RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 MRPS6P82932 125 aaKnown RBP19.81■□□□□ 0.76
HMGN1-206ENST00000431390 PTK7Q13308 1070 aa19.81■□□□□ 0.76
HMGN1-206ENST00000431390 SNX17Q15036 470 aa19.81■□□□□ 0.76
HMGN1-206ENST00000431390 ZNF568Q3ZCX4 644 aa19.81■□□□□ 0.76
HMGN1-206ENST00000431390 FAM109BQ6ICB4 259 aaPredicted RBP19.81■□□□□ 0.76
HMGN1-206ENST00000431390 CRELD2Q6UXH1 353 aaPredicted RBP19.81■□□□□ 0.76
HMGN1-206ENST00000431390 PARD3BQ8TEW8 1205 aa19.81■□□□□ 0.76
HMGN1-206ENST00000431390 CELF4Q9BZC1 486 aaKnown RBP19.81■□□□□ 0.76
HMGN1-206ENST00000431390 CDHR5Q9HBB8 845 aa19.81■□□□□ 0.76
HMGN1-206ENST00000431390 STARD7Q9NQZ5 370 aa19.81■□□□□ 0.76
HMGN1-206ENST00000431390 PRKAG2Q9UGJ0 569 aa19.81■□□□□ 0.76
HMGN1-206ENST00000431390 GINS2Q9Y248 185 aa19.81■□□□□ 0.76
HMGN1-206ENST00000431390 PMM2O15305 246 aa19.8■□□□□ 0.76
HMGN1-206ENST00000431390 P4HA2O15460 535 aa19.8■□□□□ 0.76
HMGN1-206ENST00000431390 FAM189A1O60320 539 aa19.8■□□□□ 0.76
HMGN1-206ENST00000431390 GYPCP04921 128 aa19.8■□□□□ 0.76
HMGN1-206ENST00000431390 ARF4P18085 180 aaPredicted RBP19.8■□□□□ 0.76
HMGN1-206ENST00000431390 SFPQP23246 707 aaKnown RBP eCLIP19.8■□□□□ 0.76
HMGN1-206ENST00000431390 FMO5P49326 533 aa19.8■□□□□ 0.76
HMGN1-206ENST00000431390 NCBP1Q09161 790 aaKnown RBP19.8■□□□□ 0.76
HMGN1-206ENST00000431390 KCNMA1Q12791 1236 aa19.8■□□□□ 0.76
HMGN1-206ENST00000431390 PLEKHO2Q8TD55 490 aa19.8■□□□□ 0.76
HMGN1-206ENST00000431390 PDZD7Q9H5P4 517 aa19.8■□□□□ 0.76
HMGN1-206ENST00000431390 ATP11BQ9Y2G3 1177 aa19.8■□□□□ 0.76
HMGN1-206ENST00000431390 TRPV2Q9Y5S1 764 aa19.8■□□□□ 0.76
HMGN1-206ENST00000431390 TRIM49P0CI25 452 aa19.79■□□□□ 0.76
HMGN1-206ENST00000431390 TRIM49CP0CI26 452 aa19.79■□□□□ 0.76
HMGN1-206ENST00000431390 MCF2P10911 925 aa19.79■□□□□ 0.76
HMGN1-206ENST00000431390 AXLP30530 894 aa19.79■□□□□ 0.76
HMGN1-206ENST00000431390 RBL2Q08999 1139 aa19.79■□□□□ 0.76
HMGN1-206ENST00000431390 PSMD6Q15008 389 aa19.79■□□□□ 0.76
HMGN1-206ENST00000431390 EEF1DP3Q658K8 133 aa19.79■□□□□ 0.76
HMGN1-206ENST00000431390 CATSPER4Q7RTX7 472 aa19.79■□□□□ 0.76
HMGN1-206ENST00000431390 ZBTB33Q86T24 672 aa19.79■□□□□ 0.76
HMGN1-206ENST00000431390 CCDC155Q8N6L0 562 aa19.79■□□□□ 0.76
HMGN1-206ENST00000431390 PCMTD1Q96MG8 357 aaPredicted RBP19.79■□□□□ 0.76
HMGN1-206ENST00000431390 TTYH3Q9C0H2 523 aa19.79■□□□□ 0.76
HMGN1-206ENST00000431390 CDT1Q9H211 546 aa19.79■□□□□ 0.76
HMGN1-206ENST00000431390 A0A1B0GUA9 196 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 AKR1B15C9JRZ8 316 aaPredicted RBP19.78■□□□□ 0.76
HMGN1-206ENST00000431390 HARSP12081 509 aaKnown RBP19.78■□□□□ 0.76
HMGN1-206ENST00000431390 TRIM21P19474 475 aaKnown RBP19.78■□□□□ 0.76
HMGN1-206ENST00000431390 GTF2H1P32780 548 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 ACOT2P49753 483 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 DLG4P78352 724 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 POU5F1Q01860 360 aaKnown RBP19.78■□□□□ 0.76
HMGN1-206ENST00000431390 EXOC3L4Q17RC7 722 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 C1orf220Q5T0J3 134 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 ZNF697Q5TEC3 545 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 GBP6Q6ZN66 633 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 CNGA4Q8IV77 575 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 LRRC8AQ8IWT6 810 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 RBAKQ9NYW8 714 aaPredicted RBP19.78■□□□□ 0.76
HMGN1-206ENST00000431390 CDY2AQ9Y6F7 541 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 A0A1W2PQJ5 194 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 LRRIQ3A6PVS8 624 aaPredicted RBP19.78■□□□□ 0.76
HMGN1-206ENST00000431390 ARVCFO00192 962 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 CAND2O75155 1236 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 KLK7P49862 253 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 CLDN10P78369 228 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 MGAT3Q09327 533 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 KYAT1Q16773 422 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 APBB1IPQ7Z5R6 666 aaPredicted RBP19.78■□□□□ 0.76
HMGN1-206ENST00000431390 BRSK2Q8IWQ3 736 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 TC2NQ8N9U0 490 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 CACTINQ8WUQ7 758 aaKnown RBP19.78■□□□□ 0.76
HMGN1-206ENST00000431390 TMEM40Q8WWA1 233 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 WNT8BQ93098 351 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 CPB2Q96IY4 423 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 ADPGKQ9BRR6 497 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 EDEM3Q9BZQ6 932 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 MMRN2Q9H8L6 949 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 CPSF3Q9UKF6 684 aaKnown RBP19.78■□□□□ 0.76
HMGN1-206ENST00000431390 CAPN11Q9UMQ6 739 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 NOD1Q9Y239 953 aa19.78■□□□□ 0.76
HMGN1-206ENST00000431390 MFAP3LO75121 409 aa19.77■□□□□ 0.76
HMGN1-206ENST00000431390 CASP14P31944 242 aa19.77■□□□□ 0.76
HMGN1-206ENST00000431390 MYL7Q01449 175 aa19.77■□□□□ 0.76
HMGN1-206ENST00000431390 PPP3CAQ08209 521 aa19.77■□□□□ 0.76
HMGN1-206ENST00000431390 CETN1Q12798 172 aa19.77■□□□□ 0.76
HMGN1-206ENST00000431390 ARID5BQ14865 1188 aa19.77■□□□□ 0.76
HMGN1-206ENST00000431390 SHHQ15465 462 aa19.77■□□□□ 0.76
HMGN1-206ENST00000431390 DCAF4L1Q3SXM0 396 aa19.77■□□□□ 0.76
HMGN1-206ENST00000431390 CBWD6Q4V339 395 aa19.77■□□□□ 0.76
HMGN1-206ENST00000431390 CBWD3Q5JTY5 395 aa19.77■□□□□ 0.76
HMGN1-206ENST00000431390 CBWD5Q5RIA9 395 aa19.77■□□□□ 0.76
HMGN1-206ENST00000431390 ZBTB41Q5SVQ8 909 aa19.77■□□□□ 0.76
HMGN1-206ENST00000431390 NEK11Q8NG66 645 aa19.77■□□□□ 0.76
HMGN1-206ENST00000431390 CCDC127Q96BQ5 260 aa19.77■□□□□ 0.76
HMGN1-206ENST00000431390 CCDC51Q96ER9 411 aa19.77■□□□□ 0.76
HMGN1-206ENST00000431390 FNBP1Q96RU3 617 aa19.77■□□□□ 0.76
HMGN1-206ENST00000431390 PLCB1Q9NQ66 1216 aa19.77■□□□□ 0.76
HMGN1-206ENST00000431390 PRDM5Q9NQX1 630 aaPredicted RBP19.77■□□□□ 0.76
HMGN1-206ENST00000431390 TRMT13Q9NUP7 481 aaKnown RBP19.77■□□□□ 0.76
HMGN1-206ENST00000431390 AGPAT5Q9NUQ2 364 aa19.77■□□□□ 0.76
HMGN1-206ENST00000431390 EYSQ5T1H1 3165 aa19.76■□□□□ 0.75
HMGN1-206ENST00000431390 TTC26A0AVF1 554 aa19.76■□□□□ 0.75
HMGN1-206ENST00000431390 FGFR4P22455 802 aa19.76■□□□□ 0.75
HMGN1-206ENST00000431390 HOXA11P31270 313 aaPredicted RBP19.76■□□□□ 0.75
HMGN1-206ENST00000431390 SURF1Q15526 300 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms