RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 GTF2BQ00403 316 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 CST9Q5W186 159 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 EMBQ6PCB8 327 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 INTS8Q75QN2 995 aaKnown RBP14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 ARHGEF19Q8IW93 802 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 SLC35G2Q8TBE7 412 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 KIFAP3Q92845 792 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 PCYT2Q99447 389 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 SH3GL2Q99962 352 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 ST6GALNAC4Q9H4F1 302 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 ATP6V0A4Q9HBG4 840 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 PDLIM7Q9NR12 457 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 GDF3Q9NR23 364 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 MYO1FO00160 1098 aa14.96□□□□□ -0.01
PTCHD3-201ENST00000438700 ZBTB48P10074 688 aaPredicted RBP14.96□□□□□ -0.01
PTCHD3-201ENST00000438700 SUGP1Q8IWZ8 645 aaKnown RBP14.96□□□□□ -0.01
PTCHD3-201ENST00000438700 MCPH1Q8NEM0 835 aa14.96□□□□□ -0.01
PTCHD3-201ENST00000438700 PLEKHO2Q8TD55 490 aa14.96□□□□□ -0.01
PTCHD3-201ENST00000438700 SLC20A1Q8WUM9 679 aa14.96□□□□□ -0.01
PTCHD3-201ENST00000438700 NOC2LQ9Y3T9 749 aaKnown RBP14.96□□□□□ -0.01
PTCHD3-201ENST00000438700 ZEB2O60315 1214 aa14.96□□□□□ -0.02
PTCHD3-201ENST00000438700 BUB1BO60566 1050 aaPredicted RBP14.96□□□□□ -0.02
PTCHD3-201ENST00000438700 TCF7P36402 384 aaPredicted RBP14.96□□□□□ -0.02
PTCHD3-201ENST00000438700 USP8P40818 1118 aa14.96□□□□□ -0.02
PTCHD3-201ENST00000438700 SMTNP53814 917 aa14.96□□□□□ -0.02
PTCHD3-201ENST00000438700 TNNC1P63316 161 aa14.96□□□□□ -0.02
PTCHD3-201ENST00000438700 NT5DC3Q86UY8 548 aa14.96□□□□□ -0.02
PTCHD3-201ENST00000438700 XXYLT1Q8NBI6 393 aa14.96□□□□□ -0.02
PTCHD3-201ENST00000438700 TMEM161BQ8NDZ6 487 aa14.96□□□□□ -0.02
PTCHD3-201ENST00000438700 CASKIN2Q8WXE0 1202 aa14.96□□□□□ -0.02
PTCHD3-201ENST00000438700 CTNNBL1Q8WYA6 563 aaPredicted RBP14.96□□□□□ -0.02
PTCHD3-201ENST00000438700 PTPN18Q99952 460 aa14.96□□□□□ -0.02
PTCHD3-201ENST00000438700 SYT11Q9BT88 431 aa14.96□□□□□ -0.02
PTCHD3-201ENST00000438700 THAP2Q9H0W7 228 aa14.96□□□□□ -0.02
PTCHD3-201ENST00000438700 KMT5AQ9NQR1 393 aa14.96□□□□□ -0.02
PTCHD3-201ENST00000438700 GEMIN8Q9NWZ8 242 aaKnown RBP14.96□□□□□ -0.02
PTCHD3-201ENST00000438700 A0A0A6YYK5 440 aaPredicted RBP14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 TNFAIP3P21580 790 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 TNFRSF8P28908 595 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 ADORA2AP29274 412 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 GCLCP48506 637 aaPredicted RBP14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 MNAT1P51948 309 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 EMC2Q15006 297 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 C1orf220Q5T0J3 134 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 SLC17A8Q8NDX2 589 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 MORC4Q8TE76 937 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 KAT5Q92993 513 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 ARHGEF26Q96DR7 871 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 SAAL1Q96ER3 474 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 NCAPGQ9BPX3 1015 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 DDX47Q9H0S4 455 aaKnown RBP14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 POLR3FQ9H1D9 316 aaPredicted RBP14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 TMEM59LQ9UK28 342 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 INTUQ9ULD6 942 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 PGRMC1O00264 195 aaKnown RBP14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 ADRB2P07550 413 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 STAT5BP51692 787 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 POLGP54098 1239 aaPredicted RBP14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 PAK2Q13177 524 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 SLFN11Q7Z7L1 901 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 LMBR1Q8WVP7 490 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 SEPT1Q8WYJ6 367 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 RFFLQ8WZ73 363 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 CAVIN3Q969G5 261 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 PBKQ96KB5 322 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 ZIM3Q96PE6 472 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 C17orf75Q9HAS0 396 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 MORF4L1Q9UBU8 362 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 TBX20Q9UMR3 447 aa14.95□□□□□ -0.02
PTCHD3-201ENST00000438700 DENND3A2RUS2 1198 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 CCDC172P0C7W6 258 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 ITGA4P13612 1032 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 CETN1Q12798 172 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 HSDL1Q3SXM5 330 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 CELF3Q5SZQ8 465 aaKnown RBP14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 FAM160B1Q5W0V3 765 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 ARMCX2Q7L311 632 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 CBWD2Q8IUF1 395 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 SYCE1Q8N0S2 351 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 ACTRT1Q8TDG2 376 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 SPIRE2Q8WWL2 714 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 ELMO3Q96BJ8 720 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 CCDC127Q96BQ5 260 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 RUFY1Q96T51 708 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 PDGFCQ9NRA1 345 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 CAPN7Q9Y6W3 813 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 ADGRA3Q8IWK6 1321 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 TRPM7Q96QT4 1865 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 ASB14A6NK59 587 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 CES2O00748 559 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 TMEM253P0C7T8 217 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 HUNKP57058 714 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 MAP2K1Q02750 393 aaPredicted RBP14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 MYBPC2Q14324 1141 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 TMEM63BQ5T3F8 832 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 COPS5Q92905 334 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 PARK7Q99497 189 aaKnown RBP14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 ACP6Q9NPH0 428 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 SUCLA2Q9P2R7 463 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms