6.19□□□□□ -1.42
VPS50-206ENST00000443443 SLC5A3P53794 718 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms