RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 REXO1Q8N1G1 1221 aaKnown RBP12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 HASPINQ8TF76 798 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 MAP4K1Q92918 833 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 MCRS1Q96EZ8 462 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 TEKT3Q9BXF9 490 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 NIFKQ9BYG3 293 aaKnown RBP12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 BMP2KQ9NSY1 1161 aaPredicted RBP12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 RBM28Q9NW13 759 aaKnown RBP12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 ADAM28Q9UKQ2 775 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 ZMIZ1Q9ULJ6 1067 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 SGSM2O43147 1006 aa12.98□□□□□ -0.33
ALMS1P1-201ENST00000428767 STBD1O95210 358 aa12.98□□□□□ -0.33
ALMS1P1-201ENST00000428767 SFNP31947 248 aa12.98□□□□□ -0.33
ALMS1P1-201ENST00000428767 CCR3P51677 355 aa12.98□□□□□ -0.33
ALMS1P1-201ENST00000428767 SF3A2Q15428 464 aaKnown RBP12.98□□□□□ -0.33
ALMS1P1-201ENST00000428767 PABPC1LQ4VXU2 614 aaKnown RBP12.98□□□□□ -0.33
ALMS1P1-201ENST00000428767 TTC22Q5TAA0 569 aa12.98□□□□□ -0.33
ALMS1P1-201ENST00000428767 HEATR6Q6AI08 1181 aaKnown RBP12.98□□□□□ -0.33
ALMS1P1-201ENST00000428767 SLC7A14Q8TBB6 771 aa12.98□□□□□ -0.33
ALMS1P1-201ENST00000428767 CPB2Q96IY4 423 aa12.98□□□□□ -0.33
ALMS1P1-201ENST00000428767 LMAN1LQ9HAT1 526 aa12.98□□□□□ -0.33
ALMS1P1-201ENST00000428767 UBN1Q9NPG3 1134 aa12.98□□□□□ -0.33
ALMS1P1-201ENST00000428767 AKAP13Q12802 2813 aa12.98□□□□□ -0.33
ALMS1P1-201ENST00000428767 DSPP15924 2871 aaKnown RBP12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 GOLGA8AA7E2F4 631 aa12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 GOLGA8BA8MQT2 603 aa12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 ADAM12O43184 909 aa12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 HRO43593 1189 aa12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 ECI2O75521 394 aa12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 PSMD5Q16401 504 aa12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 TANGO2Q6ICL3 276 aa12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 UNQ6494/PRO21346Q6UXR6 183 aa12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 SRGAP1Q7Z6B7 1085 aa12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 SGMS1Q86VZ5 419 aa12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 CEP57Q86XR8 500 aa12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 ZNF687Q8N1G0 1237 aa12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 FAM160A2Q8N612 972 aaPredicted RBP12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 SLC5A5Q92911 643 aa12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 TMEM143Q96AN5 459 aa12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 CLSTN3Q9BQT9 956 aa12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 PAAF1Q9BRP4 392 aa12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 BRD9Q9H8M2 597 aa12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 RXFP3Q9NSD7 469 aa12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 DNMT3BQ9UBC3 853 aaKnown RBP12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 MRPS23Q9Y3D9 190 aaKnown RBP12.97□□□□□ -0.33
ALMS1P1-201ENST00000428767 KIF26AQ9ULI4 1882 aaPredicted RBP12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 ZBTB43O43298 467 aa12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 TADA2AO75478 443 aa12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 ERLIN2O94905 339 aa12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 CEBPBP17676 345 aa12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 AKAP5P24588 427 aa12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 CIITAP33076 1130 aa12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 NPEPPSP55786 919 aa12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 SLC5A9Q2M3M2 681 aa12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 AXDND1Q5T1B0 1012 aaPredicted RBP12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 POTEHQ6S545 545 aa12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 ANO5Q75V66 913 aa12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 CEP68Q76N32 757 aa12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 C12orf50Q8NA57 414 aaPredicted RBP12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 CNNM3Q8NE01 707 aa12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 PRPF31Q8WWY3 499 aaKnown RBP12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 TCEANC2Q96MN5 208 aa12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 RIT2Q99578 217 aa12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 NXF3Q9H4D5 531 aaKnown RBP12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 C6orf50Q9HD87 102 aa12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 KLK14Q9P0G3 267 aa12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 BRPF3Q9ULD4 1205 aa12.96□□□□□ -0.33
ALMS1P1-201ENST00000428767 DMXL2Q8TDJ6 3036 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 SF3B1O75533 1304 aaKnown RBP eCLIP12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 EML5Q05BV3 1969 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 TRIP11Q15643 1979 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 MAN2B1O00754 1011 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 SLC27A2O14975 620 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 TSPAN1O60635 241 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 CDC27P30260 824 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 HOXA9P31269 272 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 CXCL12P48061 93 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 LAMTOR4Q0VGL1 99 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 GAS6Q14393 721 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 HSP90AA2PQ14568 343 aaPredicted RBP12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 PFKFB3Q16875 520 aaPredicted RBP12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 FAM171A1Q5VUB5 890 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 GPR65Q8IYL9 337 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 ZNF579Q8NAF0 562 aaKnown RBP12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 RNF149Q8NC42 400 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 FAM3CQ92520 227 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 DNASE1L2Q92874 299 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 JPH2Q9BR39 696 aaPredicted RBP12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 TTPALQ9BTX7 342 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 ZMYND12Q9H0C1 365 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 ARRDC1-AS1Q9H2J1 176 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 KCNH3Q9ULD8 1083 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 NAP1L2Q9ULW6 460 aaPredicted RBP12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 ATG2BQ96BY7 2078 aa12.95□□□□□ -0.34
ALMS1P1-201ENST00000428767 SETXQ7Z333 2677 aaKnown RBP12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 ESYT2A0FGR8 921 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 CASTOR2A6NHX0 329 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 TM4SF5O14894 197 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 AXIN1O15169 862 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 EDIL3O43854 480 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms