RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 TRIP11Q15643 1979 aa18.53■□□□□ 0.56
COL7A1-202ENST00000422991 CALUO43852 315 aaPredicted RBP18.53■□□□□ 0.56
COL7A1-202ENST00000422991 GJB5O95377 273 aa18.53■□□□□ 0.56
COL7A1-202ENST00000422991 FGFR1P11362 822 aa18.53■□□□□ 0.56
COL7A1-202ENST00000422991 CCNE1P24864 410 aa18.53■□□□□ 0.56
COL7A1-202ENST00000422991 PMS1P54277 932 aaKnown RBP18.53■□□□□ 0.56
COL7A1-202ENST00000422991 OSTNP61366 133 aa18.53■□□□□ 0.56
COL7A1-202ENST00000422991 PAK1Q13153 545 aa18.53■□□□□ 0.56
COL7A1-202ENST00000422991 NFIL3Q16649 462 aa18.53■□□□□ 0.56
COL7A1-202ENST00000422991 KYAT1Q16773 422 aa18.53■□□□□ 0.56
COL7A1-202ENST00000422991 EDRF1Q3B7T1 1238 aa18.53■□□□□ 0.56
COL7A1-202ENST00000422991 SEZ6Q53EL9 994 aa18.53■□□□□ 0.56
COL7A1-202ENST00000422991 CLLU1OSQ5K130 101 aa18.53■□□□□ 0.56
COL7A1-202ENST00000422991 KLHL10Q6JEL2 608 aa18.53■□□□□ 0.56
COL7A1-202ENST00000422991 SLC9A9Q8IVB4 645 aa18.53■□□□□ 0.56
COL7A1-202ENST00000422991 ZSWIM2Q8NEG5 633 aa18.53■□□□□ 0.56
COL7A1-202ENST00000422991 NELFBQ8WX92 580 aa18.53■□□□□ 0.56
COL7A1-202ENST00000422991 SAAL1Q96ER3 474 aa18.53■□□□□ 0.56
COL7A1-202ENST00000422991 RSAD1Q9HA92 442 aa18.53■□□□□ 0.56
COL7A1-202ENST00000422991 DMAC2Q9NW81 257 aa18.53■□□□□ 0.56
COL7A1-202ENST00000422991 TDRD15B5MCY1 1934 aaKnown RBP18.53■□□□□ 0.56
COL7A1-202ENST00000422991 TRIM49BA6NDI0 452 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 INPPL1O15357 1258 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 HOXA2O43364 376 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 EXTL3O43909 919 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 DGKIO75912 1065 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 NR3C1P04150 777 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 CLTAP09496 248 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 AKAP5P24588 427 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 TNFSF9P41273 254 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 GATMP50440 423 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 CYP2J2P51589 502 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 LRRC63Q05C16 580 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 STX1AQ16623 288 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 ZSCAN23Q3MJ62 389 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 FAM109BQ6ICB4 259 aaPredicted RBP18.52■□□□□ 0.56
COL7A1-202ENST00000422991 FAM117BQ6P1L5 589 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 FOXR2Q6PJQ5 311 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 CRELD2Q6UXH1 353 aaPredicted RBP18.52■□□□□ 0.56
COL7A1-202ENST00000422991 GPD1LQ8N335 351 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 HELQQ8TDG4 1101 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 FBXL18Q96ME1 805 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 TSG101Q99816 390 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 UBN1Q9NPG3 1134 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 ANO10Q9NW15 660 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 PARP2Q9UGN5 583 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 DACH1Q9UI36 760 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 CPSF3Q9UKF6 684 aaKnown RBP18.52■□□□□ 0.56
COL7A1-202ENST00000422991 GIT1Q9Y2X7 761 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 CHD9Q3L8U1 2897 aa18.52■□□□□ 0.56
COL7A1-202ENST00000422991 KIAA1671Q9BY89 1806 aa18.51■□□□□ 0.55
COL7A1-202ENST00000422991 SYCE3A1L190 88 aa18.51■□□□□ 0.55
COL7A1-202ENST00000422991 GOLGA8IPA6NC78 632 aa18.51■□□□□ 0.55
COL7A1-202ENST00000422991 GOLGA8JA6NMD2 632 aa18.51■□□□□ 0.55
COL7A1-202ENST00000422991 MEFVO15553 781 aaPredicted RBP18.51■□□□□ 0.55
COL7A1-202ENST00000422991 LDHAP00338 332 aaKnown RBP18.51■□□□□ 0.55
COL7A1-202ENST00000422991 CXCL8P10145 99 aa18.51■□□□□ 0.55
COL7A1-202ENST00000422991 ACOT2P49753 483 aa18.51■□□□□ 0.55
COL7A1-202ENST00000422991 HTRA4P83105 476 aaPredicted RBP18.51■□□□□ 0.55
COL7A1-202ENST00000422991 TYRO3Q06418 890 aa18.51■□□□□ 0.55
COL7A1-202ENST00000422991 MYBPC2Q14324 1141 aa18.51■□□□□ 0.55
COL7A1-202ENST00000422991 ENOX2Q16206 610 aaKnown RBP18.51■□□□□ 0.55
COL7A1-202ENST00000422991 ANKRD40Q6AI12 368 aa18.51■□□□□ 0.55
COL7A1-202ENST00000422991 TTI2Q6NXR4 508 aa18.51■□□□□ 0.55
COL7A1-202ENST00000422991 GLB1LQ6UWU2 654 aa18.51■□□□□ 0.55
COL7A1-202ENST00000422991 ZC3H3Q8IXZ2 948 aaKnown RBP18.51■□□□□ 0.55
COL7A1-202ENST00000422991 XXYLT1Q8NBI6 393 aa18.51■□□□□ 0.55
COL7A1-202ENST00000422991 ZNF689Q96CS4 500 aaPredicted RBP18.51■□□□□ 0.55
COL7A1-202ENST00000422991 SNX27Q96L92 541 aa18.51■□□□□ 0.55
COL7A1-202ENST00000422991 ACAP3Q96P50 834 aa18.51■□□□□ 0.55
COL7A1-202ENST00000422991 FAM213AQ9BRX8 229 aa18.51■□□□□ 0.55
COL7A1-202ENST00000422991 TMEM117Q9H0C3 514 aa18.51■□□□□ 0.55
COL7A1-202ENST00000422991 TOPORSQ9NS56 1045 aaPredicted RBP18.51■□□□□ 0.55
COL7A1-202ENST00000422991 BICDL2A1A5D9 508 aa18.5■□□□□ 0.55
COL7A1-202ENST00000422991 ARL5CA6NH57 179 aa18.5■□□□□ 0.55
COL7A1-202ENST00000422991 OFD1O75665 1012 aa18.5■□□□□ 0.55
COL7A1-202ENST00000422991 NR2F2P24468 414 aa18.5■□□□□ 0.55
COL7A1-202ENST00000422991 MLH1P40692 756 aa18.5■□□□□ 0.55
COL7A1-202ENST00000422991 YARSP54577 528 aaKnown RBP18.5■□□□□ 0.55
COL7A1-202ENST00000422991 POU5F1Q01860 360 aaKnown RBP18.5■□□□□ 0.55
COL7A1-202ENST00000422991 RSPH1Q8WYR4 309 aa18.5■□□□□ 0.55
COL7A1-202ENST00000422991 ZFP42Q96MM3 310 aa18.5■□□□□ 0.55
COL7A1-202ENST00000422991 CASD1Q96PB1 797 aa18.5■□□□□ 0.55
COL7A1-202ENST00000422991 GAD1Q99259 594 aa18.5■□□□□ 0.55
COL7A1-202ENST00000422991 FUCA2Q9BTY2 467 aa18.5■□□□□ 0.55
COL7A1-202ENST00000422991 KIAA1586Q9HCI6 787 aa18.5■□□□□ 0.55
COL7A1-202ENST00000422991 KLK14Q9P0G3 267 aa18.5■□□□□ 0.55
COL7A1-202ENST00000422991 RWDD2AQ9UIY3 292 aa18.5■□□□□ 0.55
COL7A1-202ENST00000422991 GRXCR1A8MXD5 290 aa18.49■□□□□ 0.55
COL7A1-202ENST00000422991 EXOC3O60645 756 aa18.49■□□□□ 0.55
COL7A1-202ENST00000422991 ADRB2P07550 413 aa18.49■□□□□ 0.55
COL7A1-202ENST00000422991 RPL13P26373 211 aaKnown RBP18.49■□□□□ 0.55
COL7A1-202ENST00000422991 STX17P56962 302 aa18.49■□□□□ 0.55
COL7A1-202ENST00000422991 SMAD3P84022 425 aaKnown RBP18.49■□□□□ 0.55
COL7A1-202ENST00000422991 HSP90AA2PQ14568 343 aaPredicted RBP18.49■□□□□ 0.55
COL7A1-202ENST00000422991 SNRNP35Q16560 246 aaKnown RBP18.49■□□□□ 0.55
COL7A1-202ENST00000422991 SLC10A6Q3KNW5 377 aa18.49■□□□□ 0.55
COL7A1-202ENST00000422991 XKR4Q5GH76 650 aa18.49■□□□□ 0.55
COL7A1-202ENST00000422991 NOMO2Q5JPE7 1267 aa18.49■□□□□ 0.55
COL7A1-202ENST00000422991 CT47A1Q5JQC4 288 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms