RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 A0A0A6YYK5 440 aaPredicted RBP23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 STRNO43815 780 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 SGPL1O95470 568 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 LDHAP00338 332 aaKnown RBP23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 EFNA5P52803 228 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 CLDN10P78369 228 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 PRPF4BQ13523 1007 aaKnown RBP23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 SEZ6Q53EL9 994 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 CDCA2Q69YH5 1023 aaPredicted RBP23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 RHPN2Q8IUC4 686 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 EXOC8Q8IYI6 725 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 RPUSD2Q8IZ73 545 aaKnown RBP23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 TPCN2Q8NHX9 752 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 TATDN2Q93075 761 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 PARK7Q99497 189 aaKnown RBP23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 CCDC113Q9H0I3 377 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 EVPLQ92817 2033 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 CYP26A1O43174 497 aa23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 HBP1O60381 514 aa23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 MSCO60682 206 aa23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 TMEM253P0C7T8 217 aa23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 ZBTB48P10074 688 aaPredicted RBP23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 LAMC2Q13753 1193 aa23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 ZBTB8OSQ8IWT0 167 aa23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 RNPEPQ9H4A4 650 aa23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 ERAP1Q9NZ08 941 aa23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 SUCLA2Q9P2R7 463 aaPredicted RBP23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 RAB21Q9UL25 225 aa23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 ZRANB2O95218 330 aaKnown RBP eCLIP23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 GH1P01241 217 aa23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 GJB1P08034 283 aa23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 ADCYAP1R1P41586 468 aa23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 BRD3Q15059 726 aa23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 MAMDC4Q6UXC1 1216 aa23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 ZPBP2Q6X784 338 aa23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 DPP9Q86TI2 863 aa23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 NOP9Q86U38 636 aaKnown RBP23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 LRRC57Q8N9N7 239 aa23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 EPS8L1Q8TE68 723 aa23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 CTNNBL1Q8WYA6 563 aaPredicted RBP23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 ZNF668Q96K58 619 aaPredicted RBP23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 MRPL4Q9BYD3 311 aaKnown RBP23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 ACP6Q9NPH0 428 aa23.47■■□□□ 1.35
CNEP1R1-202ENST00000427478 NCANO14594 1321 aa23.46■■□□□ 1.35
CNEP1R1-202ENST00000427478 CCDC151A5D8V7 595 aa23.46■■□□□ 1.35
CNEP1R1-202ENST00000427478 PTPROQ16827 1216 aa23.46■■□□□ 1.35
CNEP1R1-202ENST00000427478 TAF3Q5VWG9 929 aa23.46■■□□□ 1.35
CNEP1R1-202ENST00000427478 TDRD10Q5VZ19 366 aaKnown RBP23.46■■□□□ 1.35
CNEP1R1-202ENST00000427478 SLC47A2Q86VL8 602 aa23.46■■□□□ 1.35
CNEP1R1-202ENST00000427478 DHX38Q92620 1227 aaKnown RBP23.46■■□□□ 1.35
CNEP1R1-202ENST00000427478 NLRP4Q96MN2 994 aa23.46■■□□□ 1.35
CNEP1R1-202ENST00000427478 JPH2Q9BR39 696 aaPredicted RBP23.46■■□□□ 1.35
CNEP1R1-202ENST00000427478 NOCTQ9UK39 431 aaKnown RBP23.46■■□□□ 1.35
CNEP1R1-202ENST00000427478 CLDN3O15551 220 aa23.45■■□□□ 1.35
CNEP1R1-202ENST00000427478 LGALS2P05162 132 aa23.45■■□□□ 1.35
CNEP1R1-202ENST00000427478 PRKCBP05771 671 aa23.45■■□□□ 1.35
CNEP1R1-202ENST00000427478 PIK3CAP42336 1068 aa23.45■■□□□ 1.35
CNEP1R1-202ENST00000427478 CLCN3P51790 818 aa23.45■■□□□ 1.35
CNEP1R1-202ENST00000427478 VSNL1P62760 191 aa23.45■■□□□ 1.35
CNEP1R1-202ENST00000427478 IGBP1P78318 339 aa23.45■■□□□ 1.35
CNEP1R1-202ENST00000427478 BIRC3Q13489 604 aa23.45■■□□□ 1.35
CNEP1R1-202ENST00000427478 ZACNQ401N2 412 aa23.45■■□□□ 1.35
CNEP1R1-202ENST00000427478 EFCAB12Q6NXP0 572 aa23.45■■□□□ 1.35
CNEP1R1-202ENST00000427478 ZNF572Q7Z3I7 529 aaPredicted RBP23.45■■□□□ 1.35
CNEP1R1-202ENST00000427478 ZNF467Q7Z7K2 595 aaPredicted RBP23.45■■□□□ 1.35
CNEP1R1-202ENST00000427478 ZBTB33Q86T24 672 aa23.45■■□□□ 1.35
CNEP1R1-202ENST00000427478 METTL13Q8N6R0 699 aa23.45■■□□□ 1.35
CNEP1R1-202ENST00000427478 MS4A14Q96JA4 679 aa23.45■■□□□ 1.35
CNEP1R1-202ENST00000427478 KATNBL1Q9H079 304 aa23.45■■□□□ 1.35
CNEP1R1-202ENST00000427478 ARFGAP3Q9NP61 516 aa23.45■■□□□ 1.35
CNEP1R1-202ENST00000427478 OSGEPQ9NPF4 335 aa23.45■■□□□ 1.35
CNEP1R1-202ENST00000427478 C1orf112Q9NSG2 853 aa23.45■■□□□ 1.35
CNEP1R1-202ENST00000427478 C4BPAP04003 597 aaKnown RBP23.45■■□□□ 1.34
CNEP1R1-202ENST00000427478 MAPK6Q16659 721 aa23.45■■□□□ 1.34
CNEP1R1-202ENST00000427478 RFFLQ8WZ73 363 aa23.45■■□□□ 1.34
CNEP1R1-202ENST00000427478 TCHPQ9BT92 498 aa23.45■■□□□ 1.34
CNEP1R1-202ENST00000427478 THAP2Q9H0W7 228 aa23.45■■□□□ 1.34
CNEP1R1-202ENST00000427478 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 ZC3H11AO75152 810 aaKnown RBP eCLIP23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 SNAI1O95863 264 aaPredicted RBP23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 HLA-DRAP01903 254 aa23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 CHRNB2P17787 502 aa23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 PAFAH1B1P43034 410 aa23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 GRB14Q14449 540 aa23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 SPATA4Q8NEY3 305 aa23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 AFG1LQ8WV93 481 aa23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 ARHGEF26Q96DR7 871 aa23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 C2orf40Q9H1Z8 148 aa23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 RBM47A0AV96 593 aaKnown RBP23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 TOM1L1O75674 476 aa23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 ZNF286BP0CG31 522 aa23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 RPS6KA1Q15418 735 aa23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 FAM110CQ1W6H9 321 aa23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 ILDR2Q71H61 639 aa23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 SLC35G2Q8TBE7 412 aa23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 MAML3Q96JK9 1138 aa23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 CGRRF1Q99675 332 aa23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 ACO2Q99798 780 aaKnown RBP23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 CNTNAP2Q9UHC6 1331 aa23.44■■□□□ 1.34
CNEP1R1-202ENST00000427478 ZSWIM8A7E2V4 1837 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms