RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 TXKP42681 527 aa13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 STARD6P59095 220 aa13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 PPP2R5DQ14738 602 aa13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 PPP2R5AQ15172 486 aa13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 SAFBQ15424 915 aaKnown RBP eCLIP13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 MAPK6Q16659 721 aa13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 LILRA6Q6PI73 481 aa13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 GRASPQ7Z6J2 395 aaPredicted RBP13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 KIAA2013Q8IYS2 634 aa13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 RNF168Q8IYW5 571 aaPredicted RBP13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 DEPTORQ8TB45 409 aa13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 HAS1Q92839 578 aa13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 NACC1Q96RE7 527 aa13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 LARP6Q9BRS8 491 aaKnown RBP13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 GPR62Q9BZJ7 368 aa13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 SPATA6Q9NWH7 488 aaPredicted RBP13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 KLK14Q9P0G3 267 aa13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 NUMBLQ9Y6R0 609 aa13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 STK36Q9NRP7 1315 aa13.57□□□□□ -0.24
HLA-DQB3-203ENST00000425319 KANSL1LA0AUZ9 987 aa13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 B4GALT3O60512 393 aa13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 SP9P0CG40 484 aa13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 MBTD1Q05BQ5 628 aa13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 PRPF4BQ13523 1007 aaKnown RBP13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 CAPSQ13938 189 aa13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 UBXN2BQ14CS0 331 aa13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 PSMD5Q16401 504 aa13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 SLC44A4Q53GD3 710 aa13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 ZBTB41Q5SVQ8 909 aa13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 POTEDQ86YR6 584 aa13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 PIK3R5Q8WYR1 880 aa13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 ZNF707Q96C28 371 aaPredicted RBP13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 IFT74Q96LB3 600 aa13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 AIFM3Q96NN9 605 aa13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 HSD17B14Q9BPX1 270 aa13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 OSBPL6Q9BZF3 934 aa13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 POLR3FQ9H1D9 316 aaPredicted RBP13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 NXF3Q9H4D5 531 aaKnown RBP13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 WRAP73Q9P2S5 460 aaPredicted RBP13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 NCDNQ9UBB6 729 aa13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 FBXO4Q9UKT5 387 aa13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 R4GN57 208 aa13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 ZDBF2Q9HCK1 2354 aa13.56□□□□□ -0.24
HLA-DQB3-203ENST00000425319 KMT2EQ8IZD2 1858 aa13.55□□□□□ -0.24
HLA-DQB3-203ENST00000425319 ZBTB39O15060 712 aa13.55□□□□□ -0.24
HLA-DQB3-203ENST00000425319 NEMFO60524 1076 aa13.55□□□□□ -0.24
HLA-DQB3-203ENST00000425319 USO1O60763 962 aaKnown RBP13.55□□□□□ -0.24
HLA-DQB3-203ENST00000425319 N4BP1O75113 896 aaKnown RBP13.55□□□□□ -0.24
HLA-DQB3-203ENST00000425319 C8AP07357 584 aa13.55□□□□□ -0.24
HLA-DQB3-203ENST00000425319 YARSP54577 528 aaKnown RBP13.55□□□□□ -0.24
HLA-DQB3-203ENST00000425319 GPC5P78333 572 aa13.55□□□□□ -0.24
HLA-DQB3-203ENST00000425319 SNW1Q13573 536 aaKnown RBP13.55□□□□□ -0.24
HLA-DQB3-203ENST00000425319 HTR4Q13639 388 aa13.55□□□□□ -0.24
HLA-DQB3-203ENST00000425319 ZNF528Q3MIS6 628 aa13.55□□□□□ -0.24
HLA-DQB3-203ENST00000425319 MAEAQ7L5Y9 396 aa13.55□□□□□ -0.24
HLA-DQB3-203ENST00000425319 PJA1Q8NG27 643 aa13.55□□□□□ -0.24
HLA-DQB3-203ENST00000425319 UROC1Q96N76 676 aa13.55□□□□□ -0.24
HLA-DQB3-203ENST00000425319 TUFT1Q9NNX1 390 aa13.55□□□□□ -0.24
HLA-DQB3-203ENST00000425319 KCNH3Q9ULD8 1083 aa13.55□□□□□ -0.24
HLA-DQB3-203ENST00000425319 STK24Q9Y6E0 443 aa13.55□□□□□ -0.24
HLA-DQB3-203ENST00000425319 ARHGEF35A5YM69 484 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 FAM170BA6NMN3 283 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 ZNF197O14709 1029 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 SPTLC1O15269 473 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 PFKFB2O60825 505 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 PAPLNO95428 1278 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 EFEMP2O95967 443 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 LRG1P02750 347 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 RPL17P18621 184 aaKnown RBP13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 LIG1P18858 919 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 GLRA2P23416 452 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 RARRES1P49788 294 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 EFNA5P52803 228 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 SCRN1Q12765 414 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 NPY5RQ15761 445 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 MLF2Q15773 248 aaPredicted RBP13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 AXDND1Q5T1B0 1012 aaPredicted RBP13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 PRSS55Q6UWB4 352 aaPredicted RBP13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 PPP4R3CPQ6ZMV5 832 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 ANKS3Q6ZW76 656 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 ELMOD1Q8N336 334 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 ASAP3Q8TDY4 903 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 PIGOQ8TEQ8 1089 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 B3GALT6Q96L58 329 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 XPNPEP1Q9NQW7 623 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 FBXW11Q9UKB1 542 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 RAB23Q9ULC3 237 aa13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 MRPS23Q9Y3D9 190 aaKnown RBP13.54□□□□□ -0.24
HLA-DQB3-203ENST00000425319 ZFHX2Q9C0A1 2572 aaPredicted RBP13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 CASTOR2A6NHX0 329 aa13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 CCL16O15467 120 aa13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 B3GAT3O94766 335 aa13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 PTPN2P17706 415 aa13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 OR1D2P34982 312 aa13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 NRLP54845 237 aa13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 RAB33AQ14088 237 aa13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 FAM187BQ17R55 369 aa13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 DCAF4L1Q3SXM0 396 aa13.53□□□□□ -0.24
HLA-DQB3-203ENST00000425319 PABPC1LQ4VXU2 614 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms