RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 PCBP1Q15365 356 aaKnown RBP eCLIP16.6■□□□□ 0.25
SGCE-205ENST00000437425 KIAA0753Q2KHM9 967 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 TMEM63BQ5T3F8 832 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 GJB7Q6PEY0 223 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 MPZL3Q6UWV2 235 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 CRELD2Q6UXH1 353 aaPredicted RBP16.6■□□□□ 0.25
SGCE-205ENST00000437425 ZNF410Q86VK4 478 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 GPR88Q9GZN0 384 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 C1orf112Q9NSG2 853 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 TRIM10Q9UDY6 481 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 GNEQ9Y223 722 aaKnown RBP16.6■□□□□ 0.25
SGCE-205ENST00000437425 TNFSF13BQ9Y275 285 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 NRCAMQ92823 1304 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 MACROD2A1Z1Q3 448 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 TMEM88BA6NKF7 163 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 PROZP22891 400 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 ARHGAP44Q17R89 818 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 GJC2Q5T442 439 aaPredicted RBP16.6■□□□□ 0.25
SGCE-205ENST00000437425 ATF7IP2Q5U623 682 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 MTHFD1LQ6UB35 978 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 APBB1IPQ7Z5R6 666 aaPredicted RBP16.6■□□□□ 0.25
SGCE-205ENST00000437425 WDR49Q8IV35 697 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 FAM71AQ8IYT1 594 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 PPM1KQ8N3J5 372 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 LMBR1Q8WVP7 490 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 SHC3Q92529 594 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 RPGRIP1Q96KN7 1286 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 NLRP4Q96MN2 994 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 KATNAL1Q9BW62 490 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 AJAP1Q9UKB5 411 aaPredicted RBP16.6■□□□□ 0.25
SGCE-205ENST00000437425 ABT1Q9ULW3 272 aaKnown RBP16.6■□□□□ 0.25
SGCE-205ENST00000437425 NENFQ9UMX5 172 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 SAR1BQ9Y6B6 198 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 INO80B-WBP1J3KQ70 363 aa16.59■□□□□ 0.25
SGCE-205ENST00000437425 FOXN3O00409 490 aaPredicted RBP16.59■□□□□ 0.25
SGCE-205ENST00000437425 KPNA6O60684 536 aa16.59■□□□□ 0.25
SGCE-205ENST00000437425 ABL1P00519 1130 aa16.59■□□□□ 0.25
SGCE-205ENST00000437425 F2P00734 622 aa16.59■□□□□ 0.25
SGCE-205ENST00000437425 C4BPAP04003 597 aaKnown RBP16.59■□□□□ 0.25
SGCE-205ENST00000437425 H2AFZP0C0S5 128 aa16.59■□□□□ 0.25
SGCE-205ENST00000437425 ZNF286BP0CG31 522 aa16.59■□□□□ 0.25
SGCE-205ENST00000437425 ZNF865P0CJ78 1059 aaPredicted RBP16.59■□□□□ 0.25
SGCE-205ENST00000437425 TNFAIP3P21580 790 aa16.59■□□□□ 0.25
SGCE-205ENST00000437425 ACOT2P49753 483 aa16.59■□□□□ 0.25
SGCE-205ENST00000437425 CLCN3P51790 818 aa16.59■□□□□ 0.25
SGCE-205ENST00000437425 IGBP1P78318 339 aa16.59■□□□□ 0.25
SGCE-205ENST00000437425 MBTD1Q05BQ5 628 aa16.59■□□□□ 0.25
SGCE-205ENST00000437425 GRIK4Q16099 956 aa16.59■□□□□ 0.25
SGCE-205ENST00000437425 ENOX2Q16206 610 aaKnown RBP16.59■□□□□ 0.25
SGCE-205ENST00000437425 H2AFVQ71UI9 128 aa16.59■□□□□ 0.25
SGCE-205ENST00000437425 SRGAP1Q7Z6B7 1085 aa16.59■□□□□ 0.25
SGCE-205ENST00000437425 SLC30A5Q8TAD4 765 aa16.59■□□□□ 0.25
SGCE-205ENST00000437425 TRAPPC12Q8WVT3 735 aa16.59■□□□□ 0.25
SGCE-205ENST00000437425 UBXN4Q92575 508 aa16.59■□□□□ 0.25
SGCE-205ENST00000437425 INO80BQ9C086 356 aaPredicted RBP16.59■□□□□ 0.25
SGCE-205ENST00000437425 AP5M1Q9H0R1 490 aa16.59■□□□□ 0.25
SGCE-205ENST00000437425 GJD2Q9UKL4 321 aa16.59■□□□□ 0.25
SGCE-205ENST00000437425 AKT3Q9Y243 479 aa16.59■□□□□ 0.25
SGCE-205ENST00000437425 DYNC1LI2O43237 492 aaPredicted RBP16.58■□□□□ 0.24
SGCE-205ENST00000437425 IL18RAPO95256 599 aa16.58■□□□□ 0.24
SGCE-205ENST00000437425 TBXAS1P24557 533 aaPredicted RBP16.58■□□□□ 0.24
SGCE-205ENST00000437425 FCGRTP55899 365 aa16.58■□□□□ 0.24
SGCE-205ENST00000437425 BPIFB4P59827 614 aa16.58■□□□□ 0.24
SGCE-205ENST00000437425 CKAP4Q07065 602 aaKnown RBP16.58■□□□□ 0.24
SGCE-205ENST00000437425 TMEM132AQ24JP5 1023 aa16.58■□□□□ 0.24
SGCE-205ENST00000437425 TRAPPC11Q7Z392 1133 aa16.58■□□□□ 0.24
SGCE-205ENST00000437425 TLK2Q86UE8 772 aa16.58■□□□□ 0.24
SGCE-205ENST00000437425 ARHGEF19Q8IW93 802 aa16.58■□□□□ 0.24
SGCE-205ENST00000437425 DNAJC5GQ8N7S2 189 aa16.58■□□□□ 0.24
SGCE-205ENST00000437425 HELQQ8TDG4 1101 aa16.58■□□□□ 0.24
SGCE-205ENST00000437425 TAS1R2Q8TE23 839 aa16.58■□□□□ 0.24
SGCE-205ENST00000437425 ZBTB45Q96K62 511 aaPredicted RBP16.58■□□□□ 0.24
SGCE-205ENST00000437425 SYT11Q9BT88 431 aa16.58■□□□□ 0.24
SGCE-205ENST00000437425 CARD6Q9BX69 1037 aa16.58■□□□□ 0.24
SGCE-205ENST00000437425 IMPG2Q9BZV3 1241 aa16.58■□□□□ 0.24
SGCE-205ENST00000437425 HAPLN2Q9GZV7 340 aa16.58■□□□□ 0.24
SGCE-205ENST00000437425 PTPRHQ9HD43 1115 aa16.58■□□□□ 0.24
SGCE-205ENST00000437425 CNTNAP2Q9UHC6 1331 aa16.57■□□□□ 0.24
SGCE-205ENST00000437425 ZSWIM8A7E2V4 1837 aa16.57■□□□□ 0.24
SGCE-205ENST00000437425 DDX3XO00571 662 aaKnown RBP eCLIP16.57■□□□□ 0.242e-26■■■□□ 14.6
SGCE-205ENST00000437425 IGHA2P01877 340 aa16.57■□□□□ 0.24
SGCE-205ENST00000437425 MCF2P10911 925 aa16.57■□□□□ 0.24
SGCE-205ENST00000437425 TCP1P17987 556 aaKnown RBP16.57■□□□□ 0.24
SGCE-205ENST00000437425 PIK3CAP42336 1068 aa16.57■□□□□ 0.24
SGCE-205ENST00000437425 NAP1L1P55209 391 aaKnown RBP16.57■□□□□ 0.24
SGCE-205ENST00000437425 AMPD2Q01433 879 aa16.57■□□□□ 0.24
SGCE-205ENST00000437425 CRHR2Q13324 411 aa16.57■□□□□ 0.24
SGCE-205ENST00000437425 BIRC3Q13489 604 aa16.57■□□□□ 0.24
SGCE-205ENST00000437425 SEMA4DQ92854 862 aa16.57■□□□□ 0.24
SGCE-205ENST00000437425 FAXDC2Q96IV6 333 aa16.57■□□□□ 0.24
SGCE-205ENST00000437425 POP1Q99575 1024 aaKnown RBP16.57■□□□□ 0.24
SGCE-205ENST00000437425 AGPAT1Q99943 283 aa16.57■□□□□ 0.24
SGCE-205ENST00000437425 IFT122Q9HBG6 1241 aa16.57■□□□□ 0.24
SGCE-205ENST00000437425 PDE11AQ9HCR9 933 aa16.57■□□□□ 0.24
SGCE-205ENST00000437425 CPSF3Q9UKF6 684 aaKnown RBP16.57■□□□□ 0.24
SGCE-205ENST00000437425 DUSP10Q9Y6W6 482 aa16.57■□□□□ 0.24
SGCE-205ENST00000437425 ABLIM1O14639 778 aa16.56■□□□□ 0.24
SGCE-205ENST00000437425 FAM189A1O60320 539 aa16.56■□□□□ 0.24
SGCE-205ENST00000437425 TADA3O75528 432 aa16.56■□□□□ 0.24
SGCE-205ENST00000437425 GZMAP12544 262 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms