RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 AFF3P51826 1226 aaKnown RBP6.56□□□□□ -1.36
PTP4A1P3-201ENST00000433661 RAB1AP62820 205 aa6.56□□□□□ -1.36
PTP4A1P3-201ENST00000433661 POLD3Q15054 466 aaPredicted RBP6.56□□□□□ -1.36
PTP4A1P3-201ENST00000433661 OTUD7BQ6GQQ9 843 aa6.56□□□□□ -1.36
PTP4A1P3-201ENST00000433661 PPP4R4Q6NUP7 873 aa6.56□□□□□ -1.36
PTP4A1P3-201ENST00000433661 DAAM2Q86T65 1068 aa6.56□□□□□ -1.36
PTP4A1P3-201ENST00000433661 PQLC1Q8N2U9 271 aa6.56□□□□□ -1.36
PTP4A1P3-201ENST00000433661 ANKS1AQ92625 1134 aa6.56□□□□□ -1.36
PTP4A1P3-201ENST00000433661 GJA10Q969M2 543 aa6.56□□□□□ -1.36
PTP4A1P3-201ENST00000433661 CLPTM1LQ96KA5 538 aa6.56□□□□□ -1.36
PTP4A1P3-201ENST00000433661 SLC38A3Q99624 504 aa6.56□□□□□ -1.36
PTP4A1P3-201ENST00000433661 KIAA1683Q9H0B3 1180 aa6.56□□□□□ -1.36
PTP4A1P3-201ENST00000433661 WDCPQ9H6R7 721 aa6.56□□□□□ -1.36
PTP4A1P3-201ENST00000433661 SIDT1Q9NXL6 827 aaKnown RBP6.56□□□□□ -1.36
PTP4A1P3-201ENST00000433661 ING3Q9NXR8 418 aa6.56□□□□□ -1.36
PTP4A1P3-201ENST00000433661 RGS17Q9UGC6 210 aaPredicted RBP6.56□□□□□ -1.36
PTP4A1P3-201ENST00000433661 RIPOR2Q9Y4F9 1068 aa6.56□□□□□ -1.36
PTP4A1P3-201ENST00000433661 NR2E3Q9Y5X4 410 aa6.56□□□□□ -1.36
PTP4A1P3-201ENST00000433661 MROH6A6NGR9 719 aa6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 NT5C1B-RDH14C9J2C7 533 aa6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 FOXN3O00409 490 aaPredicted RBP6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 TYRP14679 529 aa6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 ALOX15P16050 662 aaPredicted RBP6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 ADSLP30566 484 aaPredicted RBP6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 FLT3LGP49771 235 aa6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 DUSP2Q05923 314 aa6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 KIAA2012Q0VF49 1180 aa6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 CNN3Q15417 329 aaKnown RBP6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 TBR1Q16650 682 aa6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 DACT2Q5SW24 774 aa6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 EMC10Q5UCC4 262 aa6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 RNF220Q5VTB9 566 aa6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 MCTP2Q6DN12 878 aa6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 SWSAP1Q6NVH7 229 aa6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 SMC5Q8IY18 1101 aa6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 CMTM4Q8IZR5 234 aa6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 PLBD2Q8NHP8 589 aa6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 MTFMTQ96DP5 389 aaKnown RBP6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 BHMT2Q9H2M3 363 aa6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 SEC61A2Q9H9S3 476 aa6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 TMEM140Q9NV12 185 aa6.55□□□□□ -1.36
PTP4A1P3-201ENST00000433661 MYBBP1AQ9BQG0 1328 aaKnown RBP6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 PMM2O15305 246 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 GPR32O75388 356 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 DDCP20711 480 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 MALP21145 153 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 BPIFB4P59827 614 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 FGL2Q14314 439 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 BRD3Q15059 726 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 FAM47AQ5JRC9 791 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 CCDC149Q6ZUS6 474 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 TOGARAM2Q6ZUX3 1019 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 ADGRE4PQ86SQ3 457 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 ZDHHC14Q8IZN3 488 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 MORC4Q8TE76 937 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 LRTOMTQ8WZ04 291 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 GPHA2Q96T91 129 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 ELAC2Q9BQ52 826 aaKnown RBP6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 NAA15Q9BXJ9 866 aaKnown RBP6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 C22orf23Q9BZE7 217 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 NUP62CLQ9H1M0 184 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 ATP6V0A4Q9HBG4 840 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 LMBRD1Q9NUN5 540 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 MOCS1Q9NZB8 636 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 PHTF1Q9UMS5 762 aa6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 RBM8AQ9Y5S9 174 aaKnown RBP6.54□□□□□ -1.36
PTP4A1P3-201ENST00000433661 ISM1B1AKI9 464 aa6.53□□□□□ -1.36
PTP4A1P3-201ENST00000433661 PJA2O43164 708 aa6.53□□□□□ -1.36
PTP4A1P3-201ENST00000433661 PHGDHO43175 533 aaKnown RBP6.53□□□□□ -1.36
PTP4A1P3-201ENST00000433661 SLC26A4O43511 780 aa6.53□□□□□ -1.36
PTP4A1P3-201ENST00000433661 MYF5P13349 255 aa6.53□□□□□ -1.36
PTP4A1P3-201ENST00000433661 ALDH5A1P51649 535 aaPredicted RBP6.53□□□□□ -1.36
PTP4A1P3-201ENST00000433661 AK2P54819 239 aa6.53□□□□□ -1.36
PTP4A1P3-201ENST00000433661 OS9Q13438 667 aaPredicted RBP6.53□□□□□ -1.36
PTP4A1P3-201ENST00000433661 KIAA0753Q2KHM9 967 aa6.53□□□□□ -1.36
PTP4A1P3-201ENST00000433661 OGFOD2Q6N063 350 aa6.53□□□□□ -1.36
PTP4A1P3-201ENST00000433661 SEM1Q6ZVN7 128 aa6.53□□□□□ -1.36
PTP4A1P3-201ENST00000433661 HEATR3Q7Z4Q2 680 aa6.53□□□□□ -1.36
PTP4A1P3-201ENST00000433661 FAM124AQ86V42 546 aa6.53□□□□□ -1.36
PTP4A1P3-201ENST00000433661 FAM90A1Q86YD7 464 aa6.53□□□□□ -1.36
PTP4A1P3-201ENST00000433661 PLXDC1Q8IUK5 500 aa6.53□□□□□ -1.36
PTP4A1P3-201ENST00000433661 ZGPATQ8N5A5 531 aaKnown RBP6.53□□□□□ -1.36
PTP4A1P3-201ENST00000433661 APIPQ96GX9 242 aa6.53□□□□□ -1.36
PTP4A1P3-201ENST00000433661 MYO1FO00160 1098 aa6.52□□□□□ -1.37
PTP4A1P3-201ENST00000433661 MATN2O00339 956 aa6.52□□□□□ -1.37
PTP4A1P3-201ENST00000433661 NOBOXO60393 691 aa6.52□□□□□ -1.37
PTP4A1P3-201ENST00000433661 IFIT2P09913 472 aaKnown RBP6.52□□□□□ -1.37
PTP4A1P3-201ENST00000433661 PEX2P28328 305 aa6.52□□□□□ -1.37
PTP4A1P3-201ENST00000433661 PCSK1P29120 753 aa6.52□□□□□ -1.37
PTP4A1P3-201ENST00000433661 GZMKP49863 264 aa6.52□□□□□ -1.37
PTP4A1P3-201ENST00000433661 SLURP1P55000 103 aa6.52□□□□□ -1.37
PTP4A1P3-201ENST00000433661 PER3P56645 1201 aa6.52□□□□□ -1.37
PTP4A1P3-201ENST00000433661 ATP2C1P98194 919 aaPredicted RBP6.52□□□□□ -1.37
PTP4A1P3-201ENST00000433661 MRPL49Q13405 166 aaKnown RBP6.52□□□□□ -1.37
PTP4A1P3-201ENST00000433661 SNAPC2Q13487 334 aa6.52□□□□□ -1.37
PTP4A1P3-201ENST00000433661 PLS1Q14651 629 aa6.52□□□□□ -1.37
PTP4A1P3-201ENST00000433661 KRT72Q14CN4 511 aa6.52□□□□□ -1.37
PTP4A1P3-201ENST00000433661 LLGL1Q15334 1064 aa6.52□□□□□ -1.37
PTP4A1P3-201ENST00000433661 KHDC1Q4VXA5 237 aaKnown RBP6.52□□□□□ -1.37
PTP4A1P3-201ENST00000433661 PRAMEF14Q5SWL7 426 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms