RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 CATSPERBQ9H7T0 1116 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 HERC5Q9UII4 1024 aaKnown RBP11.81□□□□□ -0.52
SCN4A-201ENST00000435607 A0A0G2JND7 137 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 PCSK1P29120 753 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 ORC2Q13416 577 aaPredicted RBP11.81□□□□□ -0.52
SCN4A-201ENST00000435607 SLC35F6Q8N357 371 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 SSH3Q8TE77 659 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 RIN2Q8WYP3 895 aaPredicted RBP11.81□□□□□ -0.52
SCN4A-201ENST00000435607 XPO6Q96QU8 1125 aaKnown RBP11.81□□□□□ -0.52
SCN4A-201ENST00000435607 CYTH2Q99418 400 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 UVRAGQ9P2Y5 699 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 PSMD14O00487 310 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 MAGEB2O15479 319 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 JAK1P23458 1154 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 ADORA1P30542 326 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 CYP2C19P33261 490 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 NPEPPSP55786 919 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 CATSPER1Q8NEC5 780 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 GOLPH3LQ9H4A5 285 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 ENTPD7Q9NQZ7 604 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 PARVAQ9NVD7 372 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 POLR3EQ9NVU0 708 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 RBAKQ9NYW8 714 aaPredicted RBP11.81□□□□□ -0.52
SCN4A-201ENST00000435607 PEX19P40855 299 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 KCNQ4P56696 695 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 AP2B1P63010 937 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 ALKBH5Q6P6C2 394 aaKnown RBP11.81□□□□□ -0.52
SCN4A-201ENST00000435607 PIGOQ8TEQ8 1089 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 NDST4Q9H3R1 872 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 SMYD3Q9H7B4 428 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 RASA4BC9J798 803 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 RASA4O43374 803 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 TYK2P29597 1187 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 EIF4A3P38919 411 aaKnown RBP11.8□□□□□ -0.52
SCN4A-201ENST00000435607 ANO5Q75V66 913 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 ENAHQ8N8S7 591 aaPredicted RBP11.8□□□□□ -0.52
SCN4A-201ENST00000435607 TMEM169Q96HH4 297 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 KLHL11Q9NVR0 708 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 ZBTB1Q9Y2K1 713 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 FAM135BQ49AJ0 1406 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 A0A087WUV0 522 aaPredicted RBP11.8□□□□□ -0.52
SCN4A-201ENST00000435607 FTCDO95954 541 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 TXNP10599 105 aaKnown RBP11.8□□□□□ -0.52
SCN4A-201ENST00000435607 PMS2P54278 862 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 FCGRTP55899 365 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 TMEM132DQ14C87 1099 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 FAM133BQ5BKY9 247 aaKnown RBP11.8□□□□□ -0.52
SCN4A-201ENST00000435607 LRRC8EQ6NSJ5 796 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 UGT3A1Q6NUS8 523 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 PID1Q7Z2X4 250 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.8□□□□□ -0.52
SCN4A-201ENST00000435607 TIPINQ9BVW5 301 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 DCDC2CA8MYV0 355 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 RPS6KA5O75582 802 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 FYNP06241 537 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 ITGA4P13612 1032 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 VAMP7P51809 220 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 KCNB1Q14721 858 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 COPS7BQ9H9Q2 264 aaPredicted RBP11.8□□□□□ -0.52
SCN4A-201ENST00000435607 VPS9D1Q9Y2B5 631 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 FHOD1Q9Y613 1164 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 SYNCRIPO60506 623 aaKnown RBP11.8□□□□□ -0.52
SCN4A-201ENST00000435607 GRK3P35626 688 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 ACTR2P61160 394 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 OTUD7AQ8TE49 926 aaPredicted RBP11.8□□□□□ -0.52
SCN4A-201ENST00000435607 VPS50Q96JG6 964 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 GPR63Q9BZJ6 419 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 DNAJC12Q9UKB3 198 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 H7C4K7 107 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 MEFVO15553 781 aaPredicted RBP11.8□□□□□ -0.52
SCN4A-201ENST00000435607 ALOX15P16050 662 aaPredicted RBP11.8□□□□□ -0.52
SCN4A-201ENST00000435607 TGM3Q08188 693 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 MGAT5BQ3V5L5 792 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.8□□□□□ -0.52
SCN4A-201ENST00000435607 ANKRD49Q8WVL7 239 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 IRF1P10914 325 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 GSPT1P15170 499 aaKnown RBP11.8□□□□□ -0.52
SCN4A-201ENST00000435607 PCYT1AP49585 367 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 POLD3Q15054 466 aaPredicted RBP11.8□□□□□ -0.52
SCN4A-201ENST00000435607 MMGT1Q8N4V1 131 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 KRT35Q92764 455 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 SYBUQ9NX95 663 aa11.8□□□□□ -0.52
SCN4A-201ENST00000435607 MYOM2P54296 1465 aa11.79□□□□□ -0.52
SCN4A-201ENST00000435607 GH1P01241 217 aa11.79□□□□□ -0.52
SCN4A-201ENST00000435607 NUP62P37198 522 aaPredicted RBP11.79□□□□□ -0.52
SCN4A-201ENST00000435607 SULT1E1P49888 294 aa11.79□□□□□ -0.52
SCN4A-201ENST00000435607 LAMC2Q13753 1193 aa11.79□□□□□ -0.52
SCN4A-201ENST00000435607 EZH2Q15910 746 aaKnown RBP11.79□□□□□ -0.52
SCN4A-201ENST00000435607 KRT77Q7Z794 578 aa11.79□□□□□ -0.52
SCN4A-201ENST00000435607 HIPK4Q8NE63 616 aa11.79□□□□□ -0.52
SCN4A-201ENST00000435607 TRIM8Q9BZR9 551 aa11.79□□□□□ -0.52
SCN4A-201ENST00000435607 SMARCAL1Q9NZC9 954 aa11.79□□□□□ -0.52
SCN4A-201ENST00000435607 PKD2L2Q9NZM6 624 aa11.79□□□□□ -0.52
SCN4A-201ENST00000435607 ATP11BQ9Y2G3 1177 aa11.79□□□□□ -0.52
SCN4A-201ENST00000435607 CTTNBP2Q8WZ74 1663 aa11.79□□□□□ -0.52
SCN4A-201ENST00000435607 GADD45BO75293 160 aaPredicted RBP11.79□□□□□ -0.52
SCN4A-201ENST00000435607 CDC25BP30305 580 aa11.79□□□□□ -0.52
SCN4A-201ENST00000435607 RBL2Q08999 1139 aa11.79□□□□□ -0.52
SCN4A-201ENST00000435607 CNTN1Q12860 1018 aa11.79□□□□□ -0.52
SCN4A-201ENST00000435607 C1orf146Q5VVC0 180 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms