RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 HYAL1Q12794 435 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 STRN3Q13033 797 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 TUSC3Q13454 348 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 CAMK2BQ13554 666 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 HSP90AA2PQ14568 343 aaPredicted RBP10.03□□□□□ -0.8
SMC1A-203ENST00000428014 PAN2Q504Q3 1202 aaKnown RBP10.03□□□□□ -0.8
SMC1A-203ENST00000428014 SPOUT1Q5T280 376 aaKnown RBP10.03□□□□□ -0.8
SMC1A-203ENST00000428014 MPZL3Q6UWV2 235 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 SV2BQ7L1I2 683 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 CD302Q8IX05 232 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 FAM193BQ96PV7 902 aaPredicted RBP10.03□□□□□ -0.8
SMC1A-203ENST00000428014 FIZ1Q96SL8 496 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 COLEC11Q9BWP8 271 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 STRA6Q9BX79 667 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 EIF2AQ9BY44 585 aaKnown RBP10.03□□□□□ -0.8
SMC1A-203ENST00000428014 ZBP1Q9H171 429 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 ALG13Q9NP73 1137 aaKnown RBP10.03□□□□□ -0.8
SMC1A-203ENST00000428014 CHST7Q9NS84 486 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 KBTBD4Q9NVX7 518 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 USP25Q9UHP3 1055 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 FAN1Q9Y2M0 1017 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 STYXL1Q9Y6J8 313 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 ATG2AQ2TAZ0 1938 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 PLXNA4Q9HCM2 1894 aa10.02□□□□□ -0.8
SMC1A-203ENST00000428014 GRXCR2A6NFK2 248 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 B4GALT5O43286 388 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 TRAK2O60296 914 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 LILRB3O75022 631 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 TBCAO75347 108 aaKnown RBP10.02□□□□□ -0.81
SMC1A-203ENST00000428014 THP07101 528 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 DNAJB1P25685 340 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 GATMP50440 423 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 SNRPFP62306 86 aaKnown RBP10.02□□□□□ -0.81
SMC1A-203ENST00000428014 SMAD4Q13485 552 aaKnown RBP10.02□□□□□ -0.81
SMC1A-203ENST00000428014 KARSQ15046 597 aaKnown RBP10.02□□□□□ -0.81
SMC1A-203ENST00000428014 POSTNQ15063 836 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 STK38Q15208 465 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 SMAD2Q15796 467 aaKnown RBP10.02□□□□□ -0.81
SMC1A-203ENST00000428014 AXDND1Q5T1B0 1012 aaPredicted RBP10.02□□□□□ -0.81
SMC1A-203ENST00000428014 NT5DC1Q5TFE4 455 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 RRAGBQ5VZM2 374 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 SLFN12LQ6IEE8 588 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 ELMSAN1Q6PJG2 1045 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 TAS1R3Q7RTX0 852 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 HAUS6Q7Z4H7 955 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 GPBP1Q86WP2 473 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 NT5DC4Q86YG4 428 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 MAP4K3Q8IVH8 894 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 IQUBQ8NA54 791 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 SMRP1Q8NCR6 262 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 TMEM174Q8WUU8 243 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 MSLNLQ96KJ4 702 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 RPS6KC1Q96S38 1066 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 POP1Q99575 1024 aaKnown RBP10.02□□□□□ -0.81
SMC1A-203ENST00000428014 REEP2Q9BRK0 252 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 CCDC94Q9BW85 323 aaPredicted RBP10.02□□□□□ -0.81
SMC1A-203ENST00000428014 OXCT2Q9BYC2 517 aaPredicted RBP10.02□□□□□ -0.81
SMC1A-203ENST00000428014 SCAND2PQ9GZW5 306 aaPredicted RBP10.02□□□□□ -0.81
SMC1A-203ENST00000428014 NXF3Q9H4D5 531 aaKnown RBP10.02□□□□□ -0.81
SMC1A-203ENST00000428014 RXFP1Q9HBX9 757 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 DZANK1Q9NVP4 752 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 CNTN3Q9P232 1028 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 FNIP2Q9P278 1114 aa10.02□□□□□ -0.81
SMC1A-203ENST00000428014 TDRD15B5MCY1 1934 aaKnown RBP10.01□□□□□ -0.81
SMC1A-203ENST00000428014 FAM237AA0A1B0GTK4 181 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 C2orf71A6NGG8 1288 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 CCDC169A6NNP5 214 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 MEIS3P2A8K0S8 358 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 NRP1O14786 923 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 CLDN3O15551 220 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 ZC3H11AO75152 810 aaKnown RBP eCLIP10.01□□□□□ -0.81
SMC1A-203ENST00000428014 DDHD2O94830 711 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 FAM13AO94988 1023 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 NPTXRO95502 500 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 POU2F2P09086 479 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 CLTAP09496 248 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 CYP3A5P20815 502 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 RPL9P32969 192 aaKnown RBP10.01□□□□□ -0.81
SMC1A-203ENST00000428014 LTBRP36941 435 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 MLH1P40692 756 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 SLC11A1P49279 550 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 YARSP54577 528 aaKnown RBP10.01□□□□□ -0.81
SMC1A-203ENST00000428014 GRIN1Q05586 938 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 ITIH3Q06033 890 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 NOLC1Q14978 699 aaKnown RBP eCLIP10.01□□□□□ -0.81
SMC1A-203ENST00000428014 NAB2Q15742 525 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 STXBP4Q6ZWJ1 553 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 ZNF720Q7Z2F6 126 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 TMC7Q7Z402 723 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 FAM178BQ8IXR5 827 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 RNF169Q8NCN4 708 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 RASSF8Q8NHQ8 419 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 CASP10Q92851 521 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 LPPQ93052 612 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 DNAJC19Q96DA6 116 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 CPB2Q96IY4 423 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 EPSTI1Q96J88 318 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 NECTIN4Q96NY8 510 aa10.01□□□□□ -0.81
SMC1A-203ENST00000428014 PPP1R10Q96QC0 940 aaKnown RBP10.01□□□□□ -0.81
SMC1A-203ENST00000428014 GAD1Q99259 594 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms