RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 ZMYM2Q9UBW7 1377 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 ZNF536O15090 1300 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 ARHGEF35A5YM69 484 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 DDTLA6NHG4 134 aaPredicted RBP9.37□□□□□ -0.91
GABPB1-205ENST00000429662 GOLGA8CPA6NN73 597 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 RSPH10B2B2RC85 870 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 E7EVH7 732 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 H0YHG0 523 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 EML1O00423 815 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 DAPK3O43293 454 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 TRAPPC3O43617 180 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 BUB1BO60566 1050 aaPredicted RBP9.37□□□□□ -0.91
GABPB1-205ENST00000429662 EXOC3O60645 756 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 FGGP02679 453 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 RSPH10BP0C881 870 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 GZMAP12544 262 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 LIG3P49916 1009 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 GPC5P78333 572 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 DR1Q01658 176 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 GUCY1A3Q02108 690 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 CYP4A11Q02928 519 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 ENPEPQ07075 957 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 DHX9Q08211 1270 aaKnown RBP9.37□□□□□ -0.91
GABPB1-205ENST00000429662 IFFO1Q0D2I5 559 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 BFSP1Q12934 665 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 SLMAPQ14BN4 828 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 UAP1Q16222 522 aaPredicted RBP9.37□□□□□ -0.91
GABPB1-205ENST00000429662 LRIT3Q3SXY7 679 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 USH1GQ495M9 461 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 CEP55Q53EZ4 464 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 ODR4Q5SWX8 454 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 DUPD1Q68J44 220 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 CCDC121Q6ZUS5 278 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 CCDC50Q8IVM0 306 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 ZFPM1Q8IX07 1006 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 SYCP3Q8IZU3 236 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 PRPF38AQ8NAV1 312 aaKnown RBP9.37□□□□□ -0.91
GABPB1-205ENST00000429662 PGM2Q96G03 612 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 FAM81BQ96LP2 452 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 ACCSQ96QU6 501 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 TMEM109Q9BVC6 243 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 STRA6Q9BX79 667 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 TXLNGYQ9BZA5 131 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 WNT8AQ9H1J5 351 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 ST6GALNAC4Q9H4F1 302 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 LARSQ9P2J5 1176 aaKnown RBP9.37□□□□□ -0.91
GABPB1-205ENST00000429662 AMACRQ9UHK6 382 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 SLC12A6Q9UHW9 1150 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 DBR1Q9UK59 544 aaKnown RBP9.37□□□□□ -0.91
GABPB1-205ENST00000429662 MTUS1Q9ULD2 1270 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 SAMM50Q9Y512 469 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 PCDHGA10Q9Y5H3 936 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 MYH10P35580 1976 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 NCOR1O75376 2440 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 ADGRA2Q96PE1 1338 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 MYH4Q9Y623 1939 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 MYO1FO00160 1098 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 OPLAHO14841 1288 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 TTI1O43156 1089 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 PHF2O75151 1096 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 RTN2O75298 545 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 GJB1P08034 283 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 NMT1P30419 496 aaKnown RBP9.36□□□□□ -0.91
GABPB1-205ENST00000429662 GTF2A1P52655 376 aaPredicted RBP9.36□□□□□ -0.91
GABPB1-205ENST00000429662 RBM5P52756 815 aaKnown RBP eCLIP9.36□□□□□ -0.91
GABPB1-205ENST00000429662 LACTBP83111 547 aaPredicted RBP9.36□□□□□ -0.91
GABPB1-205ENST00000429662 ACTN3Q08043 901 aaPredicted RBP9.36□□□□□ -0.91
GABPB1-205ENST00000429662 ADCY2Q08462 1091 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 TCP10Q12799 353 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 CTTNQ14247 550 aaKnown RBP9.36□□□□□ -0.91
GABPB1-205ENST00000429662 KRT71Q3SY84 523 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 KIAA1755Q5JYT7 1200 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 C6orf118Q5T5N4 469 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 SEL1L2Q5TEA6 688 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 TTC19Q6DKK2 380 aaPredicted RBP9.36□□□□□ -0.91
GABPB1-205ENST00000429662 C6orf89Q6UWU4 347 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 SH3BP5LQ7L8J4 393 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 RPAINQ86UA6 219 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 GLYCTKQ8IVS8 523 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 MAIP1Q8WWC4 291 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 TLCD1Q96CP7 247 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 CYFIP2Q96F07 1278 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 CABS1Q96KC9 395 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 FIZ1Q96SL8 496 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 P2RX7Q99572 595 aaKnown RBP9.36□□□□□ -0.91
GABPB1-205ENST00000429662 TACO1Q9BSH4 297 aaKnown RBP9.36□□□□□ -0.91
GABPB1-205ENST00000429662 ZNF577Q9BSK1 485 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 PLVAPQ9BX97 442 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 RANBP17Q9H2T7 1088 aaKnown RBP9.36□□□□□ -0.91
GABPB1-205ENST00000429662 PABPC3Q9H361 631 aaKnown RBP9.36□□□□□ -0.91
GABPB1-205ENST00000429662 CENPHQ9H3R5 247 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 YY1AP1Q9H869 796 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 A1CFQ9NQ94 594 aaKnown RBP9.36□□□□□ -0.91
GABPB1-205ENST00000429662 MAP3K20Q9NYL2 800 aaKnown RBP9.36□□□□□ -0.91
GABPB1-205ENST00000429662 RGL1Q9NZL6 768 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 TMOD2Q9NZR1 351 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 PCYOX1Q9UHG3 505 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 PNMA2Q9UL42 364 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 TMX2Q9Y320 296 aa9.36□□□□□ -0.91
GABPB1-205ENST00000429662 CAPN7Q9Y6W3 813 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms