RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 PPP1R7Q15435 360 aa16.49■□□□□ 0.23
APP-208ENST00000439274 LONRF1Q17RB8 773 aa16.49■□□□□ 0.23
APP-208ENST00000439274 PHLDB2Q86SQ0 1253 aa16.49■□□□□ 0.23
APP-208ENST00000439274 FAM228AQ86W67 206 aa16.49■□□□□ 0.23
APP-208ENST00000439274 PARP9Q8IXQ6 854 aa16.49■□□□□ 0.23
APP-208ENST00000439274 DNAJC17Q9NVM6 304 aaKnown RBP16.49■□□□□ 0.23
APP-208ENST00000439274 YDJCA8MPS7 323 aa16.49■□□□□ 0.23
APP-208ENST00000439274 CHUKO15111 745 aa16.49■□□□□ 0.23
APP-208ENST00000439274 ACSL3O95573 720 aa16.49■□□□□ 0.23
APP-208ENST00000439274 CYP1A2P05177 515 aa16.49■□□□□ 0.23
APP-208ENST00000439274 GZMAP12544 262 aa16.49■□□□□ 0.23
APP-208ENST00000439274 ADSSP30520 456 aa16.49■□□□□ 0.23
APP-208ENST00000439274 LRRC14Q15048 493 aa16.49■□□□□ 0.23
APP-208ENST00000439274 PLA2G4FQ68DD2 849 aa16.49■□□□□ 0.23
APP-208ENST00000439274 CCDC91Q7Z6B0 441 aa16.49■□□□□ 0.23
APP-208ENST00000439274 C12orf56Q8IXR9 622 aa16.49■□□□□ 0.23
APP-208ENST00000439274 MGARPQ8TDB4 240 aa16.49■□□□□ 0.23
APP-208ENST00000439274 SHC3Q92529 594 aa16.49■□□□□ 0.23
APP-208ENST00000439274 TRIM7Q9C029 511 aa16.49■□□□□ 0.23
APP-208ENST00000439274 KDM4CQ9H3R0 1056 aa16.49■□□□□ 0.23
APP-208ENST00000439274 PASKQ96RG2 1323 aa16.49■□□□□ 0.23
APP-208ENST00000439274 TP73O15350 636 aa16.48■□□□□ 0.23
APP-208ENST00000439274 CREB1P16220 341 aa16.48■□□□□ 0.23
APP-208ENST00000439274 RWDD2BP57060 319 aa16.48■□□□□ 0.23
APP-208ENST00000439274 GTF2BQ00403 316 aa16.48■□□□□ 0.23
APP-208ENST00000439274 SNRNP35Q16560 246 aaKnown RBP16.48■□□□□ 0.23
APP-208ENST00000439274 NBPF9Q3BBW0 867 aa16.48■□□□□ 0.23
APP-208ENST00000439274 PIGWQ7Z7B1 504 aa16.48■□□□□ 0.23
APP-208ENST00000439274 ATG4AQ8WYN0 398 aa16.48■□□□□ 0.23
APP-208ENST00000439274 CDC42EP4Q9H3Q1 356 aaKnown RBP16.48■□□□□ 0.23
APP-208ENST00000439274 YY1AP1Q9H869 796 aa16.48■□□□□ 0.23
APP-208ENST00000439274 AAASQ9NRG9 546 aa16.48■□□□□ 0.23
APP-208ENST00000439274 CCPG1Q9ULG6 757 aa16.48■□□□□ 0.23
APP-208ENST00000439274 SYNPO2Q9UMS6 1093 aa16.48■□□□□ 0.23
APP-208ENST00000439274 ECEL1O95672 775 aa16.48■□□□□ 0.23
APP-208ENST00000439274 YWHABP31946 246 aaKnown RBP16.48■□□□□ 0.23
APP-208ENST00000439274 GBP1P32455 592 aa16.48■□□□□ 0.23
APP-208ENST00000439274 CHKAP35790 457 aa16.48■□□□□ 0.23
APP-208ENST00000439274 SLMAPQ14BN4 828 aa16.48■□□□□ 0.23
APP-208ENST00000439274 TRIP13Q15645 432 aaPredicted RBP16.48■□□□□ 0.23
APP-208ENST00000439274 FAM102BQ5T8I3 360 aa16.48■□□□□ 0.23
APP-208ENST00000439274 EXOC3L1Q86VI1 746 aa16.48■□□□□ 0.23
APP-208ENST00000439274 GPATCH11Q8N954 259 aa16.48■□□□□ 0.23
APP-208ENST00000439274 HELQQ8TDG4 1101 aa16.48■□□□□ 0.23
APP-208ENST00000439274 PSPC1Q8WXF1 523 aaKnown RBP16.48■□□□□ 0.23
APP-208ENST00000439274 SGSM3Q96HU1 749 aa16.48■□□□□ 0.23
APP-208ENST00000439274 GTF3C4Q9UKN8 822 aa16.48■□□□□ 0.23
APP-208ENST00000439274 TPX2Q9ULW0 747 aaKnown RBP16.48■□□□□ 0.23
APP-208ENST00000439274 ASAP2O43150 1006 aa16.47■□□□□ 0.23
APP-208ENST00000439274 MAPTP10636 758 aaKnown RBP16.47■□□□□ 0.23
APP-208ENST00000439274 QARSP47897 775 aaKnown RBP16.47■□□□□ 0.23
APP-208ENST00000439274 MFAP3P55082 362 aa16.47■□□□□ 0.23
APP-208ENST00000439274 KRT17Q04695 432 aa16.47■□□□□ 0.23
APP-208ENST00000439274 ALCAMQ13740 583 aa16.47■□□□□ 0.23
APP-208ENST00000439274 SNCBQ16143 134 aa16.47■□□□□ 0.23
APP-208ENST00000439274 CNGA2Q16280 664 aa16.47■□□□□ 0.23
APP-208ENST00000439274 TKFCQ3LXA3 575 aa16.47■□□□□ 0.23
APP-208ENST00000439274 TAS1R2Q8TE23 839 aa16.47■□□□□ 0.23
APP-208ENST00000439274 VTI1AQ96AJ9 217 aa16.47■□□□□ 0.23
APP-208ENST00000439274 SCLT1Q96NL6 688 aa16.47■□□□□ 0.23
APP-208ENST00000439274 NCAPGQ9BPX3 1015 aa16.47■□□□□ 0.23
APP-208ENST00000439274 HERPUD2Q9BSE4 406 aa16.47■□□□□ 0.23
APP-208ENST00000439274 TAOK3Q9H2K8 898 aa16.47■□□□□ 0.23
APP-208ENST00000439274 AGO4Q9HCK5 861 aaKnown RBP16.47■□□□□ 0.23
APP-208ENST00000439274 CHST7Q9NS84 486 aa16.47■□□□□ 0.23
APP-208ENST00000439274 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.47■□□□□ 0.23
APP-208ENST00000439274 CTNNAL1Q9UBT7 734 aa16.47■□□□□ 0.23
APP-208ENST00000439274 GGT7Q9UJ14 662 aa16.47■□□□□ 0.23
APP-208ENST00000439274 PPIP5K2O43314 1243 aa16.47■□□□□ 0.23
APP-208ENST00000439274 BAG6P46379 1132 aa16.47■□□□□ 0.23
APP-208ENST00000439274 HSD17B4P51659 736 aa16.47■□□□□ 0.23
APP-208ENST00000439274 MRPS9P82933 396 aaKnown RBP16.47■□□□□ 0.23
APP-208ENST00000439274 CDR2Q01850 454 aa16.47■□□□□ 0.23
APP-208ENST00000439274 XRCC4Q13426 336 aa16.47■□□□□ 0.23
APP-208ENST00000439274 C2CD6Q53TS8 623 aa16.47■□□□□ 0.23
APP-208ENST00000439274 SGO2Q562F6 1265 aa16.47■□□□□ 0.23
APP-208ENST00000439274 TNFAIP8L3Q5GJ75 292 aa16.47■□□□□ 0.23
APP-208ENST00000439274 DAB2IPQ5VWQ8 1189 aa16.47■□□□□ 0.23
APP-208ENST00000439274 LLGL2Q6P1M3 1020 aa16.47■□□□□ 0.23
APP-208ENST00000439274 CYFIP1Q7L576 1253 aa16.47■□□□□ 0.23
APP-208ENST00000439274 MORC4Q8TE76 937 aa16.47■□□□□ 0.23
APP-208ENST00000439274 TMEM109Q9BVC6 243 aa16.47■□□□□ 0.23
APP-208ENST00000439274 MLXIPLQ9NP71 852 aa16.47■□□□□ 0.23
APP-208ENST00000439274 HOMER2Q9NSB8 354 aa16.47■□□□□ 0.23
APP-208ENST00000439274 CD2APQ9Y5K6 639 aa16.47■□□□□ 0.23
APP-208ENST00000439274 ZNF536O15090 1300 aa16.46■□□□□ 0.23
APP-208ENST00000439274 ASTN2O75129 1339 aaPredicted RBP16.46■□□□□ 0.23
APP-208ENST00000439274 ZNFX1Q9P2E3 1918 aaKnown RBP16.46■□□□□ 0.23
APP-208ENST00000439274 GHRP10912 638 aa16.46■□□□□ 0.23
APP-208ENST00000439274 PDE6CP51160 858 aa16.46■□□□□ 0.23
APP-208ENST00000439274 CALCOCO2Q13137 446 aa16.46■□□□□ 0.23
APP-208ENST00000439274 FAM133BQ5BKY9 247 aaKnown RBP16.46■□□□□ 0.23
APP-208ENST00000439274 STYK1Q6J9G0 422 aa16.46■□□□□ 0.23
APP-208ENST00000439274 ANKS4BQ8N8V4 417 aa16.46■□□□□ 0.23
APP-208ENST00000439274 DDX1Q92499 740 aaKnown RBP16.46■□□□□ 0.23
APP-208ENST00000439274 PWWP2AQ96N64 755 aa16.46■□□□□ 0.23
APP-208ENST00000439274 PI4K2AQ9BTU6 479 aa16.46■□□□□ 0.23
APP-208ENST00000439274 TMOD2Q9NZR1 351 aa16.46■□□□□ 0.23
APP-208ENST00000439274 SAMD15Q9P1V8 674 aa16.46■□□□□ 0.23
APP-208ENST00000439274 ASIC3Q9UHC3 531 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms