RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 GRM5P41594 1212 aa17.82■□□□□ 0.44
SMPD4-207ENST00000435455 ADAM15Q13444 863 aa17.82■□□□□ 0.44
SMPD4-207ENST00000435455 SMC1AQ14683 1233 aaKnown RBP17.82■□□□□ 0.44
SMPD4-207ENST00000435455 LEXMQ3ZCV2 418 aa17.82■□□□□ 0.44
SMPD4-207ENST00000435455 AXDND1Q5T1B0 1012 aaPredicted RBP17.82■□□□□ 0.44
SMPD4-207ENST00000435455 DYMQ7RTS9 669 aa17.82■□□□□ 0.44
SMPD4-207ENST00000435455 TMEM173Q86WV6 379 aaPredicted RBP17.82■□□□□ 0.44
SMPD4-207ENST00000435455 FAM178BQ8IXR5 827 aa17.82■□□□□ 0.44
SMPD4-207ENST00000435455 VPS52Q8N1B4 723 aa17.82■□□□□ 0.44
SMPD4-207ENST00000435455 BICD1Q96G01 975 aa17.82■□□□□ 0.44
SMPD4-207ENST00000435455 ZBP1Q9H171 429 aa17.82■□□□□ 0.44
SMPD4-207ENST00000435455 TOPORSQ9NS56 1045 aaPredicted RBP17.82■□□□□ 0.44
SMPD4-207ENST00000435455 SEL1LQ9UBV2 794 aa17.82■□□□□ 0.44
SMPD4-207ENST00000435455 RCOR1Q9UKL0 485 aa17.82■□□□□ 0.44
SMPD4-207ENST00000435455 ZDHHC9Q9Y397 364 aa17.82■□□□□ 0.44
SMPD4-207ENST00000435455 BDP1A6H8Y1 2624 aa17.81■□□□□ 0.44
SMPD4-207ENST00000435455 MYMKA6NI61 221 aa17.81■□□□□ 0.44
SMPD4-207ENST00000435455 BMP1P13497 986 aa17.81■□□□□ 0.44
SMPD4-207ENST00000435455 GAP43P17677 238 aa17.81■□□□□ 0.44
SMPD4-207ENST00000435455 GTF2F1P35269 517 aaKnown RBP eCLIP17.81■□□□□ 0.447e-8■■□□□ 11.7
SMPD4-207ENST00000435455 KCNQ1P51787 676 aa17.81■□□□□ 0.44
SMPD4-207ENST00000435455 YARSP54577 528 aaKnown RBP17.81■□□□□ 0.44
SMPD4-207ENST00000435455 KRT85P78386 507 aa17.81■□□□□ 0.44
SMPD4-207ENST00000435455 NOLC1Q14978 699 aaKnown RBP eCLIP17.81■□□□□ 0.443e-9■□□□□ 10.1
SMPD4-207ENST00000435455 PUS10Q3MIT2 529 aaKnown RBP17.81■□□□□ 0.44
SMPD4-207ENST00000435455 SHC4Q6S5L8 630 aa17.81■□□□□ 0.44
SMPD4-207ENST00000435455 ZBTB33Q86T24 672 aa17.81■□□□□ 0.44
SMPD4-207ENST00000435455 RBM23Q86U06 439 aaKnown RBP17.81■□□□□ 0.44
SMPD4-207ENST00000435455 IQUBQ8NA54 791 aa17.81■□□□□ 0.44
SMPD4-207ENST00000435455 BCL7CQ8WUZ0 217 aaPredicted RBP17.81■□□□□ 0.44
SMPD4-207ENST00000435455 COLEC11Q9BWP8 271 aa17.81■□□□□ 0.44
SMPD4-207ENST00000435455 LRRC27Q9C0I9 530 aa17.81■□□□□ 0.44
SMPD4-207ENST00000435455 TBX20Q9UMR3 447 aa17.81■□□□□ 0.44
SMPD4-207ENST00000435455 PCDHA7Q9UN72 937 aa17.81■□□□□ 0.44
SMPD4-207ENST00000435455 PRG3Q9Y2Y8 225 aaPredicted RBP17.81■□□□□ 0.44
SMPD4-207ENST00000435455 TCF20Q9UGU0 1960 aaKnown RBP17.8■□□□□ 0.44
SMPD4-207ENST00000435455 VCANP13611 3396 aa17.8■□□□□ 0.44
SMPD4-207ENST00000435455 ABLIM1O14639 778 aa17.8■□□□□ 0.44
SMPD4-207ENST00000435455 PTGESO14684 152 aa17.8■□□□□ 0.44
SMPD4-207ENST00000435455 CLDN3O15551 220 aa17.8■□□□□ 0.44
SMPD4-207ENST00000435455 CXCL14O95715 111 aa17.8■□□□□ 0.44
SMPD4-207ENST00000435455 TUSC3Q13454 348 aa17.8■□□□□ 0.44
SMPD4-207ENST00000435455 DUSP6Q16828 381 aa17.8■□□□□ 0.44
SMPD4-207ENST00000435455 MRPL43Q8N983 215 aaKnown RBP17.8■□□□□ 0.44
SMPD4-207ENST00000435455 DNAJC19Q96DA6 116 aa17.8■□□□□ 0.44
SMPD4-207ENST00000435455 ST6GALNAC4Q9H4F1 302 aa17.8■□□□□ 0.44
SMPD4-207ENST00000435455 FAM13BQ9NYF5 915 aa17.8■□□□□ 0.44
SMPD4-207ENST00000435455 ANKFY1Q9P2R3 1169 aa17.8■□□□□ 0.44
SMPD4-207ENST00000435455 IRAK3Q9Y616 596 aa17.8■□□□□ 0.44
SMPD4-207ENST00000435455 TCHHQ07283 1943 aa17.8■□□□□ 0.44
SMPD4-207ENST00000435455 C2orf71A6NGG8 1288 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 HIDE1A8MVS5 230 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 H3BQ06 376 aaPredicted RBP17.79■□□□□ 0.44
SMPD4-207ENST00000435455 DLL1O00548 723 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 PIGRP01833 764 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 SRGAP2BP0DMP2 458 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 CTSAP10619 480 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 CA8P35219 290 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 LTBRP36941 435 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 MATR3P43243 847 aaKnown RBP eCLIP17.79■□□□□ 0.44
SMPD4-207ENST00000435455 NDUFV1P49821 464 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 LIG4P49917 911 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 GTF2BQ00403 316 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 AMPD3Q01432 767 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 MCL1Q07820 350 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 E2F4Q16254 413 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 RESP18Q5W5W9 173 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 SFR1Q86XK3 245 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 CEP120Q8N960 986 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 TMEM87AQ8NBN3 555 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 HVCN1Q96D96 273 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 ZBTB45Q96K62 511 aaPredicted RBP17.79■□□□□ 0.44
SMPD4-207ENST00000435455 ACAP3Q96P50 834 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 FIZ1Q96SL8 496 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 PYM1Q9BRP8 204 aaKnown RBP17.79■□□□□ 0.44
SMPD4-207ENST00000435455 COL25A1Q9BXS0 654 aaPredicted RBP17.79■□□□□ 0.44
SMPD4-207ENST00000435455 TNMDQ9H2S6 317 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 MAGEF1Q9HAY2 307 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 FAM50BQ9Y247 325 aa17.79■□□□□ 0.44
SMPD4-207ENST00000435455 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.78■□□□□ 0.44
SMPD4-207ENST00000435455 HNRNPDLO14979 420 aaKnown RBP17.78■□□□□ 0.44
SMPD4-207ENST00000435455 PER2O15055 1255 aa17.78■□□□□ 0.44
SMPD4-207ENST00000435455 LINC01565O15544 149 aa17.78■□□□□ 0.44
SMPD4-207ENST00000435455 HARSP12081 509 aaKnown RBP17.78■□□□□ 0.44
SMPD4-207ENST00000435455 IDEP14735 1019 aa17.78■□□□□ 0.44
SMPD4-207ENST00000435455 NMT1P30419 496 aaKnown RBP17.78■□□□□ 0.44
SMPD4-207ENST00000435455 OSTNP61366 133 aa17.78■□□□□ 0.44
SMPD4-207ENST00000435455 KYAT1Q16773 422 aa17.78■□□□□ 0.44
SMPD4-207ENST00000435455 MAP4K3Q8IVH8 894 aa17.78■□□□□ 0.44
SMPD4-207ENST00000435455 ADAMTS19Q8TE59 1207 aa17.78■□□□□ 0.44
SMPD4-207ENST00000435455 LEO1Q8WVC0 666 aaPredicted RBP17.78■□□□□ 0.44
SMPD4-207ENST00000435455 DHX58Q96C10 678 aa17.78■□□□□ 0.44
SMPD4-207ENST00000435455 SPATA32Q96LK8 384 aa17.78■□□□□ 0.44
SMPD4-207ENST00000435455 HERC2P3Q9BVR0 1158 aa17.78■□□□□ 0.44
SMPD4-207ENST00000435455 VN1R3Q9BXE9 311 aa17.78■□□□□ 0.44
SMPD4-207ENST00000435455 KBTBD4Q9NVX7 518 aa17.78■□□□□ 0.44
SMPD4-207ENST00000435455 MARCH5Q9NX47 278 aa17.78■□□□□ 0.44
SMPD4-207ENST00000435455 ADAM28Q9UKQ2 775 aa17.78■□□□□ 0.44
SMPD4-207ENST00000435455 POLR2DO15514 142 aaKnown RBP17.77■□□□□ 0.44
SMPD4-207ENST00000435455 TBX10O75333 385 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms