RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 ZNF707Q96C28 371 aaPredicted RBP15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 NACC1Q96RE7 527 aa15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 PIDD1Q9HB75 910 aa15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 CHST7Q9NS84 486 aa15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 FBXL21Q9UKT6 434 aa15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 VWA8A3KMH1 1905 aa15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 ADAM12O43184 909 aa15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 CDC25AP30304 524 aa15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 CCT6AP40227 531 aaKnown RBP15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 NTHL1P78549 312 aa15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 GRIK3Q13003 919 aa15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 HSP90AA2PQ14568 343 aaPredicted RBP15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 CDCA2Q69YH5 1023 aaPredicted RBP15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 CWF19L1Q69YN2 538 aaKnown RBP15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 SIX5Q8N196 739 aa15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 DEPTORQ8TB45 409 aa15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 POLR3CQ9BUI4 534 aaPredicted RBP15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 NFKBIZQ9BYH8 718 aa15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 FZD8Q9H461 694 aa15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 RXFP1Q9HBX9 757 aa15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 PRMT7Q9NVM4 692 aaPredicted RBP15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 CA14Q9ULX7 337 aa15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 USTQ9Y2C2 406 aa15.75■□□□□ 0.11
SMARCE1-205ENST00000431889 COL4A3Q01955 1670 aa15.74■□□□□ 0.11
SMARCE1-205ENST00000431889 CARNS1A5YM72 827 aa15.74■□□□□ 0.11
SMARCE1-205ENST00000431889 I3L4J1 428 aa15.74■□□□□ 0.11
SMARCE1-205ENST00000431889 STK25O00506 426 aa15.74■□□□□ 0.11
SMARCE1-205ENST00000431889 NPR3P17342 541 aa15.74■□□□□ 0.11
SMARCE1-205ENST00000431889 OSTNP61366 133 aa15.74■□□□□ 0.11
SMARCE1-205ENST00000431889 TDGQ13569 410 aa15.74■□□□□ 0.11
SMARCE1-205ENST00000431889 PCBP1Q15365 356 aaKnown RBP eCLIP15.74■□□□□ 0.11
SMARCE1-205ENST00000431889 USP41Q3LFD5 358 aa15.74■□□□□ 0.11
SMARCE1-205ENST00000431889 FAM171A1Q5VUB5 890 aa15.74■□□□□ 0.11
SMARCE1-205ENST00000431889 FAM184AQ8NB25 1140 aa15.74■□□□□ 0.11
SMARCE1-205ENST00000431889 MCPH1Q8NEM0 835 aa15.74■□□□□ 0.11
SMARCE1-205ENST00000431889 BHMT2Q9H2M3 363 aa15.74■□□□□ 0.11
SMARCE1-205ENST00000431889 GOLGA2P5Q9HBQ8 144 aa15.74■□□□□ 0.11
SMARCE1-205ENST00000431889 KIAA1024Q9UPX6 916 aa15.74■□□□□ 0.11
SMARCE1-205ENST00000431889 CLUHO75153 1309 aa15.74■□□□□ 0.11
SMARCE1-205ENST00000431889 DOCK8Q8NF50 2099 aa15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 GALR2O43603 387 aaPredicted RBP15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 GFRA3O60609 400 aa15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 XRCC6P12956 609 aaKnown RBP eCLIP15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 CYP11B2P19099 503 aa15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 RPA1P27694 616 aa15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 ZRSR1Q15695 479 aaKnown RBP15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 MAPK6Q16659 721 aa15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 NT5DC1Q5TFE4 455 aa15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 ASTLQ6HA08 431 aaPredicted RBP15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 C15orf39Q6ZRI6 1047 aa15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 TMEM130Q8N3G9 435 aa15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 C4orf32Q8N8J7 132 aa15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 CEP120Q8N960 986 aa15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 KIF2CQ99661 725 aa15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 CCDC113Q9H0I3 377 aa15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 NT5C3AQ9H0P0 336 aa15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 WDR6Q9NNW5 1121 aaKnown RBP15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 DDX19AQ9NUU7 478 aaKnown RBP15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 POLIQ9UNA4 740 aa15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 SSX2IPQ9Y2D8 614 aa15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 PCDHB6Q9Y5E3 794 aa15.73■□□□□ 0.11
SMARCE1-205ENST00000431889 E9PMD0 336 aa15.72■□□□□ 0.11
SMARCE1-205ENST00000431889 N4BP3O15049 544 aa15.72■□□□□ 0.11
SMARCE1-205ENST00000431889 TOB1P50616 345 aaPredicted RBP15.72■□□□□ 0.11
SMARCE1-205ENST00000431889 TUSC3Q13454 348 aa15.72■□□□□ 0.11
SMARCE1-205ENST00000431889 IL17AQ16552 155 aa15.72■□□□□ 0.11
SMARCE1-205ENST00000431889 PPP4R3CPQ6ZMV5 832 aa15.72■□□□□ 0.11
SMARCE1-205ENST00000431889 GRASPQ7Z6J2 395 aaPredicted RBP15.72■□□□□ 0.11
SMARCE1-205ENST00000431889 FBXO18Q8NFZ0 1043 aa15.72■□□□□ 0.11
SMARCE1-205ENST00000431889 ERMNQ8TAM6 284 aa15.72■□□□□ 0.11
SMARCE1-205ENST00000431889 PLIN2Q99541 437 aa15.72■□□□□ 0.11
SMARCE1-205ENST00000431889 PRRX2Q99811 253 aa15.72■□□□□ 0.11
SMARCE1-205ENST00000431889 RPP25Q9BUL9 199 aaKnown RBP15.72■□□□□ 0.11
SMARCE1-205ENST00000431889 CCDC169A6NNP5 214 aa15.71■□□□□ 0.11
SMARCE1-205ENST00000431889 SFI1A8K8P3 1242 aa15.71■□□□□ 0.11
SMARCE1-205ENST00000431889 CCL16O15467 120 aa15.71■□□□□ 0.11
SMARCE1-205ENST00000431889 THP07101 528 aa15.71■□□□□ 0.11
SMARCE1-205ENST00000431889 RAD51AP2Q09MP3 1159 aa15.71■□□□□ 0.11
SMARCE1-205ENST00000431889 NAB2Q15742 525 aa15.71■□□□□ 0.11
SMARCE1-205ENST00000431889 ASCL5Q7RTU5 278 aa15.71■□□□□ 0.11
SMARCE1-205ENST00000431889 SNX29Q8TEQ0 813 aa15.71■□□□□ 0.11
SMARCE1-205ENST00000431889 CLSTN3Q9BQT9 956 aa15.71■□□□□ 0.11
SMARCE1-205ENST00000431889 FOXP1Q9H334 677 aaPredicted RBP15.71■□□□□ 0.11
SMARCE1-205ENST00000431889 STK39Q9UEW8 545 aa15.71■□□□□ 0.11
SMARCE1-205ENST00000431889 LRWD1Q9UFC0 647 aa15.71■□□□□ 0.11
SMARCE1-205ENST00000431889 DUSP12Q9UNI6 340 aa15.71■□□□□ 0.11
SMARCE1-205ENST00000431889 KRBA1A5PL33 1030 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 ACKR2O00590 384 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 HARSP12081 509 aaKnown RBP15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 NAMPTP43490 491 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 CLCNKBP51801 687 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 PEX3P56589 373 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 PTGDRQ13258 359 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 PSMD5Q16401 504 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 FAM187BQ17R55 369 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 SPECC1Q5M775 1068 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 LILRA6Q6PI73 481 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 KCNK18Q7Z418 384 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 CMASQ8NFW8 434 aaPredicted RBP15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 LNX1Q8TBB1 728 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms