RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 ERI1Q8IV48 349 aaKnown RBP9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 MYO1HQ8N1T3 1032 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 SPATA5Q8NB90 893 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 CCDC110Q8TBZ0 833 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 EME1Q96AY2 570 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 CCDC127Q96BQ5 260 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 CEP295NLQ96MC4 621 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 PITPNM3Q9BZ71 974 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 KLHL4Q9C0H6 718 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 TMEM60Q9H2L4 133 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 MAGEC2Q9UBF1 373 aaPredicted RBP9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 ASAP1Q9ULH1 1129 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 WDR19Q8NEZ3 1342 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 PITPNM2Q9BZ72 1349 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 STK36Q9NRP7 1315 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 NPHP3-ACAD11A0A0J9YXS1 232 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 PGRMC1O00264 195 aaKnown RBP9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 RASGRF2O14827 1237 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 MAGEB2O15479 319 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 GSC2O15499 205 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 PLEKP08567 350 aaPredicted RBP9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 CCDC159P0C7I6 412 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 SCG2P13521 617 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 TOB1P50616 345 aaPredicted RBP9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 CHN2P52757 468 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 CCDC14Q49A88 953 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 SLC45A4Q5BKX6 768 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 ARHGAP27Q6ZUM4 889 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 NEK10Q6ZWH5 1172 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 UBE2Q1Q7Z7E8 422 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 MCF2L2Q86YR7 1114 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 ZFP28Q8NHY6 868 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 DTX3LQ8TDB6 740 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 MAELQ96JY0 434 aaKnown RBP9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 NEUROD6Q96NK8 337 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 MIPEPQ99797 713 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 CTRCQ99895 268 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 CEP44Q9C0F1 390 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 RPAP3Q9H6T3 665 aaPredicted RBP9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 GID8Q9NWU2 228 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 GIN1Q9NXP7 522 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 VPS54Q9P1Q0 977 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 PCDH11YQ9BZA8 1340 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 WNK3Q9BYP7 1800 aa9.43□□□□□ -0.9
CDC42BPA-206ENST00000429440 C4AP0C0L4 1744 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 C4BP0C0L5 1744 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 BUB1O43683 1085 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 DKC1O60832 514 aaKnown RBP eCLIP9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 GAS8O95995 478 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 CLPTM1O96005 669 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 UQCRBP14927 111 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 ANPEPP15144 967 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 DRG2P55039 364 aaKnown RBP9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 SLC29A2Q14542 456 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 LRRC14Q15048 493 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 RPS6KA1Q15418 735 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 PPP2R5EQ16537 467 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 SHROOM1Q2M3G4 852 aaPredicted RBP9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 PCNX4Q63HM2 1172 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 NIPAL1Q6NVV3 410 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 ATG9AQ7Z3C6 839 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 C2CD5Q86YS7 1000 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 RHOT2Q8IXI1 618 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 GOLM1Q8NBJ4 401 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 APPBP2Q92624 585 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 ESR2Q92731 530 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 HPS3Q969F9 1004 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 SGF29Q96ES7 293 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 DBNDD2Q9BQY9 259 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 CSRNP2Q9H175 543 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 PRDM11Q9NQV5 511 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 GINM1Q9NU53 330 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 ZDHHC18Q9NUE0 388 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 AK5Q9Y6K8 562 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 LOC105371267A0A1B0GV96 52 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 ANKRD34BA5PLL1 514 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 FAM196BA6NMK8 535 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 NOTOA8MTQ0 251 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 ERVV-2B6SEH9 535 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 SMIM18P0DKX4 95 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 TAC1P20366 129 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 ENPP1P22413 925 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 SLC5A2P31639 672 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 S100A5P33763 92 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 PRCPP42785 496 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 EIF2B2P49770 351 aaKnown RBP9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 RPS3AP61247 264 aaKnown RBP9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 EHHADHQ08426 723 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 MOGSQ13724 837 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 TBC1D10BQ4KMP7 808 aaPredicted RBP9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 SIGIRRQ6IA17 410 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 SPOPLQ6IQ16 392 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 ZNF449Q6P9G9 518 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 TTC23LQ6PF05 361 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 LMBR1LQ6UX01 489 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 VSTM1Q6UX27 236 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 DTHD1Q6ZMT9 781 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 ARHGEF18Q6ZSZ5 1173 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 USP49Q70CQ1 688 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 VASH1Q7L8A9 365 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms