RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 TMEM132EQ6IEE7 984 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 HEATR3Q7Z4Q2 680 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 DAAM2Q86T65 1068 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 RHOT1Q8IXI2 618 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 PQLC1Q8N2U9 271 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 TP53I13Q8NBR0 393 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 OR10H5Q8NGA6 315 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 IL31RAQ8NI17 732 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 PHKBQ93100 1093 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 PGBD4Q96DM1 585 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 APIPQ96GX9 242 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 CLPTM1LQ96KA5 538 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 MRGPRX1Q96LB2 322 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 SGCZQ96LD1 299 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 UIMC1Q96RL1 719 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 ARPC5LQ9BPX5 153 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 KIAA1683Q9H0B3 1180 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 OR10A2Q9H208 303 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 KCNH6Q9H252 994 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 LANCL2Q9NS86 450 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 TDP1Q9NUW8 608 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 RGS17Q9UGC6 210 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 PCDHGB6Q9Y5F9 930 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 MYBBP1AQ9BQG0 1328 aaKnown RBP3.96□□□□□ -1.77
HMGB1P27-201ENST00000431429 ABHD14A-ACY1A0A1B0GW23 586 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 RASA4BC9J798 803 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 MATN2O00339 956 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 PHGDHO43175 533 aaKnown RBP3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 DAPK3O43293 454 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 RASA4O43374 803 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 TOX4O94842 621 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 JUNP05412 331 aaKnown RBP3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 GYPEP15421 78 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 ALOX15P16050 662 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 ZKSCAN1P17029 563 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 RPL17P18621 184 aaKnown RBP3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 PI3P19957 117 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 PRDX5P30044 214 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 PIK3CBP42338 1070 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 SP140Q13342 867 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 OS9Q13438 667 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 FGL2Q14314 439 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 USP10Q14694 798 aaKnown RBP3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 FAM83BQ5T0W9 1011 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 C10orf62Q5T681 223 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 ERAP2Q6P179 960 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 XRRA1Q6P2D8 792 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 CNKSR3Q6P9H4 555 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 USP30Q70CQ3 517 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 FRMD5Q7Z6J6 570 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 ADGRE4PQ86SQ3 457 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 PLXDC1Q8IUK5 500 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 RTKN2Q8IZC4 609 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 CARFQ8N187 725 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 TXNDC5Q8NBS9 432 aaKnown RBP3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 BHLHE22Q8NFJ8 381 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 ADAMTS17Q8TE56 1095 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 KCNN1Q92952 543 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 RAB24Q969Q5 203 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 SLC35A4Q96G79 324 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 MSLNLQ96KJ4 702 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 PWWP2AQ96N64 755 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 GPHA2Q96T91 129 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 DPH1Q9BZG8 443 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 NUP62CLQ9H1M0 184 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 SLC6A15Q9H2J7 730 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 WDCPQ9H6R7 721 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 L2HGDHQ9H9P8 463 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 NLRC4Q9NPP4 1024 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 LMBRD1Q9NUN5 540 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 PNPOQ9NVS9 261 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 FAM30AQ9NZY2 134 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 NTMQ9P121 344 aa3.96□□□□□ -1.78
HMGB1P27-201ENST00000431429 PRSS29PA6NIE9 313 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 F2RL2O00254 374 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 PQBP1O60828 265 aaKnown RBP3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 GPR32O75388 356 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 NPR1P16066 1061 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 SYN1P17600 705 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 DDCP20711 480 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 FPR1P21462 350 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 SARSP49591 514 aaKnown RBP3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 MEOX1P50221 254 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 DHX8Q14562 1220 aaKnown RBP3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 LONRF1Q17RB8 773 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 ZMAT1Q5H9K5 638 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 DACT2Q5SW24 774 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 PRAMEF14Q5SWL7 426 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 OTUD7BQ6GQQ9 843 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 TSHZ1Q6ZSZ6 1077 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 SEM1Q6ZVN7 128 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 NBPF11Q86T75 865 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 DPP9Q86TI2 863 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 ZNF761Q86XN6 746 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 ZDHHC14Q8IZN3 488 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 RNF152Q8N8N0 203 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 REPS2Q8NFH8 660 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 DEPTORQ8TB45 409 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 PARD3BQ8TEW8 1205 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 RABGGTAQ92696 567 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms