RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 ZBBXA8MT70 800 aa13.52□□□□□ -0.25
LDB3-205ENST00000429277 PRKCBP05771 671 aa13.52□□□□□ -0.25
LDB3-205ENST00000429277 SERPINB9P50453 376 aa13.52□□□□□ -0.25
LDB3-205ENST00000429277 C12orf60Q5U649 245 aa13.52□□□□□ -0.25
LDB3-205ENST00000429277 C4orf22Q6V702 233 aa13.52□□□□□ -0.25
LDB3-205ENST00000429277 SZRD1Q7Z422 152 aa13.52□□□□□ -0.25
LDB3-205ENST00000429277 OR6P1Q8NGX9 317 aa13.52□□□□□ -0.25
LDB3-205ENST00000429277 TEKT4Q8WW24 435 aa13.52□□□□□ -0.25
LDB3-205ENST00000429277 RAPGEF5Q92565 580 aa13.52□□□□□ -0.25
LDB3-205ENST00000429277 LSM7Q9UK45 103 aaKnown RBP13.52□□□□□ -0.25
LDB3-205ENST00000429277 ENTPD3O75355 529 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 KRT4P19013 534 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 FAM47EQ6ZV65 393 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 PLEKHA5Q9HAU0 1116 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 TMEM260Q9NX78 707 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 WARS2Q9UGM6 360 aaKnown RBP13.51□□□□□ -0.25
LDB3-205ENST00000429277 LIMA1Q9UHB6 759 aaKnown RBP13.51□□□□□ -0.25
LDB3-205ENST00000429277 ADAM21Q9UKJ8 722 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 LAMC1P11047 1609 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 PDS5AQ29RF7 1337 aaKnown RBP13.51□□□□□ -0.25
LDB3-205ENST00000429277 SPAG6O75602 509 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 YWHABP31946 246 aaKnown RBP13.51□□□□□ -0.25
LDB3-205ENST00000429277 RFC5P40937 340 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 KCNQ4P56696 695 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 HIF1AQ16665 826 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 XRRA1Q6P2D8 792 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 TEX2Q8IWB9 1127 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 STX19Q8N4C7 294 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 C18orf8Q96DM3 657 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 OLFM3Q96PB7 478 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 INTUQ9ULD6 942 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 MAGI3Q5TCQ9 1506 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 DIAPH2O60879 1101 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 IL10P22301 178 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 ADORA2BP29275 332 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 POLE2P56282 527 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 WASHC5Q12768 1159 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 COG2Q14746 738 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 MMS22LQ6ZRQ5 1243 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 RRM2BQ7LG56 351 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 DCUN1D1Q96GG9 259 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 TEX13BQ9BXU2 312 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 STK33Q9BYT3 514 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 SMARCAD1Q9H4L7 1026 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 COG4Q9H9E3 785 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 NYAP2Q9P242 653 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 ZFATQ9P243 1243 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 MAFGO15525 162 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 PID1Q7Z2X4 250 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 ZC3H18Q86VM9 953 aaKnown RBP13.51□□□□□ -0.25
LDB3-205ENST00000429277 SPON2Q9BUD6 331 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 GOLPH3LQ9H4A5 285 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 TTC7AQ9ULT0 858 aaPredicted RBP13.51□□□□□ -0.25
LDB3-205ENST00000429277 PREX2Q70Z35 1606 aa13.51□□□□□ -0.25
LDB3-205ENST00000429277 C3orf70A6NLC5 250 aaPredicted RBP13.5□□□□□ -0.25
LDB3-205ENST00000429277 TPI1P60174 286 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 HDLBPQ00341 1268 aaKnown RBP13.5□□□□□ -0.25
LDB3-205ENST00000429277 HABP4Q5JVS0 413 aaKnown RBP13.5□□□□□ -0.25
LDB3-205ENST00000429277 RARS2Q5T160 578 aaKnown RBP13.5□□□□□ -0.25
LDB3-205ENST00000429277 TMCO5AQ8N6Q1 288 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 ARHGEF1Q92888 912 aaKnown RBP13.5□□□□□ -0.25
LDB3-205ENST00000429277 RPAP3Q9H6T3 665 aaPredicted RBP13.5□□□□□ -0.25
LDB3-205ENST00000429277 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.5□□□□□ -0.25
LDB3-205ENST00000429277 ITIH6Q6UXX5 1313 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 CD4P01730 458 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 GGCXP38435 758 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 BEND6Q5SZJ8 279 aaPredicted RBP13.5□□□□□ -0.25
LDB3-205ENST00000429277 STRIP1Q5VSL9 837 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 HOMEZQ8IX15 550 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 ZNF512BQ96KM6 892 aaPredicted RBP13.5□□□□□ -0.25
LDB3-205ENST00000429277 NDFIP2Q9NV92 336 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 SLC38A7Q9NVC3 462 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 ITM2BQ9Y287 266 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 IL18RAPO95256 599 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 ALDH1A1P00352 501 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 AGTP01019 485 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 NME3Q13232 169 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 FASTKD1Q53R41 847 aaKnown RBP13.5□□□□□ -0.25
LDB3-205ENST00000429277 ZC3H12BQ5HYM0 836 aaKnown RBP13.5□□□□□ -0.25
LDB3-205ENST00000429277 TAS2R42Q7RTR8 314 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 SPATA2LQ8IUW3 424 aaPredicted RBP13.5□□□□□ -0.25
LDB3-205ENST00000429277 PBXIP1Q96AQ6 731 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 SAAL1Q96ER3 474 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 FAM84BQ96KN1 310 aaPredicted RBP13.5□□□□□ -0.25
LDB3-205ENST00000429277 DDX47Q9H0S4 455 aaKnown RBP13.5□□□□□ -0.25
LDB3-205ENST00000429277 CDV3Q9UKY7 258 aaKnown RBP13.5□□□□□ -0.25
LDB3-205ENST00000429277 TDP2O95551 362 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 HSPA9P38646 679 aaKnown RBP13.5□□□□□ -0.25
LDB3-205ENST00000429277 FLOT2Q14254 428 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 PIGHQ14442 188 aaPredicted RBP13.5□□□□□ -0.25
LDB3-205ENST00000429277 EDRF1Q3B7T1 1238 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 LRRC23Q53EV4 343 aaPredicted RBP13.5□□□□□ -0.25
LDB3-205ENST00000429277 FAM182BQ5T319 152 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 PRUNE1Q86TP1 453 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 GLYCTKQ8IVS8 523 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 ELOA2Q8IYF1 753 aaPredicted RBP13.5□□□□□ -0.25
LDB3-205ENST00000429277 SLC44A5Q8NCS7 719 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 SARS2Q9NP81 518 aaKnown RBP13.5□□□□□ -0.25
LDB3-205ENST00000429277 ABCC3O15438 1527 aa13.5□□□□□ -0.25
LDB3-205ENST00000429277 HNRNPRO43390 633 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms