RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 ZNF568Q3ZCX4 644 aa12.53□□□□□ -0.4
SNHG3-202ENST00000437681 HABP4Q5JVS0 413 aaKnown RBP12.53□□□□□ -0.4
SNHG3-202ENST00000437681 FIBCD1Q8N539 461 aa12.53□□□□□ -0.4
SNHG3-202ENST00000437681 SCFD1Q8WVM8 642 aa12.53□□□□□ -0.4
SNHG3-202ENST00000437681 DACH1Q9UI36 760 aa12.53□□□□□ -0.4
SNHG3-202ENST00000437681 SFI1A8K8P3 1242 aa12.53□□□□□ -0.4
SNHG3-202ENST00000437681 HNRNPDLO14979 420 aaKnown RBP12.53□□□□□ -0.4
SNHG3-202ENST00000437681 EXTL3O43909 919 aa12.53□□□□□ -0.4
SNHG3-202ENST00000437681 FAM189A1O60320 539 aa12.53□□□□□ -0.4
SNHG3-202ENST00000437681 NPTXRO95502 500 aa12.53□□□□□ -0.4
SNHG3-202ENST00000437681 NMT1P30419 496 aaKnown RBP12.53□□□□□ -0.4
SNHG3-202ENST00000437681 LRRC63Q05C16 580 aa12.53□□□□□ -0.4
SNHG3-202ENST00000437681 MORC3Q14149 939 aa12.53□□□□□ -0.4
SNHG3-202ENST00000437681 NOMO2Q5JPE7 1267 aa12.53□□□□□ -0.4
SNHG3-202ENST00000437681 ACAP3Q96P50 834 aa12.53□□□□□ -0.4
SNHG3-202ENST00000437681 MKNK1Q9BUB5 465 aa12.53□□□□□ -0.4
SNHG3-202ENST00000437681 KIAA1468Q9P260 1216 aa12.53□□□□□ -0.4
SNHG3-202ENST00000437681 ANK1P16157 1881 aa12.52□□□□□ -0.4
SNHG3-202ENST00000437681 CITO14578 2027 aa12.52□□□□□ -0.4
SNHG3-202ENST00000437681 RPL13P26373 211 aaKnown RBP12.52□□□□□ -0.4
SNHG3-202ENST00000437681 ABI1Q8IZP0 508 aa12.52□□□□□ -0.4
SNHG3-202ENST00000437681 BICD1Q96G01 975 aa12.52□□□□□ -0.4
SNHG3-202ENST00000437681 DDX27Q96GQ7 796 aaKnown RBP12.52□□□□□ -0.4
SNHG3-202ENST00000437681 CHAMP1Q96JM3 812 aa12.52□□□□□ -0.4
SNHG3-202ENST00000437681 SNX27Q96L92 541 aa12.52□□□□□ -0.4
SNHG3-202ENST00000437681 TGS1Q96RS0 853 aaKnown RBP12.52□□□□□ -0.4
SNHG3-202ENST00000437681 TARS2Q9BW92 718 aaKnown RBP12.52□□□□□ -0.4
SNHG3-202ENST00000437681 DMAC2Q9NW81 257 aa12.52□□□□□ -0.4
SNHG3-202ENST00000437681 CPSF3Q9UKF6 684 aaKnown RBP12.52□□□□□ -0.4
SNHG3-202ENST00000437681 C2CD2Q9Y426 696 aa12.52□□□□□ -0.4
SNHG3-202ENST00000437681 B4GALT5O43286 388 aa12.52□□□□□ -0.41
SNHG3-202ENST00000437681 RPL9P32969 192 aaKnown RBP12.52□□□□□ -0.41
SNHG3-202ENST00000437681 PLCB3Q01970 1234 aa12.52□□□□□ -0.41
SNHG3-202ENST00000437681 AGMOQ6ZNB7 445 aa12.52□□□□□ -0.41
SNHG3-202ENST00000437681 USP37Q86T82 979 aa12.52□□□□□ -0.41
SNHG3-202ENST00000437681 MLKLQ8NB16 471 aa12.52□□□□□ -0.41
SNHG3-202ENST00000437681 KIAA0895Q8NCT3 520 aa12.52□□□□□ -0.41
SNHG3-202ENST00000437681 SPATA18Q8TC71 538 aa12.52□□□□□ -0.41
SNHG3-202ENST00000437681 YME1L1Q96TA2 773 aa12.52□□□□□ -0.41
SNHG3-202ENST00000437681 ZBED2Q9BTP6 218 aa12.52□□□□□ -0.41
SNHG3-202ENST00000437681 NUP62CLQ9H1M0 184 aa12.52□□□□□ -0.41
SNHG3-202ENST00000437681 KCTD10Q9H3F6 313 aa12.52□□□□□ -0.41
SNHG3-202ENST00000437681 ZHX3Q9H4I2 956 aa12.52□□□□□ -0.41
SNHG3-202ENST00000437681 BICDL2A1A5D9 508 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 PTMAP06454 111 aaKnown RBP12.51□□□□□ -0.41
SNHG3-202ENST00000437681 MYBP10242 640 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 DSC1Q08554 894 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 RAD51AP2Q09MP3 1159 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 SYCP3Q8IZU3 236 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 TIFAQ96CG3 184 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 CPB2Q96IY4 423 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 PPP1R16BQ96T49 567 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 KIFC3Q9BVG8 833 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 OXCT2Q9BYC2 517 aaPredicted RBP12.51□□□□□ -0.41
SNHG3-202ENST00000437681 PBX4Q9BYU1 374 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 BLZF1Q9H2G9 400 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 AGO2Q9UKV8 859 aaKnown RBP12.51□□□□□ -0.41
SNHG3-202ENST00000437681 PCDHA5Q9Y5H7 936 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 EDN1P05305 212 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 FAM163BP0C2L3 166 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 PRR29P0C7W0 189 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 FGFR4P22455 802 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 CACNB1Q02641 598 aaPredicted RBP12.51□□□□□ -0.41
SNHG3-202ENST00000437681 CLLU1OSQ5K130 101 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 CCDC183Q5T5S1 534 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 CENPPQ6IPU0 288 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 SLC39A4Q6P5W5 647 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 GPD1LQ8N335 351 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 FAXDC2Q96IV6 333 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 TSG101Q99816 390 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 EIF2AQ9BY44 585 aaKnown RBP12.51□□□□□ -0.41
SNHG3-202ENST00000437681 SSX2IPQ9Y2D8 614 aa12.51□□□□□ -0.41
SNHG3-202ENST00000437681 ARHGEF37A1IGU5 675 aa12.5□□□□□ -0.41
SNHG3-202ENST00000437681 SLC16A3O15427 465 aaKnown RBP12.5□□□□□ -0.41
SNHG3-202ENST00000437681 FGFR1OPO95684 399 aaKnown RBP12.5□□□□□ -0.41
SNHG3-202ENST00000437681 KLHL40Q2TBA0 621 aa12.5□□□□□ -0.41
SNHG3-202ENST00000437681 ZCWPW2Q504Y3 356 aa12.5□□□□□ -0.41
SNHG3-202ENST00000437681 EEF1DP3Q658K8 133 aa12.5□□□□□ -0.41
SNHG3-202ENST00000437681 PDXDC1Q6P996 788 aa12.5□□□□□ -0.41
SNHG3-202ENST00000437681 BRSK2Q8IWQ3 736 aa12.5□□□□□ -0.41
SNHG3-202ENST00000437681 ADSSL1Q8N142 457 aa12.5□□□□□ -0.41
SNHG3-202ENST00000437681 MSTO1Q9BUK6 570 aa12.5□□□□□ -0.41
SNHG3-202ENST00000437681 CWH43Q9H720 699 aa12.5□□□□□ -0.41
SNHG3-202ENST00000437681 MAN1B1Q9UKM7 699 aa12.5□□□□□ -0.41
SNHG3-202ENST00000437681 COL4A4P53420 1690 aaPredicted RBP12.5□□□□□ -0.41
SNHG3-202ENST00000437681 TTC26A0AVF1 554 aa12.5□□□□□ -0.41
SNHG3-202ENST00000437681 LINC00271P0C7V0 271 aa12.5□□□□□ -0.41
SNHG3-202ENST00000437681 HOXD13P35453 343 aa12.5□□□□□ -0.41
SNHG3-202ENST00000437681 STK4Q13043 487 aa12.5□□□□□ -0.41
SNHG3-202ENST00000437681 PNOCQ13519 176 aa12.5□□□□□ -0.41
SNHG3-202ENST00000437681 CEP63Q96MT8 703 aa12.5□□□□□ -0.41
SNHG3-202ENST00000437681 PPP1R10Q96QC0 940 aaKnown RBP12.5□□□□□ -0.41
SNHG3-202ENST00000437681 RPS6KC1Q96S38 1066 aa12.5□□□□□ -0.41
SNHG3-202ENST00000437681 C11orf84Q9BUA3 381 aaPredicted RBP12.5□□□□□ -0.41
SNHG3-202ENST00000437681 FAM124BQ9H5Z6 455 aaPredicted RBP12.5□□□□□ -0.41
SNHG3-202ENST00000437681 RPF1Q9H9Y2 349 aaKnown RBP12.5□□□□□ -0.41
SNHG3-202ENST00000437681 AGPAT3Q9NRZ7 376 aa12.5□□□□□ -0.41
SNHG3-202ENST00000437681 PCDHB12Q9Y5F1 795 aa12.5□□□□□ -0.41
SNHG3-202ENST00000437681 LINC01553A4QN01 128 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 ARL5CA6NH57 179 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms