RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 CEP128Q6ZU80 1094 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 ERMP1Q7Z2K6 904 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 PCYOX1LQ8NBM8 494 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 CTCFLQ8NI51 663 aaPredicted RBP11.32□□□□□ -0.6
SYNE2-206ENST00000441438 CEP76Q8TAP6 659 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 RGSL1A5PLK6 1076 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 SCNN1BP51168 640 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 INHBCP55103 352 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 C19orf57Q0VDD7 668 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 CETN1Q12798 172 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 HHIPL2Q6UWX4 724 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 SYNPOQ8N3V7 929 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 CHST13Q8NET6 341 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 OR6P1Q8NGX9 317 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 LILRB4Q8NHJ6 448 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 SLC10A4Q96EP9 437 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 PDLIM2Q96JY6 352 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 SMOC1Q9H4F8 434 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.32□□□□□ -0.6
SYNE2-206ENST00000441438 POLR2DO15514 142 aaKnown RBP11.32□□□□□ -0.6
SYNE2-206ENST00000441438 TRPA1O75762 1119 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 PIAS2O75928 621 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 POLBP06746 335 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 MYBP10242 640 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 CNTFP26441 200 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 OR1G1P47890 313 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 SLC14A1Q13336 389 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 C1orf53Q5VUE5 145 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 KLC3Q6P597 504 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 SPARTQ8N0X7 666 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 OR52K1Q8NGK4 314 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 ASB12Q8WXK4 309 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 SSH1Q8WYL5 1049 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 BAG5Q9UL15 447 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 TMEM5Q9Y2B1 443 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 MED16Q9Y2X0 877 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 SIPA1L3O60292 1781 aaPredicted RBP11.31□□□□□ -0.6
SYNE2-206ENST00000441438 FLT1P17948 1338 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 OR5F1O95221 314 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 OPN1MWP04001 364 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 OPN1MW2P0DN77 364 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 OPN1MW3P0DN78 364 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 DLATP10515 647 aaKnown RBP11.31□□□□□ -0.6
SYNE2-206ENST00000441438 CSF2RAP15509 400 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 TMPOP42166 694 aaKnown RBP11.31□□□□□ -0.6
SYNE2-206ENST00000441438 ABCB5Q2M3G0 1257 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 CABP7Q86V35 215 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 SLC30A5Q8TAD4 765 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 GPT2Q8TD30 523 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 TRPC4APQ8TEL6 797 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 HERVK_113Q902F9 699 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 TCF25Q9BQ70 676 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 BCL7BQ9BQE9 202 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 LLPHQ9BRT6 129 aaKnown RBP11.31□□□□□ -0.6
SYNE2-206ENST00000441438 CLK4Q9HAZ1 481 aaKnown RBP11.31□□□□□ -0.6
SYNE2-206ENST00000441438 SEMA3GQ9NS98 782 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 HSPBP1Q9NZL4 362 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 PPT2Q9UMR5 302 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 KRT87PA6NCN2 255 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 OR6C65A6NJZ3 312 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 EBAG9O00559 213 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 EVI5O60447 810 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 ASGR1P07306 291 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 RARGP13631 454 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 LPOP22079 712 aaPredicted RBP11.31□□□□□ -0.6
SYNE2-206ENST00000441438 DRG2P55039 364 aaKnown RBP11.31□□□□□ -0.6
SYNE2-206ENST00000441438 FKBP5Q13451 457 aaPredicted RBP11.31□□□□□ -0.6
SYNE2-206ENST00000441438 ARHGAP22Q7Z5H3 698 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 UNC5CLQ8IV45 518 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 ZDHHC15Q96MV8 337 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 KBTBD4Q9NVX7 518 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 ANO10Q9NW15 660 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 AASSQ9UDR5 926 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 TBC1D29Q9UFV1 150 aa11.31□□□□□ -0.6
SYNE2-206ENST00000441438 F6X3S4 739 aa11.3□□□□□ -0.6
SYNE2-206ENST00000441438 MEN1O00255 615 aa11.3□□□□□ -0.6
SYNE2-206ENST00000441438 GPR39O43194 453 aa11.3□□□□□ -0.6
SYNE2-206ENST00000441438 ADAMTS2O95450 1211 aa11.3□□□□□ -0.6
SYNE2-206ENST00000441438 ABCG1P45844 678 aa11.3□□□□□ -0.6
SYNE2-206ENST00000441438 PLCD1P51178 756 aa11.3□□□□□ -0.6
SYNE2-206ENST00000441438 GPC3P51654 580 aa11.3□□□□□ -0.6
SYNE2-206ENST00000441438 FYB2Q5VWT5 728 aa11.3□□□□□ -0.6
SYNE2-206ENST00000441438 ARHGAP36Q6ZRI8 547 aa11.3□□□□□ -0.6
SYNE2-206ENST00000441438 MRPL10Q7Z7H8 261 aaKnown RBP11.3□□□□□ -0.6
SYNE2-206ENST00000441438 ST13P5Q8NFI4 369 aaPredicted RBP11.3□□□□□ -0.6
SYNE2-206ENST00000441438 GAL3ST1Q99999 423 aa11.3□□□□□ -0.6
SYNE2-206ENST00000441438 ZNF446Q9NWS9 450 aa11.3□□□□□ -0.6
SYNE2-206ENST00000441438 ZMYND8Q9ULU4 1186 aaPredicted RBP11.3□□□□□ -0.6
SYNE2-206ENST00000441438 STRNO43815 780 aa11.3□□□□□ -0.6
SYNE2-206ENST00000441438 EPB41P11171 864 aaKnown RBP11.3□□□□□ -0.6
SYNE2-206ENST00000441438 ARF4P18085 180 aaPredicted RBP11.3□□□□□ -0.6
SYNE2-206ENST00000441438 MAPK3P27361 379 aaPredicted RBP11.3□□□□□ -0.6
SYNE2-206ENST00000441438 CRKP46108 304 aa11.3□□□□□ -0.6
SYNE2-206ENST00000441438 RRS1Q15050 365 aaKnown RBP11.3□□□□□ -0.6
SYNE2-206ENST00000441438 CWF19L2Q2TBE0 894 aaKnown RBP11.3□□□□□ -0.6
SYNE2-206ENST00000441438 OR7E24Q6IFN5 339 aa11.3□□□□□ -0.6
SYNE2-206ENST00000441438 CEP57Q86XR8 500 aa11.3□□□□□ -0.6
SYNE2-206ENST00000441438 CCDC138Q96M89 665 aa11.3□□□□□ -0.6
SYNE2-206ENST00000441438 MENTQ9BUN1 341 aa11.3□□□□□ -0.6
SYNE2-206ENST00000441438 MXD3Q9BW11 206 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms