RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 TADA2AO75478 443 aa16.45■□□□□ 0.22
MSH5-208ENST00000429846 CYP11B2P19099 503 aa16.45■□□□□ 0.22
MSH5-208ENST00000429846 TRAPPC10P48553 1259 aa16.45■□□□□ 0.22
MSH5-208ENST00000429846 PRPF4BQ13523 1007 aaKnown RBP16.45■□□□□ 0.22
MSH5-208ENST00000429846 PADI6Q6TGC4 694 aa16.45■□□□□ 0.22
MSH5-208ENST00000429846 DEPTORQ8TB45 409 aa16.45■□□□□ 0.22
MSH5-208ENST00000429846 RIN2Q8WYP3 895 aaPredicted RBP16.45■□□□□ 0.22
MSH5-208ENST00000429846 NXPE3Q969Y0 559 aa16.45■□□□□ 0.22
MSH5-208ENST00000429846 PDZD7Q9H5P4 517 aa16.45■□□□□ 0.22
MSH5-208ENST00000429846 FAM86C1Q9NVL1 165 aa16.45■□□□□ 0.22
MSH5-208ENST00000429846 KLK14Q9P0G3 267 aa16.45■□□□□ 0.22
MSH5-208ENST00000429846 A0A087WWV3 80 aa16.44■□□□□ 0.22
MSH5-208ENST00000429846 H0Y858 1186 aa16.44■□□□□ 0.22
MSH5-208ENST00000429846 ACKR2O00590 384 aa16.44■□□□□ 0.22
MSH5-208ENST00000429846 N4BP1O75113 896 aaKnown RBP16.44■□□□□ 0.22
MSH5-208ENST00000429846 RFPL2O75678 378 aa16.44■□□□□ 0.22
MSH5-208ENST00000429846 PRKCBP05771 671 aa16.44■□□□□ 0.22
MSH5-208ENST00000429846 THP07101 528 aa16.44■□□□□ 0.22
MSH5-208ENST00000429846 AOC1P19801 751 aa16.44■□□□□ 0.22
MSH5-208ENST00000429846 GBP2P32456 591 aaPredicted RBP16.44■□□□□ 0.22
MSH5-208ENST00000429846 GUCY1B3Q02153 619 aa16.44■□□□□ 0.22
MSH5-208ENST00000429846 ELAVL2Q12926 359 aaKnown RBP16.44■□□□□ 0.22
MSH5-208ENST00000429846 GNL2Q13823 731 aaKnown RBP16.44■□□□□ 0.22
MSH5-208ENST00000429846 TMEM132AQ24JP5 1023 aa16.44■□□□□ 0.22
MSH5-208ENST00000429846 TTC38Q5R3I4 469 aa16.44■□□□□ 0.22
MSH5-208ENST00000429846 CWF19L1Q69YN2 538 aaKnown RBP16.44■□□□□ 0.22
MSH5-208ENST00000429846 LILRA6Q6PI73 481 aa16.44■□□□□ 0.22
MSH5-208ENST00000429846 PALB2Q86YC2 1186 aa16.44■□□□□ 0.22
MSH5-208ENST00000429846 CCDC83Q8IWF9 413 aa16.44■□□□□ 0.22
MSH5-208ENST00000429846 FBXO18Q8NFZ0 1043 aa16.44■□□□□ 0.22
MSH5-208ENST00000429846 ZNF707Q96C28 371 aaPredicted RBP16.44■□□□□ 0.22
MSH5-208ENST00000429846 CCDC113Q9H0I3 377 aa16.44■□□□□ 0.22
MSH5-208ENST00000429846 NT5C3AQ9H0P0 336 aa16.44■□□□□ 0.22
MSH5-208ENST00000429846 PIDD1Q9HB75 910 aa16.44■□□□□ 0.22
MSH5-208ENST00000429846 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.44■□□□□ 0.22
MSH5-208ENST00000429846 FBXL21Q9UKT6 434 aa16.44■□□□□ 0.22
MSH5-208ENST00000429846 STK24Q9Y6E0 443 aa16.44■□□□□ 0.22
MSH5-208ENST00000429846 PTGESO14684 152 aa16.43■□□□□ 0.22
MSH5-208ENST00000429846 GFRA3O60609 400 aa16.43■□□□□ 0.22
MSH5-208ENST00000429846 RECQL4O94761 1208 aa16.43■□□□□ 0.22
MSH5-208ENST00000429846 RBM25P49756 843 aaKnown RBP16.43■□□□□ 0.22
MSH5-208ENST00000429846 FXR2P51116 673 aaKnown RBP eCLIP16.43■□□□□ 0.22
MSH5-208ENST00000429846 EFNA5P52803 228 aa16.43■□□□□ 0.22
MSH5-208ENST00000429846 ZNF174Q15697 407 aa16.43■□□□□ 0.22
MSH5-208ENST00000429846 DCAF4L1Q3SXM0 396 aa16.43■□□□□ 0.22
MSH5-208ENST00000429846 PDXDC1Q6P996 788 aa16.43■□□□□ 0.22
MSH5-208ENST00000429846 APBB1IPQ7Z5R6 666 aaPredicted RBP16.43■□□□□ 0.22
MSH5-208ENST00000429846 NOSTRINQ8IVI9 506 aa16.43■□□□□ 0.22
MSH5-208ENST00000429846 FLCNQ8NFG4 579 aa16.43■□□□□ 0.22
MSH5-208ENST00000429846 PIK3R5Q8WYR1 880 aa16.43■□□□□ 0.22
MSH5-208ENST00000429846 BSNDQ8WZ55 320 aa16.43■□□□□ 0.22
MSH5-208ENST00000429846 KIFAP3Q92845 792 aa16.43■□□□□ 0.22
MSH5-208ENST00000429846 B3GALT6Q96L58 329 aa16.43■□□□□ 0.22
MSH5-208ENST00000429846 IFT74Q96LB3 600 aa16.43■□□□□ 0.22
MSH5-208ENST00000429846 ZSCAN31Q96LW9 406 aaPredicted RBP16.43■□□□□ 0.22
MSH5-208ENST00000429846 RTP3Q9BQQ7 232 aa16.43■□□□□ 0.22
MSH5-208ENST00000429846 TTPALQ9BTX7 342 aa16.43■□□□□ 0.22
MSH5-208ENST00000429846 PRKD2Q9BZL6 878 aa16.43■□□□□ 0.22
MSH5-208ENST00000429846 WNT16Q9UBV4 365 aa16.43■□□□□ 0.22
MSH5-208ENST00000429846 NOL7Q9UMY1 257 aaKnown RBP16.43■□□□□ 0.22
MSH5-208ENST00000429846 VWA8A3KMH1 1905 aa16.43■□□□□ 0.22
MSH5-208ENST00000429846 CASTOR2A6NHX0 329 aa16.42■□□□□ 0.22
MSH5-208ENST00000429846 ZMYND10O75800 440 aa16.42■□□□□ 0.22
MSH5-208ENST00000429846 KIF4AO95239 1232 aa16.42■□□□□ 0.22
MSH5-208ENST00000429846 NBL1P41271 181 aa16.42■□□□□ 0.22
MSH5-208ENST00000429846 RTP2Q5QGT7 225 aa16.42■□□□□ 0.22
MSH5-208ENST00000429846 GLYCTKQ8IVS8 523 aa16.42■□□□□ 0.22
MSH5-208ENST00000429846 RAB34Q9BZG1 259 aa16.42■□□□□ 0.22
MSH5-208ENST00000429846 SH2B1Q9NRF2 756 aaPredicted RBP16.42■□□□□ 0.22
MSH5-208ENST00000429846 SNTG2Q9NY99 539 aa16.42■□□□□ 0.22
MSH5-208ENST00000429846 FBXW11Q9UKB1 542 aa16.42■□□□□ 0.22
MSH5-208ENST00000429846 ZFP37Q9Y6Q3 630 aaPredicted RBP16.42■□□□□ 0.22
MSH5-208ENST00000429846 TTLL13PA6NNM8 815 aa16.41■□□□□ 0.22
MSH5-208ENST00000429846 TMEM189-UBE2V1I3L0A0 370 aa16.41■□□□□ 0.22
MSH5-208ENST00000429846 HNRNPA1P09651 372 aaKnown RBP eCLIP16.41■□□□□ 0.22
MSH5-208ENST00000429846 SPATA31D3P0C874 917 aa16.41■□□□□ 0.22
MSH5-208ENST00000429846 SRFP11831 508 aa16.41■□□□□ 0.22
MSH5-208ENST00000429846 RPL17P18621 184 aaKnown RBP16.41■□□□□ 0.22
MSH5-208ENST00000429846 HOXA9P31269 272 aa16.41■□□□□ 0.22
MSH5-208ENST00000429846 CCT6AP40227 531 aaKnown RBP16.41■□□□□ 0.22
MSH5-208ENST00000429846 NAB2Q15742 525 aa16.41■□□□□ 0.22
MSH5-208ENST00000429846 PSMD5Q16401 504 aa16.41■□□□□ 0.22
MSH5-208ENST00000429846 LIN9Q5TKA1 542 aa16.41■□□□□ 0.22
MSH5-208ENST00000429846 FAM171A1Q5VUB5 890 aa16.41■□□□□ 0.22
MSH5-208ENST00000429846 SPATA31D4Q6ZUB0 917 aa16.41■□□□□ 0.22
MSH5-208ENST00000429846 SIX5Q8N196 739 aa16.41■□□□□ 0.22
MSH5-208ENST00000429846 FAM184AQ8NB25 1140 aa16.41■□□□□ 0.22
MSH5-208ENST00000429846 RABGGTAQ92696 567 aa16.41■□□□□ 0.22
MSH5-208ENST00000429846 MYADMQ96S97 322 aa16.41■□□□□ 0.22
MSH5-208ENST00000429846 PAAF1Q9BRP4 392 aa16.41■□□□□ 0.22
MSH5-208ENST00000429846 BHMT2Q9H2M3 363 aa16.41■□□□□ 0.22
MSH5-208ENST00000429846 LRWD1Q9UFC0 647 aa16.41■□□□□ 0.22
MSH5-208ENST00000429846 PHLPP2Q6ZVD8 1323 aa16.41■□□□□ 0.22
MSH5-208ENST00000429846 TRIP11Q15643 1979 aa16.4■□□□□ 0.22
MSH5-208ENST00000429846 LAMP2P13473 410 aa16.4■□□□□ 0.22
MSH5-208ENST00000429846 NPR3P17342 541 aa16.4■□□□□ 0.22
MSH5-208ENST00000429846 PDIA5Q14554 519 aa16.4■□□□□ 0.22
MSH5-208ENST00000429846 ATF7IP2Q5U623 682 aa16.4■□□□□ 0.22
MSH5-208ENST00000429846 PRSS55Q6UWB4 352 aaPredicted RBP16.4■□□□□ 0.22
MSH5-208ENST00000429846 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms