RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 PPTC7Q8NI37 304 aa9.78□□□□□ -0.84
LINCMD1-201ENST00000418518 U2AF1L4Q8WU68 220 aaKnown RBP9.78□□□□□ -0.84
LINCMD1-201ENST00000418518 PRPF31Q8WWY3 499 aaKnown RBP9.78□□□□□ -0.84
LINCMD1-201ENST00000418518 GLG1Q92896 1179 aa9.78□□□□□ -0.84
LINCMD1-201ENST00000418518 AGPAT1Q99943 283 aa9.78□□□□□ -0.84
LINCMD1-201ENST00000418518 MRPL4Q9BYD3 311 aaKnown RBP9.78□□□□□ -0.84
LINCMD1-201ENST00000418518 ISCUQ9H1K1 167 aa9.78□□□□□ -0.84
LINCMD1-201ENST00000418518 CLEC11AQ9Y240 323 aa9.78□□□□□ -0.84
LINCMD1-201ENST00000418518 STXBP5LQ9Y2K9 1186 aa9.78□□□□□ -0.84
LINCMD1-201ENST00000418518 SLC15A5A6NIM6 579 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 ZNF185O15231 689 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 SRGAP2O75044 1071 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 TOM1L1O75674 476 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 MTA2O94776 668 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 C22orf31O95567 290 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 LGALS2P05162 132 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 CHRNB2P17787 502 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 TNFAIP3P21580 790 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 MAPK4P31152 587 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 AP3M2P53677 418 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 MCL1Q07820 350 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 FAM187BQ17R55 369 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 NFRKBQ6P4R8 1299 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 GPR142Q7Z601 462 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 ZBTB8OSQ8IWT0 167 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 SYCE1Q8N0S2 351 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 COG1Q8WTW3 980 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 LMBR1Q8WVP7 490 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 ZNF516Q92618 1163 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 COPS5Q92905 334 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 KAT5Q92993 513 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 CCDC127Q96BQ5 260 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 PNKPQ96T60 521 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 ACO2Q99798 780 aaKnown RBP9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 FAM213AQ9BRX8 229 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 MSTO1Q9BUK6 570 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 TARS2Q9BW92 718 aaKnown RBP9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 FZD8Q9H461 694 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 PTPRHQ9HD43 1115 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 ABCB6Q9NP58 842 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 PDGFCQ9NRA1 345 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 ERAP1Q9NZ08 941 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 OGFRQ9NZT2 677 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 SUCLA2Q9P2R7 463 aaPredicted RBP9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 IVNS1ABPQ9Y6Y0 642 aa9.77□□□□□ -0.85
LINCMD1-201ENST00000418518 OGTO15294 1046 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 MAGEB2O15479 319 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 NCK2O43639 380 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 RTN2O75298 545 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 KIF4AO95239 1232 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 CELF2O95319 508 aaKnown RBP9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 VNN1O95497 513 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 SNAI1O95863 264 aaPredicted RBP9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 HLA-DRAP01903 254 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 PRKCBP05771 671 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 MCM3P25205 808 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 MARK3P27448 753 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 WNT7BP56706 349 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 PTENP60484 403 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 FMO1Q01740 532 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 POU5F1Q01860 360 aaKnown RBP9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 TFDP1Q14186 410 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 SURF1Q15526 300 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 TMEM63BQ5T3F8 832 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 WDR78Q5VTH9 848 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 TDRD10Q5VZ19 366 aaKnown RBP9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 TMCO3Q6UWJ1 677 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 TSHZ1Q6ZSZ6 1077 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 PLEKHH3Q7Z736 793 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 NOP9Q86U38 636 aaKnown RBP9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 PALB2Q86YC2 1186 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 WDR49Q8IV35 697 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 RHOT2Q8IXI1 618 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 PPM1KQ8N3J5 372 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 SLC20A1Q8WUM9 679 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 CTNNBL1Q8WYA6 563 aaPredicted RBP9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 DDX1Q92499 740 aaKnown RBP9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 MAML3Q96JK9 1138 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 ZBTB45Q96K62 511 aaPredicted RBP9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 PBKQ96KB5 322 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 CAPZA3Q96KX2 299 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 FNBP1Q96RU3 617 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 POP1Q99575 1024 aaKnown RBP9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 PTPN18Q99952 460 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 EPC1Q9H2F5 836 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 ZNF408Q9H9D4 720 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 RBAKQ9NYW8 714 aaPredicted RBP9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 CNTN6Q9UQ52 1028 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 PTPRJQ12913 1337 aa9.76□□□□□ -0.85
LINCMD1-201ENST00000418518 TRIP12Q14669 1992 aaPredicted RBP9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 CASP8AP2Q9UKL3 1982 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 ACKR2O00590 384 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 ERLIN1O75477 346 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 SGPL1O95470 568 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 TBC1D8O95759 1140 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 FTCDO95954 541 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 HOXC6P09630 235 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 DLATP10515 647 aaKnown RBP9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 TNFRSF8P28908 595 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms