RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 RFPL2O75678 378 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 PRKCBP05771 671 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 THP07101 528 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 SPATA31D3P0C874 917 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 NAMPTP43490 491 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 TRAPPC10P48553 1259 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 HMGN5P82970 282 aaKnown RBP12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 TUSC3Q13454 348 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 GNL2Q13823 731 aaKnown RBP12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 HSP90AA2PQ14568 343 aaPredicted RBP12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 PPP2R5AQ15172 486 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 TTC38Q5R3I4 469 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 HAUS3Q68CZ6 603 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 LILRA6Q6PI73 481 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 SPATA31D4Q6ZUB0 917 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 NOSTRINQ8IVI9 506 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 TMEM105Q8N8V8 129 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 DEPTORQ8TB45 409 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 ZNF707Q96C28 371 aaPredicted RBP12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 ZSCAN31Q96LW9 406 aaPredicted RBP12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 ADPGKQ9BRR6 497 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 PDZD7Q9H5P4 517 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 ZDHHC7Q9NXF8 308 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 SNTG2Q9NY99 539 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 KMT2EQ8IZD2 1858 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 CLUHO75153 1309 aa12.84□□□□□ -0.35
UBE2D4-204ENST00000440899 CFAP54Q96N23 3096 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 VPS13AQ96RL7 3174 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 H0Y858 1186 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 N4BP1O75113 896 aaKnown RBP12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 MYBP10242 640 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 GBP2P32456 591 aaPredicted RBP12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 CCT6AP40227 531 aaKnown RBP12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 FXR2P51116 673 aaKnown RBP eCLIP12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 EFNA5P52803 228 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 PDIA5Q14554 519 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 GLYCTKQ8IVS8 523 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 BSNDQ8WZ55 320 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 RABGGTAQ92696 567 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 KIFAP3Q92845 792 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 NXPE3Q969Y0 559 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 IFT74Q96LB3 600 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 PAAF1Q9BRP4 392 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 PRKD2Q9BZL6 878 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 CCDC113Q9H0I3 377 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 NT5C3AQ9H0P0 336 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 PIDD1Q9HB75 910 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 SH2B1Q9NRF2 756 aaPredicted RBP12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 FAM86C1Q9NVL1 165 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 EPS15L1Q9UBC2 864 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 LRWD1Q9UFC0 647 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 FBXL21Q9UKT6 434 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 NOL7Q9UMY1 257 aaKnown RBP12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 DUSP12Q9UNI6 340 aa12.83□□□□□ -0.36
UBE2D4-204ENST00000440899 DMDP11532 3685 aa12.82□□□□□ -0.36
UBE2D4-204ENST00000440899 CASTOR2A6NHX0 329 aa12.82□□□□□ -0.36
UBE2D4-204ENST00000440899 PTGESO14684 152 aa12.82□□□□□ -0.36
UBE2D4-204ENST00000440899 ST18O60284 1047 aa12.82□□□□□ -0.36
UBE2D4-204ENST00000440899 RECQL4O94761 1208 aa12.82□□□□□ -0.36
UBE2D4-204ENST00000440899 RPL17P18621 184 aaKnown RBP12.82□□□□□ -0.36
UBE2D4-204ENST00000440899 LIG1P18858 919 aa12.82□□□□□ -0.36
UBE2D4-204ENST00000440899 ELAVL2Q12926 359 aaKnown RBP12.82□□□□□ -0.36
UBE2D4-204ENST00000440899 DCAF4L1Q3SXM0 396 aa12.82□□□□□ -0.36
UBE2D4-204ENST00000440899 C4orf32Q8N8J7 132 aa12.82□□□□□ -0.36
UBE2D4-204ENST00000440899 FAM184AQ8NB25 1140 aa12.82□□□□□ -0.36
UBE2D4-204ENST00000440899 FLCNQ8NFG4 579 aa12.82□□□□□ -0.36
UBE2D4-204ENST00000440899 PIK3R5Q8WYR1 880 aa12.82□□□□□ -0.36
UBE2D4-204ENST00000440899 TTPALQ9BTX7 342 aa12.82□□□□□ -0.36
UBE2D4-204ENST00000440899 BHMT2Q9H2M3 363 aa12.82□□□□□ -0.36
UBE2D4-204ENST00000440899 CACNG4Q9UBN1 327 aa12.82□□□□□ -0.36
UBE2D4-204ENST00000440899 STK24Q9Y6E0 443 aa12.82□□□□□ -0.36
UBE2D4-204ENST00000440899 DENND4AQ7Z401 1863 aa12.82□□□□□ -0.36
UBE2D4-204ENST00000440899 WDR87Q6ZQQ6 2873 aa12.82□□□□□ -0.36
UBE2D4-204ENST00000440899 TDRD15B5MCY1 1934 aaKnown RBP12.82□□□□□ -0.36
UBE2D4-204ENST00000440899 PTPRZ1P23471 2315 aaPredicted RBP12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 PROB1E7EW31 1015 aa12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 ZMYND10O75800 440 aa12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 KIF4AO95239 1232 aa12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 AOC1P19801 751 aa12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 U2AF2P26368 475 aaKnown RBP eCLIP12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 NAB2Q15742 525 aa12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 RTP2Q5QGT7 225 aa12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 FAM171A1Q5VUB5 890 aa12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 EEF1DP3Q658K8 133 aa12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 PDXDC1Q6P996 788 aa12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 PRSS55Q6UWB4 352 aaPredicted RBP12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 APBB1IPQ7Z5R6 666 aaPredicted RBP12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 CEP57Q86XR8 500 aa12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 HASPINQ8TF76 798 aa12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 MYADMQ96S97 322 aa12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 CLSTN3Q9BQT9 956 aa12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 RAB34Q9BZG1 259 aa12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 KIAA1024Q9UPX6 916 aa12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 USP20Q9Y2K6 914 aa12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 GDAQ9Y2T3 454 aa12.81□□□□□ -0.36
UBE2D4-204ENST00000440899 C2orf16Q68DN1 1984 aa12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 RIF1Q5UIP0 2472 aaKnown RBP12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 K7ERI5 159 aa12.8□□□□□ -0.36
UBE2D4-204ENST00000440899 GFRA3O60609 400 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms