RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 RNF14Q9UBS8 474 aa10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-202ENST00000439374 ASTN1O14525 1302 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 NHSL1Q5SYE7 1610 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 YDJCA8MPS7 323 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 TGFB1I1O43294 461 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 TNNI1P19237 187 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 RNF220Q5VTB9 566 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 SAMD7Q7Z3H4 446 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 FRMD5Q7Z6J6 570 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 DHX38Q92620 1227 aaKnown RBP10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 ACSF2Q96CM8 615 aaPredicted RBP10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 RAB17Q9H0T7 212 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 GANQ9H2C0 597 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 NKIRAS1Q9NYS0 192 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 CASZ1Q86V15 1759 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 MAP3K13O43283 966 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 ZBTB7AO95365 584 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 ETS2P15036 469 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 FERP16591 822 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 EPHB2P29323 1055 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 RFC5P40937 340 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 MMP14P50281 582 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 TUBP50607 506 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 NCALDP61601 193 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 MTMR1Q13613 665 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 RASA3Q14644 834 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 ZNF394Q53GI3 561 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 IRF2BP2Q7Z5L9 587 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 IQCDQ96DY2 449 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 TAAR1Q96RJ0 339 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 RMDN3Q96TC7 470 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 ANKFY1Q9P2R3 1169 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 RASAL2Q9UJF2 1139 aa10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 DDX60Q8IY21 1712 aaKnown RBP10.62□□□□□ -0.71
CDC42SE1-202ENST00000439374 A0A0G2JND7 137 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 C2orf71A6NGG8 1288 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 HNRNPDLO14979 420 aaKnown RBP10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 SOX5P35711 763 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 USP4Q13107 963 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 TMEM154Q6P9G4 183 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 NIM1KQ8IY84 436 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 LENG9Q96B70 501 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 CEP170P1Q96L14 293 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 PPP1R16BQ96T49 567 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 PITPNM3Q9BZ71 974 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 ANKRD36CQ5JPF3 1778 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 H0YGN5 161 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 PPFIA2O75334 1257 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 PSMC4P43686 418 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 MXI1P50539 228 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 CDK17Q00537 523 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 ORC2Q13416 577 aaPredicted RBP10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 RCN2Q14257 317 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 EDRF1Q3B7T1 1238 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 MTERF2Q49AM1 385 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 ERMARDQ5T6L9 678 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 DEFB132Q7Z7B7 95 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 CBWD2Q8IUF1 395 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 FITM2Q8N6M3 262 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 RPS6KC1Q96S38 1066 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 VPS37BQ9H9H4 285 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 USP15Q9Y4E8 981 aaPredicted RBP10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 NFS1Q9Y697 457 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 DPPA5A6NC42 116 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 BCRP11274 1271 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 EPHA7Q15375 998 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 SEL1L2Q5TEA6 688 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 PPP4R3CPQ6ZMV5 832 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 HAUS6Q7Z4H7 955 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 SPATA21Q7Z572 469 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 ZNF653Q96CK0 615 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 ERP44Q9BS26 406 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 PCDHA2Q9Y5H9 948 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 TIAM2Q8IVF5 1701 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 MYO3BQ8WXR4 1341 aa10.61□□□□□ -0.71
CDC42SE1-202ENST00000439374 PRLRP16471 622 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 DRP2Q13474 957 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 SETDB1Q15047 1291 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 FAM114A2Q9NRY5 505 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 STK32BQ9NY57 414 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 SEPT9Q9UHD8 586 aaPredicted RBP10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 TXNDC9O14530 226 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 SGPL1O95470 568 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 GAP43P17677 238 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 ITGB5P18084 799 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 HNRNPH3P31942 346 aaKnown RBP10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 PDE6CP51160 858 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 VAMP7P51809 220 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 OSTNP61366 133 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 IRX4P78413 519 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 SPIRE1Q08AE8 756 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 ZNF720Q7Z2F6 126 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 NLRX1Q86UT6 975 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 ARHGEF19Q8IW93 802 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 ZNF483Q8TF39 744 aaPredicted RBP10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 PBKQ96KB5 322 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 FAM213AQ9BRX8 229 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 SHCBP1LQ9BZQ2 653 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms