RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 KCNV1Q6PIU1 500 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 EXOC8Q8IYI6 725 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 TMEM161BQ8NDZ6 487 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 TMC2Q8TDI7 906 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 LMBR1Q8WVP7 490 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 CEP170P1Q96L14 293 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 OSBPL9Q96SU4 736 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.89□□□□□ -0.83
HDAC6-209ENST00000440653 PARD6BQ9BYG5 372 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 KIAA1586Q9HCI6 787 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 KMT5AQ9NQR1 393 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 GABBR1Q9UBS5 961 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 SEPT9Q9UHD8 586 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-209ENST00000440653 NAGPAQ9UK23 515 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 RIPK3Q9Y572 518 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 CACNA1BQ00975 2339 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 A0A087X0T9 212 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 DNM1LO00429 736 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 ENC1O14682 589 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 ZBTB39O15060 712 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 ZC3H11AO75152 810 aaKnown RBP eCLIP9.88□□□□□ -0.83
HDAC6-209ENST00000440653 CLSTN1O94985 981 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 OATP04181 439 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 H2AFZP0C0S5 128 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 FAM228BP0C875 321 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 ACTN1P12814 892 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 TNFRSF8P28908 595 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 ALDH5A1P51649 535 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-209ENST00000440653 PEX3P56589 373 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 NEDD9Q14511 834 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 PLS1Q14651 629 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 CFAP221Q4G0U5 840 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 EPC2Q52LR7 807 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 GLE1Q53GS7 698 aaKnown RBP9.88□□□□□ -0.83
HDAC6-209ENST00000440653 BRDTQ58F21 947 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-209ENST00000440653 FAM160B1Q5W0V3 765 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 PLA2G4FQ68DD2 849 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 ALKBH5Q6P6C2 394 aaKnown RBP9.88□□□□□ -0.83
HDAC6-209ENST00000440653 H2AFVQ71UI9 128 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 ANO5Q75V66 913 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 ENOSF1Q7L5Y1 443 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 IRF2BP2Q7Z5L9 587 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 ANKRD35Q8N283 1001 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 MMGT1Q8N4V1 131 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 TAF4BQ92750 862 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 NTPCRQ9BSD7 190 aaKnown RBP9.88□□□□□ -0.83
HDAC6-209ENST00000440653 MLXIPQ9HAP2 919 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 CYP26B1Q9NR63 512 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 ZNF446Q9NWS9 450 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 ARHGAP28Q9P2N2 729 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 ADAMTS1Q9UHI8 967 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 TBX20Q9UMR3 447 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 AGTPBP1Q9UPW5 1226 aa9.88□□□□□ -0.83
HDAC6-209ENST00000440653 ZNFX1Q9P2E3 1918 aaKnown RBP9.88□□□□□ -0.83
HDAC6-209ENST00000440653 EMSYQ7Z589 1322 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 DENND3A2RUS2 1198 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 HNRNPDLO14979 420 aaKnown RBP9.87□□□□□ -0.83
HDAC6-209ENST00000440653 SLC16A4O15374 487 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 ATP9AO75110 1047 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 ATG7O95352 703 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 PIGRP01833 764 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 TMEM253P0C7T8 217 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 TRIM49P0CI25 452 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 TRIM49CP0CI26 452 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 TGFB3P10600 412 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 NPTX2P47972 431 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 NAP1L1P55209 391 aaKnown RBP9.87□□□□□ -0.83
HDAC6-209ENST00000440653 TLE2Q04725 743 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 EMC2Q15006 297 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 SNX17Q15036 470 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 SNRNP35Q16560 246 aaKnown RBP9.87□□□□□ -0.83
HDAC6-209ENST00000440653 LONRF2Q1L5Z9 754 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 CBWD6Q4V339 395 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 CBWD3Q5JTY5 395 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 CBWD5Q5RIA9 395 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 ABHD15Q6UXT9 468 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 HDXQ7Z353 690 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 ZNF571Q7Z3V5 609 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-209ENST00000440653 CCDC60Q8IWA6 550 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-209ENST00000440653 AFAP1L1Q8TED9 768 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 RFFLQ8WZ73 363 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 USP6NLQ92738 828 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.87□□□□□ -0.835e-7■■■□□ 15.3
HDAC6-209ENST00000440653 SPATC1LQ9H0A9 340 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 NKX2-4Q9H2Z4 354 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 VIPAS39Q9H9C1 493 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 TMEM8AQ9HCN3 771 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 ZNF302Q9NR11 478 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 HDAC6Q9UBN7 1215 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 DDX20Q9UHI6 824 aaKnown RBP9.87□□□□□ -0.83
HDAC6-209ENST00000440653 DNAJC12Q9UKB3 198 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 ZFHX4Q86UP3 3567 aa9.87□□□□□ -0.83
HDAC6-209ENST00000440653 PRRC2BQ5JSZ5 2229 aaKnown RBP9.87□□□□□ -0.83
HDAC6-209ENST00000440653 IGKV6D-21A0A0A0MT36 114 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 A0A0U1RQG5 324 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-209ENST00000440653 CCDC169A6NNP5 214 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 ZNF862O60290 1169 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 RGS20O76081 388 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 UBA1P22314 1058 aaKnown RBP9.86□□□□□ -0.83
HDAC6-209ENST00000440653 KLRC1P26715 233 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms