RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 DUX4L2P0CJ85 424 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 DUX4L3P0CJ86 424 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 DUX4L4P0CJ87 422 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 DUX4L5P0CJ88 424 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 DUX4L6P0CJ89 424 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 DUX4L7P0CJ90 424 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 DUX4Q9UBX2 424 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 SYNDIG1Q9H7V2 258 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 IL1RL2Q9HB29 575 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 CACNA2D2Q9NY47 1150 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 CAPZA2P47755 286 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 RHPN2Q8IUC4 686 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 SNF8Q96H20 258 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 CCDC17Q96LX7 622 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 SELENONQ9NZV5 590 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 CEP72Q9P209 647 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 ZSWIM5Q9P217 1185 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 CD163L1Q9NR16 1453 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 RICTORQ6R327 1708 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 PDE8BO95263 885 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 HMOX2P30519 316 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 CAV1Q03135 178 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 RUNX1T1Q06455 604 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 SARM1Q6SZW1 724 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 CCDC103Q8IW40 242 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 SH3GL1Q99961 368 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 OLFML3Q9NRN5 406 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 FAM32AQ9Y421 112 aaKnown RBP13.25□□□□□ -0.29
HDLBP-214ENST00000427183 MIF4GDA9UHW6 222 aaKnown RBP13.25□□□□□ -0.29
HDLBP-214ENST00000427183 CLDN3O15551 220 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 DGKIO75912 1065 aa13.25□□□□□ -0.29
HDLBP-214ENST00000427183 CLK1P49759 484 aaKnown RBP13.25□□□□□ -0.29
HDLBP-214ENST00000427183 PUS7LQ9H0K6 701 aaKnown RBP13.25□□□□□ -0.29
HDLBP-214ENST00000427183 SH2B2O14492 632 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-214ENST00000427183 FTLP02792 175 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-214ENST00000427183 SDC4P31431 198 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 CHMP1BQ7LBR1 199 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 SPATA21Q7Z572 469 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 SFR1Q86XK3 245 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 CDCA7Q9BWT1 371 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-214ENST00000427183 TRIM54Q9BYV2 358 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 TAF1DQ9H5J8 278 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-214ENST00000427183 RERGLQ9H628 205 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 EML4Q9HC35 981 aaKnown RBP13.24□□□□□ -0.29
HDLBP-214ENST00000427183 C20orf96Q9NUD7 363 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-214ENST00000427183 SLC9A2Q9UBY0 812 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 USP27XA6NNY8 438 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 M0R3G1 203 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 STXBP3O00186 592 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 PLEKHA8P1O95397 391 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 SESN2P58004 480 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-214ENST00000427183 MKRN4PQ13434 485 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-214ENST00000427183 MAPRE2Q15555 327 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 USPL1Q5W0Q7 1092 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 SLFN12LQ6IEE8 588 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 ADCK2Q7Z695 626 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 CYFIP2Q96F07 1278 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 AGAP3Q96P47 875 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 PRPF18Q99633 342 aaKnown RBP13.24□□□□□ -0.29
HDLBP-214ENST00000427183 GCOM2Q9BZD3 368 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-214ENST00000427183 H2AFY2Q9P0M6 372 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-214ENST00000427183 POTEMA6NI47 508 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 SLC16A4O15374 487 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 ARSEP51690 589 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 PLOD1Q02809 727 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-214ENST00000427183 MTERF3Q96E29 417 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 ZFP42Q96MM3 310 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 ZNF556Q9HAH1 456 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 MKL2Q9ULH7 1088 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 DLGAP3O95886 979 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 SERPINB1P30740 379 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 ARHGAP17Q68EM7 881 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 SLC30A9Q6PML9 568 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 THTPAQ9BU02 230 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 BRD8Q9H0E9 1235 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 SPATA31D1Q6ZQQ2 1576 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 AIM2O14862 343 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 SEMA3EO15041 775 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 PCP11498 1178 aaKnown RBP13.24□□□□□ -0.29
HDLBP-214ENST00000427183 USP14P54578 494 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 BCAR1P56945 870 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 KHDRBS2Q5VWX1 349 aaKnown RBP13.24□□□□□ -0.29
HDLBP-214ENST00000427183 PID1Q7Z2X4 250 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 RIN3Q8TB24 985 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 PLEKHA8Q96JA3 519 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 CDHR1Q96JP9 859 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 NDEL1Q9GZM8 345 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 WWP1Q9H0M0 922 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 ATP6V0A4Q9HBG4 840 aa13.24□□□□□ -0.29
HDLBP-214ENST00000427183 C6orf203Q9P0P8 240 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-214ENST00000427183 PPEF1O14829 653 aaPredicted RBP13.23□□□□□ -0.29
HDLBP-214ENST00000427183 HUS1O60921 280 aa13.23□□□□□ -0.29
HDLBP-214ENST00000427183 HSPA9P38646 679 aaKnown RBP13.23□□□□□ -0.29
HDLBP-214ENST00000427183 PPP3CCP48454 512 aa13.23□□□□□ -0.29
HDLBP-214ENST00000427183 RESTQ13127 1097 aa13.23□□□□□ -0.29
HDLBP-214ENST00000427183 ANKS3Q6ZW76 656 aa13.23□□□□□ -0.29
HDLBP-214ENST00000427183 MFN1Q8IWA4 741 aa13.23□□□□□ -0.29
HDLBP-214ENST00000427183 ATP11CQ8NB49 1132 aa13.23□□□□□ -0.29
HDLBP-214ENST00000427183 CATSPER1Q8NEC5 780 aa13.23□□□□□ -0.29
HDLBP-214ENST00000427183 DPYSL4O14531 572 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms