RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 SMG8Q8ND04 991 aaKnown RBP16.72■□□□□ 0.27
PTCD1-204ENST00000430982 CHAMP1Q96JM3 812 aa16.72■□□□□ 0.27
PTCD1-204ENST00000430982 MRPL9Q9BYD2 267 aaKnown RBP16.72■□□□□ 0.27
PTCD1-204ENST00000430982 PDZD7Q9H5P4 517 aa16.72■□□□□ 0.27
PTCD1-204ENST00000430982 CWH43Q9H720 699 aa16.72■□□□□ 0.27
PTCD1-204ENST00000430982 RSAD1Q9HA92 442 aa16.72■□□□□ 0.27
PTCD1-204ENST00000430982 ODF2LQ9ULJ1 636 aa16.72■□□□□ 0.27
PTCD1-204ENST00000430982 RBM19Q9Y4C8 960 aaKnown RBP16.72■□□□□ 0.27
PTCD1-204ENST00000430982 HES2Q9Y543 173 aa16.72■□□□□ 0.27
PTCD1-204ENST00000430982 PCDHB12Q9Y5F1 795 aa16.72■□□□□ 0.27
PTCD1-204ENST00000430982 PHLPP2Q6ZVD8 1323 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 FNDC1Q4ZHG4 1894 aaPredicted RBP16.71■□□□□ 0.27
PTCD1-204ENST00000430982 ZNF292O60281 2723 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 A0A087X0B3 334 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 A0A1B0GUA9 196 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 FSCN2O14926 492 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 TBCAO75347 108 aaKnown RBP16.71■□□□□ 0.27
PTCD1-204ENST00000430982 OFD1O75665 1012 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 EDN1P05305 212 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 LAG3P18627 525 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 KRT85P78386 507 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 GIT2Q14161 759 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 NOMO2Q5JPE7 1267 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 SHC4Q6S5L8 630 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 SV2BQ7L1I2 683 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 HACE1Q8IYU2 909 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 COLGALT1Q8NBJ5 622 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 URGCPQ8TCY9 931 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 SPIRE2Q8WWL2 714 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 RNF39Q9H2S5 420 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 TMEM134Q9H6X4 195 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 TLE6Q9H808 572 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 LARSQ9P2J5 1176 aaKnown RBP16.71■□□□□ 0.27
PTCD1-204ENST00000430982 ARHGAP28Q9P2N2 729 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 KCNG1Q9UIX4 513 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 PCDHA7Q9UN72 937 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 ATP6V1DQ9Y5K8 247 aa16.71■□□□□ 0.27
PTCD1-204ENST00000430982 RNASELQ05823 741 aaKnown RBP16.7■□□□□ 0.26
PTCD1-204ENST00000430982 AXDND1Q5T1B0 1012 aaPredicted RBP16.7■□□□□ 0.26
PTCD1-204ENST00000430982 NT5DC1Q5TFE4 455 aa16.7■□□□□ 0.26
PTCD1-204ENST00000430982 ATF7IP2Q5U623 682 aa16.7■□□□□ 0.26
PTCD1-204ENST00000430982 EEF1DP3Q658K8 133 aa16.7■□□□□ 0.26
PTCD1-204ENST00000430982 DYMQ7RTS9 669 aa16.7■□□□□ 0.26
PTCD1-204ENST00000430982 THNSL1Q8IYQ7 743 aa16.7■□□□□ 0.26
PTCD1-204ENST00000430982 MYCT1Q8N699 235 aa16.7■□□□□ 0.26
PTCD1-204ENST00000430982 ADPGKQ9BRR6 497 aa16.7■□□□□ 0.26
PTCD1-204ENST00000430982 NXF3Q9H4D5 531 aaKnown RBP16.7■□□□□ 0.26
PTCD1-204ENST00000430982 PARVGQ9HBI0 331 aa16.7■□□□□ 0.26
PTCD1-204ENST00000430982 UBN1Q9NPG3 1134 aa16.7■□□□□ 0.26
PTCD1-204ENST00000430982 RCOR1Q9UKL0 485 aa16.7■□□□□ 0.26
PTCD1-204ENST00000430982 MYH15Q9Y2K3 1946 aa16.69■□□□□ 0.26
PTCD1-204ENST00000430982 PER2O15055 1255 aa16.69■□□□□ 0.26
PTCD1-204ENST00000430982 AKAP5P24588 427 aa16.69■□□□□ 0.26
PTCD1-204ENST00000430982 PBX3P40426 434 aa16.69■□□□□ 0.26
PTCD1-204ENST00000430982 STRN3Q13033 797 aa16.69■□□□□ 0.26
PTCD1-204ENST00000430982 SYCE2Q6PIF2 218 aa16.69■□□□□ 0.26
PTCD1-204ENST00000430982 TAS1R3Q7RTX0 852 aa16.69■□□□□ 0.26
PTCD1-204ENST00000430982 TMEM105Q8N8V8 129 aa16.69■□□□□ 0.26
PTCD1-204ENST00000430982 RSPH1Q8WYR4 309 aa16.69■□□□□ 0.26
PTCD1-204ENST00000430982 DHX58Q96C10 678 aa16.69■□□□□ 0.26
PTCD1-204ENST00000430982 SPATA32Q96LK8 384 aa16.69■□□□□ 0.26
PTCD1-204ENST00000430982 ZNF558Q96NG5 402 aa16.69■□□□□ 0.26
PTCD1-204ENST00000430982 NTPCRQ9BSD7 190 aaKnown RBP16.69■□□□□ 0.26
PTCD1-204ENST00000430982 MRPL4Q9BYD3 311 aaKnown RBP16.69■□□□□ 0.26
PTCD1-204ENST00000430982 GBP3Q9H0R5 595 aa16.69■□□□□ 0.26
PTCD1-204ENST00000430982 TBC1D13Q9NVG8 400 aa16.69■□□□□ 0.26
PTCD1-204ENST00000430982 FAM13BQ9NYF5 915 aa16.69■□□□□ 0.26
PTCD1-204ENST00000430982 PARP2Q9UGN5 583 aa16.69■□□□□ 0.26
PTCD1-204ENST00000430982 MYMKA6NI61 221 aa16.68■□□□□ 0.26
PTCD1-204ENST00000430982 H0YCG3 227 aa16.68■□□□□ 0.26
PTCD1-204ENST00000430982 K7ENM7 598 aa16.68■□□□□ 0.26
PTCD1-204ENST00000430982 ZC3H11AO75152 810 aaKnown RBP eCLIP16.68■□□□□ 0.26
PTCD1-204ENST00000430982 POMCP01189 267 aa16.68■□□□□ 0.26
PTCD1-204ENST00000430982 MAPTP10636 758 aaKnown RBP16.68■□□□□ 0.26
PTCD1-204ENST00000430982 MLH1P40692 756 aa16.68■□□□□ 0.26
PTCD1-204ENST00000430982 AFF1P51825 1210 aaKnown RBP16.68■□□□□ 0.26
PTCD1-204ENST00000430982 NUCB2P80303 420 aa16.68■□□□□ 0.26
PTCD1-204ENST00000430982 DCAF4L1Q3SXM0 396 aa16.68■□□□□ 0.26
PTCD1-204ENST00000430982 PDE12Q6L8Q7 609 aaKnown RBP16.68■□□□□ 0.26
PTCD1-204ENST00000430982 ANKRD54Q6NXT1 300 aa16.68■□□□□ 0.26
PTCD1-204ENST00000430982 KCNT2Q6UVM3 1135 aa16.68■□□□□ 0.26
PTCD1-204ENST00000430982 APBB1IPQ7Z5R6 666 aaPredicted RBP16.68■□□□□ 0.26
PTCD1-204ENST00000430982 UBALD2Q8IYN6 164 aa16.68■□□□□ 0.26
PTCD1-204ENST00000430982 TMEM161BQ8NDZ6 487 aa16.68■□□□□ 0.26
PTCD1-204ENST00000430982 LEO1Q8WVC0 666 aaPredicted RBP16.68■□□□□ 0.26
PTCD1-204ENST00000430982 DDX12PQ92771 950 aa16.68■□□□□ 0.26
PTCD1-204ENST00000430982 GAD1Q99259 594 aa16.68■□□□□ 0.26
PTCD1-204ENST00000430982 TARS2Q9BW92 718 aaKnown RBP16.68■□□□□ 0.26
PTCD1-204ENST00000430982 TNFSF13BQ9Y275 285 aa16.68■□□□□ 0.26
PTCD1-204ENST00000430982 GIT1Q9Y2X7 761 aa16.68■□□□□ 0.26
PTCD1-204ENST00000430982 WDR87Q6ZQQ6 2873 aa16.68■□□□□ 0.26
PTCD1-204ENST00000430982 TRAK2O60296 914 aa16.67■□□□□ 0.26
PTCD1-204ENST00000430982 FGF18O76093 207 aa16.67■□□□□ 0.26
PTCD1-204ENST00000430982 ZNF131P52739 623 aa16.67■□□□□ 0.26
PTCD1-204ENST00000430982 NCKAP1LP55160 1127 aa16.67■□□□□ 0.26
PTCD1-204ENST00000430982 BCAR1P56945 870 aa16.67■□□□□ 0.26
PTCD1-204ENST00000430982 ERVFC1P60507 584 aa16.67■□□□□ 0.26
PTCD1-204ENST00000430982 HAUS6Q7Z4H7 955 aa16.67■□□□□ 0.26
PTCD1-204ENST00000430982 FAM193BQ96PV7 902 aaPredicted RBP16.67■□□□□ 0.26
PTCD1-204ENST00000430982 ACO2Q99798 780 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms