RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 SPATA31D3P0C874 917 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 NPR3P17342 541 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 RPL17P18621 184 aaKnown RBP11.12□□□□□ -0.63
GACAT3-201ENST00000426539 CYP11B2P19099 503 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 GRIK3Q13003 919 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 ECM1Q16610 540 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 CWF19L1Q69YN2 538 aaKnown RBP11.12□□□□□ -0.63
GACAT3-201ENST00000426539 LILRA6Q6PI73 481 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 PADI6Q6TGC4 694 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 SPATA31D4Q6ZUB0 917 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 CCDC83Q8IWF9 413 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 C4orf32Q8N8J7 132 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 MCPH1Q8NEM0 835 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 PRIMPOLQ96LW4 560 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 CCDC43Q96MW1 224 aaKnown RBP11.12□□□□□ -0.63
GACAT3-201ENST00000426539 NACC1Q96RE7 527 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 RHOBTB2Q9BYZ6 727 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 CCDC113Q9H0I3 377 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 PDZD7Q9H5P4 517 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 KCNK12Q9HB15 430 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 WDR6Q9NNW5 1121 aaKnown RBP11.12□□□□□ -0.63
GACAT3-201ENST00000426539 PRMT7Q9NVM4 692 aaPredicted RBP11.12□□□□□ -0.63
GACAT3-201ENST00000426539 SSX2IPQ9Y2D8 614 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 ZMYM2Q9UBW7 1377 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 TGM5O43548 720 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 NARSO43776 548 aaKnown RBP11.11□□□□□ -0.63
GACAT3-201ENST00000426539 IGFBP6P24592 240 aaPredicted RBP11.11□□□□□ -0.63
GACAT3-201ENST00000426539 RPA1P27694 616 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 TUSC3Q13454 348 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 TDGQ13569 410 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 NBR1Q14596 966 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 NAB2Q15742 525 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 RTP2Q5QGT7 225 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 EEF1DP3Q658K8 133 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 PRSS55Q6UWB4 352 aaPredicted RBP11.11□□□□□ -0.63
GACAT3-201ENST00000426539 PALB2Q86YC2 1186 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 GPR65Q8IYL9 337 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 HACE1Q8IYU2 909 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 RSAD2Q8WXG1 361 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 RIN2Q8WYP3 895 aaPredicted RBP11.11□□□□□ -0.63
GACAT3-201ENST00000426539 ACSF2Q96CM8 615 aaPredicted RBP11.11□□□□□ -0.63
GACAT3-201ENST00000426539 C8orf76Q96K31 380 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 MYADMQ96S97 322 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 KIF2CQ99661 725 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 KIFC3Q9BVG8 833 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 FOXP1Q9H334 677 aaPredicted RBP11.11□□□□□ -0.63
GACAT3-201ENST00000426539 POLD4Q9HCU8 107 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 SNTG2Q9NY99 539 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 FNIP2Q9P278 1114 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 ADAM28Q9UKQ2 775 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 DUSP12Q9UNI6 340 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 LIMCH1Q9UPQ0 1083 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 MYO10Q9HD67 2058 aa11.11□□□□□ -0.63
GACAT3-201ENST00000426539 CLUHO75153 1309 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 CASTOR2A6NHX0 329 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 ACKR2O00590 384 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 PI15O43692 258 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 NR1I2O75469 434 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 RECQL4O94761 1208 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 KIF4AO95239 1232 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 C1RP00736 705 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 PRKCBP05771 671 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 PRPF4BQ13523 1007 aaKnown RBP11.1□□□□□ -0.63
GACAT3-201ENST00000426539 HSP90AA2PQ14568 343 aaPredicted RBP11.1□□□□□ -0.63
GACAT3-201ENST00000426539 SAFBQ15424 915 aaKnown RBP eCLIP11.1□□□□□ -0.63
GACAT3-201ENST00000426539 USP41Q3LFD5 358 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 TTC38Q5R3I4 469 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 CYP26C1Q6V0L0 522 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 NOSTRINQ8IVI9 506 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 GLYCTKQ8IVS8 523 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 ZBTB8OSQ8IWT0 167 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 PDCD7Q8N8D1 485 aaKnown RBP11.1□□□□□ -0.63
GACAT3-201ENST00000426539 FBXO18Q8NFZ0 1043 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 HASPINQ8TF76 798 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 HDAC7Q8WUI4 952 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 SMG7Q92540 1137 aaKnown RBP11.1□□□□□ -0.63
GACAT3-201ENST00000426539 ATOH1Q92858 354 aaPredicted RBP11.1□□□□□ -0.63
GACAT3-201ENST00000426539 LLPHQ9BRT6 129 aaKnown RBP11.1□□□□□ -0.63
GACAT3-201ENST00000426539 NT5C3AQ9H0P0 336 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.1□□□□□ -0.63
GACAT3-201ENST00000426539 EPS15L1Q9UBC2 864 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 PLXNA3P51805 1871 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 CACNA1HO95180 2353 aa11.1□□□□□ -0.63
GACAT3-201ENST00000426539 C2orf16Q68DN1 1984 aa11.09□□□□□ -0.63
GACAT3-201ENST00000426539 ARHGEF35A5YM69 484 aa11.09□□□□□ -0.63
GACAT3-201ENST00000426539 N4BP3O15049 544 aa11.09□□□□□ -0.63
GACAT3-201ENST00000426539 ADAM12O43184 909 aa11.09□□□□□ -0.63
GACAT3-201ENST00000426539 TADA2AO75478 443 aa11.09□□□□□ -0.63
GACAT3-201ENST00000426539 LIG1P18858 919 aa11.09□□□□□ -0.63
GACAT3-201ENST00000426539 NAMPTP43490 491 aa11.09□□□□□ -0.63
GACAT3-201ENST00000426539 TOB1P50616 345 aaPredicted RBP11.09□□□□□ -0.63
GACAT3-201ENST00000426539 CLCN5P51795 746 aa11.09□□□□□ -0.63
GACAT3-201ENST00000426539 ORC2Q13416 577 aaPredicted RBP11.09□□□□□ -0.63
GACAT3-201ENST00000426539 MAPK6Q16659 721 aa11.09□□□□□ -0.63
GACAT3-201ENST00000426539 NT5DC1Q5TFE4 455 aa11.09□□□□□ -0.63
GACAT3-201ENST00000426539 ERICH6BQ5W0A0 696 aa11.09□□□□□ -0.63
GACAT3-201ENST00000426539 CD300LGQ6UXG3 332 aa11.09□□□□□ -0.63
GACAT3-201ENST00000426539 ERMNQ8TAM6 284 aa11.09□□□□□ -0.63
GACAT3-201ENST00000426539 LNX1Q8TBB1 728 aaPredicted RBP11.09□□□□□ -0.63
GACAT3-201ENST00000426539 CLSTN3Q9BQT9 956 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms