RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 KIAA1024Q9UPX6 916 aa12.99□□□□□ -0.33
TTC28-203ENST00000442232 MYH11P35749 1972 aa12.98□□□□□ -0.33
TTC28-203ENST00000442232 CLUHO75153 1309 aa12.98□□□□□ -0.33
TTC28-203ENST00000442232 PHLPP2Q6ZVD8 1323 aa12.98□□□□□ -0.33
TTC28-203ENST00000442232 CCDC195A0A1B0GUA6 201 aa12.98□□□□□ -0.33
TTC28-203ENST00000442232 LAD1O00515 517 aa12.98□□□□□ -0.33
TTC28-203ENST00000442232 ACKR2O00590 384 aa12.98□□□□□ -0.33
TTC28-203ENST00000442232 RECQL4O94761 1208 aa12.98□□□□□ -0.33
TTC28-203ENST00000442232 AVPR2P30518 371 aa12.98□□□□□ -0.33
TTC28-203ENST00000442232 GBP2P32456 591 aaPredicted RBP12.98□□□□□ -0.33
TTC28-203ENST00000442232 NUBP1P53384 320 aa12.98□□□□□ -0.33
TTC28-203ENST00000442232 KIAA0319Q5VV43 1072 aa12.98□□□□□ -0.33
TTC28-203ENST00000442232 KRT79Q5XKE5 535 aa12.98□□□□□ -0.33
TTC28-203ENST00000442232 PDXDC1Q6P996 788 aa12.98□□□□□ -0.33
TTC28-203ENST00000442232 PALB2Q86YC2 1186 aa12.98□□□□□ -0.33
TTC28-203ENST00000442232 GLYCTKQ8IVS8 523 aa12.98□□□□□ -0.33
TTC28-203ENST00000442232 GPR65Q8IYL9 337 aa12.98□□□□□ -0.33
TTC28-203ENST00000442232 RNF168Q8IYW5 571 aaPredicted RBP12.98□□□□□ -0.33
TTC28-203ENST00000442232 SMG7Q92540 1137 aaKnown RBP12.98□□□□□ -0.33
TTC28-203ENST00000442232 PLEKHA4Q9H4M7 779 aa12.98□□□□□ -0.33
TTC28-203ENST00000442232 UPF2Q9HAU5 1272 aaKnown RBP12.98□□□□□ -0.33
TTC28-203ENST00000442232 DDX19AQ9NUU7 478 aaKnown RBP12.98□□□□□ -0.33
TTC28-203ENST00000442232 SNTG2Q9NY99 539 aa12.98□□□□□ -0.33
TTC28-203ENST00000442232 FNIP2Q9P278 1114 aa12.98□□□□□ -0.33
TTC28-203ENST00000442232 CASTOR2A6NHX0 329 aa12.97□□□□□ -0.33
TTC28-203ENST00000442232 F8W810 466 aa12.97□□□□□ -0.33
TTC28-203ENST00000442232 C1RP00736 705 aa12.97□□□□□ -0.33
TTC28-203ENST00000442232 VCPP55072 806 aaKnown RBP12.97□□□□□ -0.33
TTC28-203ENST00000442232 ELAVL2Q12926 359 aaKnown RBP12.97□□□□□ -0.33
TTC28-203ENST00000442232 PTGDRQ13258 359 aa12.97□□□□□ -0.33
TTC28-203ENST00000442232 DMP1Q13316 513 aaPredicted RBP12.97□□□□□ -0.33
TTC28-203ENST00000442232 PDIA5Q14554 519 aa12.97□□□□□ -0.33
TTC28-203ENST00000442232 NBR1Q14596 966 aa12.97□□□□□ -0.33
TTC28-203ENST00000442232 RABEP1Q15276 862 aa12.97□□□□□ -0.33
TTC28-203ENST00000442232 LIN9Q5TKA1 542 aa12.97□□□□□ -0.33
TTC28-203ENST00000442232 MCTP1Q6DN14 999 aa12.97□□□□□ -0.33
TTC28-203ENST00000442232 CEP57Q86XR8 500 aa12.97□□□□□ -0.33
TTC28-203ENST00000442232 BSNDQ8WZ55 320 aa12.97□□□□□ -0.33
TTC28-203ENST00000442232 B3GALT6Q96L58 329 aa12.97□□□□□ -0.33
TTC28-203ENST00000442232 TTPALQ9BTX7 342 aa12.97□□□□□ -0.33
TTC28-203ENST00000442232 GPR62Q9BZJ7 368 aa12.97□□□□□ -0.33
TTC28-203ENST00000442232 CCDC113Q9H0I3 377 aa12.97□□□□□ -0.33
TTC28-203ENST00000442232 CHST7Q9NS84 486 aa12.97□□□□□ -0.33
TTC28-203ENST00000442232 ZDHHC7Q9NXF8 308 aa12.97□□□□□ -0.33
TTC28-203ENST00000442232 FBXL21Q9UKT6 434 aa12.97□□□□□ -0.33
TTC28-203ENST00000442232 DNM3Q9UQ16 869 aa12.97□□□□□ -0.33
TTC28-203ENST00000442232 GDAQ9Y2T3 454 aa12.97□□□□□ -0.33
TTC28-203ENST00000442232 TRIP11Q15643 1979 aa12.96□□□□□ -0.33
TTC28-203ENST00000442232 CCDC169A6NNP5 214 aa12.96□□□□□ -0.33
TTC28-203ENST00000442232 K7ERI5 159 aa12.96□□□□□ -0.33
TTC28-203ENST00000442232 SPATA31D3P0C874 917 aa12.96□□□□□ -0.33
TTC28-203ENST00000442232 MYBP10242 640 aa12.96□□□□□ -0.33
TTC28-203ENST00000442232 RFX1P22670 979 aa12.96□□□□□ -0.33
TTC28-203ENST00000442232 U2AF2P26368 475 aaKnown RBP eCLIP12.96□□□□□ -0.33
TTC28-203ENST00000442232 YARSP54577 528 aaKnown RBP12.96□□□□□ -0.33
TTC28-203ENST00000442232 TDGQ13569 410 aa12.96□□□□□ -0.33
TTC28-203ENST00000442232 IER5LQ5T953 404 aa12.96□□□□□ -0.33
TTC28-203ENST00000442232 ATF7IP2Q5U623 682 aa12.96□□□□□ -0.33
TTC28-203ENST00000442232 FAM171A1Q5VUB5 890 aa12.96□□□□□ -0.33
TTC28-203ENST00000442232 DTHD1Q6ZMT9 781 aa12.96□□□□□ -0.33
TTC28-203ENST00000442232 SPATA31D4Q6ZUB0 917 aa12.96□□□□□ -0.33
TTC28-203ENST00000442232 GSTCDQ8NEC7 633 aa12.96□□□□□ -0.33
TTC28-203ENST00000442232 HASPINQ8TF76 798 aa12.96□□□□□ -0.33
TTC28-203ENST00000442232 RABGGTAQ92696 567 aa12.96□□□□□ -0.33
TTC28-203ENST00000442232 DRC1Q96MC2 740 aa12.96□□□□□ -0.33
TTC28-203ENST00000442232 KIFC3Q9BVG8 833 aa12.96□□□□□ -0.33
TTC28-203ENST00000442232 RHOBTB2Q9BYZ6 727 aa12.96□□□□□ -0.33
TTC28-203ENST00000442232 WDR6Q9NNW5 1121 aaKnown RBP12.96□□□□□ -0.33
TTC28-203ENST00000442232 TOPORSQ9NS56 1045 aaPredicted RBP12.96□□□□□ -0.33
TTC28-203ENST00000442232 IGSF9Q9P2J2 1179 aa12.96□□□□□ -0.33
TTC28-203ENST00000442232 CITO14578 2027 aa12.96□□□□□ -0.34
TTC28-203ENST00000442232 H3BQV1 296 aa12.95□□□□□ -0.34
TTC28-203ENST00000442232 TGM5O43548 720 aa12.95□□□□□ -0.34
TTC28-203ENST00000442232 RFPL2O75678 378 aa12.95□□□□□ -0.34
TTC28-203ENST00000442232 KIF4AO95239 1232 aa12.95□□□□□ -0.34
TTC28-203ENST00000442232 EFEMP2O95967 443 aa12.95□□□□□ -0.34
TTC28-203ENST00000442232 PDGFBP01127 241 aaPredicted RBP12.95□□□□□ -0.34
TTC28-203ENST00000442232 PRPHP41219 470 aa12.95□□□□□ -0.34
TTC28-203ENST00000442232 ZRSR1Q15695 479 aaKnown RBP12.95□□□□□ -0.34
TTC28-203ENST00000442232 PSMD5Q16401 504 aa12.95□□□□□ -0.34
TTC28-203ENST00000442232 ZNF568Q3ZCX4 644 aa12.95□□□□□ -0.34
TTC28-203ENST00000442232 IGSF22Q8N9C0 903 aa12.95□□□□□ -0.34
TTC28-203ENST00000442232 FLCNQ8NFG4 579 aa12.95□□□□□ -0.34
TTC28-203ENST00000442232 PIK3R5Q8WYR1 880 aa12.95□□□□□ -0.34
TTC28-203ENST00000442232 ATOH1Q92858 354 aaPredicted RBP12.95□□□□□ -0.34
TTC28-203ENST00000442232 CDK5RAP3Q96JB5 506 aa12.95□□□□□ -0.34
TTC28-203ENST00000442232 UROC1Q96N76 676 aa12.95□□□□□ -0.34
TTC28-203ENST00000442232 CCDC94Q9BW85 323 aaPredicted RBP12.95□□□□□ -0.34
TTC28-203ENST00000442232 MRPL4Q9BYD3 311 aaKnown RBP12.95□□□□□ -0.34
TTC28-203ENST00000442232 PCDHB6Q9Y5E3 794 aa12.95□□□□□ -0.34
TTC28-203ENST00000442232 TTLL13PA6NNM8 815 aa12.94□□□□□ -0.34
TTC28-203ENST00000442232 PTGESO14684 152 aa12.94□□□□□ -0.34
TTC28-203ENST00000442232 TRAPPC3O43617 180 aa12.94□□□□□ -0.34
TTC28-203ENST00000442232 RPL17P18621 184 aaKnown RBP12.94□□□□□ -0.34
TTC28-203ENST00000442232 PEX3P56589 373 aa12.94□□□□□ -0.34
TTC28-203ENST00000442232 TCF15Q12870 199 aa12.94□□□□□ -0.34
TTC28-203ENST00000442232 ECM1Q16610 540 aa12.94□□□□□ -0.34
TTC28-203ENST00000442232 C8orf34Q49A92 452 aa12.94□□□□□ -0.34
TTC28-203ENST00000442232 RILPL1Q5EBL4 403 aa12.94□□□□□ -0.34
TTC28-203ENST00000442232 EEF1DP3Q658K8 133 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms