RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 NUCKS1Q9H1E3 243 aaKnown RBP22.54■■□□□ 1.2
CASC3-203ENST00000418132 CDT1Q9H211 546 aa22.54■■□□□ 1.2
CASC3-203ENST00000418132 CDHR5Q9HBB8 845 aa22.54■■□□□ 1.2
CASC3-203ENST00000418132 NLRC4Q9NPP4 1024 aa22.54■■□□□ 1.2
CASC3-203ENST00000418132 WBP1LQ9NX94 342 aa22.54■■□□□ 1.2
CASC3-203ENST00000418132 CPSF3Q9UKF6 684 aaKnown RBP22.54■■□□□ 1.2
CASC3-203ENST00000418132 COQ4Q9Y3A0 265 aa22.54■■□□□ 1.2
CASC3-203ENST00000418132 LRRC53A6NM62 1247 aa22.54■■□□□ 1.2
CASC3-203ENST00000418132 TSPAN1O60635 241 aa22.54■■□□□ 1.2
CASC3-203ENST00000418132 MYCNP04198 464 aaPredicted RBP22.54■■□□□ 1.2
CASC3-203ENST00000418132 DARSP14868 501 aaKnown RBP22.54■■□□□ 1.2
CASC3-203ENST00000418132 WNT7BP56706 349 aa22.54■■□□□ 1.2
CASC3-203ENST00000418132 PCBP1Q15365 356 aaKnown RBP eCLIP22.54■■□□□ 1.2
CASC3-203ENST00000418132 E4F1Q66K89 784 aaPredicted RBP22.54■■□□□ 1.2
CASC3-203ENST00000418132 KRT39Q6A163 491 aa22.54■■□□□ 1.2
CASC3-203ENST00000418132 GDF6Q6KF10 455 aaPredicted RBP22.54■■□□□ 1.2
CASC3-203ENST00000418132 BRSK2Q8IWQ3 736 aa22.54■■□□□ 1.2
CASC3-203ENST00000418132 EHBP1Q8NDI1 1231 aa22.54■■□□□ 1.2
CASC3-203ENST00000418132 INTS2Q9H0H0 1204 aaKnown RBP22.54■■□□□ 1.2
CASC3-203ENST00000418132 PDZD7Q9H5P4 517 aa22.54■■□□□ 1.2
CASC3-203ENST00000418132 ZNHIT6Q9NWK9 470 aaKnown RBP22.54■■□□□ 1.2
CASC3-203ENST00000418132 GRIN2DO15399 1336 aa22.53■■□□□ 1.2
CASC3-203ENST00000418132 SOWAHDA6NJG2 315 aa22.53■■□□□ 1.2
CASC3-203ENST00000418132 CABYRO75952 493 aa22.53■■□□□ 1.2
CASC3-203ENST00000418132 ERLIN2O94905 339 aa22.53■■□□□ 1.2
CASC3-203ENST00000418132 DLATP10515 647 aaKnown RBP22.53■■□□□ 1.2
CASC3-203ENST00000418132 CDK17Q00537 523 aa22.53■■□□□ 1.2
CASC3-203ENST00000418132 SEZ6Q53EL9 994 aa22.53■■□□□ 1.2
CASC3-203ENST00000418132 SYN2Q92777 582 aaPredicted RBP22.53■■□□□ 1.2
CASC3-203ENST00000418132 OSMRQ99650 979 aa22.53■■□□□ 1.2
CASC3-203ENST00000418132 PDE11AQ9HCR9 933 aa22.53■■□□□ 1.2
CASC3-203ENST00000418132 TOPORSQ9NS56 1045 aaPredicted RBP22.53■■□□□ 1.2
CASC3-203ENST00000418132 GINS2Q9Y248 185 aa22.53■■□□□ 1.2
CASC3-203ENST00000418132 FRMPD3Q5JV73 1810 aa22.53■■□□□ 1.2
CASC3-203ENST00000418132 MCF2P10911 925 aa22.52■■□□□ 1.2
CASC3-203ENST00000418132 EIF4BP23588 611 aaKnown RBP22.52■■□□□ 1.2
CASC3-203ENST00000418132 TNFSF9P41273 254 aa22.52■■□□□ 1.2
CASC3-203ENST00000418132 ACLYP53396 1101 aa22.52■■□□□ 1.2
CASC3-203ENST00000418132 RAD9BQ6WBX8 426 aa22.52■■□□□ 1.2
CASC3-203ENST00000418132 CDR2LQ86X02 465 aaPredicted RBP22.52■■□□□ 1.2
CASC3-203ENST00000418132 FNBP1Q96RU3 617 aa22.52■■□□□ 1.2
CASC3-203ENST00000418132 CHP1Q99653 195 aa22.52■■□□□ 1.2
CASC3-203ENST00000418132 DAAM1Q9Y4D1 1078 aa22.52■■□□□ 1.2
CASC3-203ENST00000418132 FHOD1Q9Y613 1164 aa22.52■■□□□ 1.2
CASC3-203ENST00000418132 A0A1B0GUA9 196 aa22.52■■□□□ 1.2
CASC3-203ENST00000418132 C15orf39Q6ZRI6 1047 aa22.52■■□□□ 1.2
CASC3-203ENST00000418132 SV2AQ7L0J3 742 aa22.52■■□□□ 1.2
CASC3-203ENST00000418132 SERINC5Q86VE9 423 aa22.52■■□□□ 1.2
CASC3-203ENST00000418132 CPB2Q96IY4 423 aa22.52■■□□□ 1.2
CASC3-203ENST00000418132 TSEN34Q9BSV6 310 aaKnown RBP22.52■■□□□ 1.2
CASC3-203ENST00000418132 MYO6Q9UM54 1294 aa22.52■■□□□ 1.2
CASC3-203ENST00000418132 MOXD2PA6NHM9 499 aa22.51■■□□□ 1.19
CASC3-203ENST00000418132 CRYBB1P53674 252 aaPredicted RBP22.51■■□□□ 1.19
CASC3-203ENST00000418132 MTF1Q14872 753 aa22.51■■□□□ 1.19
CASC3-203ENST00000418132 FAM47CQ5HY64 1035 aa22.51■■□□□ 1.19
CASC3-203ENST00000418132 CCAR2Q8N163 923 aaKnown RBP22.51■■□□□ 1.19
CASC3-203ENST00000418132 ZNF516Q92618 1163 aa22.51■■□□□ 1.19
CASC3-203ENST00000418132 CGRRF1Q99675 332 aa22.51■■□□□ 1.19
CASC3-203ENST00000418132 APEX2Q9UBZ4 518 aa22.51■■□□□ 1.19
CASC3-203ENST00000418132 PTPN22Q9Y2R2 807 aa22.51■■□□□ 1.19
CASC3-203ENST00000418132 SNX17Q15036 470 aa22.5■■□□□ 1.19
CASC3-203ENST00000418132 THNSL1Q8IYQ7 743 aa22.5■■□□□ 1.19
CASC3-203ENST00000418132 TNNI1P19237 187 aa22.5■■□□□ 1.19
CASC3-203ENST00000418132 FGFR4P22455 802 aa22.5■■□□□ 1.19
CASC3-203ENST00000418132 IQCEQ6IPM2 695 aa22.5■■□□□ 1.19
CASC3-203ENST00000418132 CATSPER4Q7RTX7 472 aa22.5■■□□□ 1.19
CASC3-203ENST00000418132 RPAINQ86UA6 219 aa22.5■■□□□ 1.19
CASC3-203ENST00000418132 CEP120Q8N960 986 aa22.5■■□□□ 1.19
CASC3-203ENST00000418132 FBXL13Q8NEE6 735 aa22.5■■□□□ 1.19
CASC3-203ENST00000418132 SH3TC2Q8TF17 1288 aa22.5■■□□□ 1.19
CASC3-203ENST00000418132 TMEM40Q8WWA1 233 aa22.5■■□□□ 1.19
CASC3-203ENST00000418132 AIPL1Q9NZN9 384 aa22.5■■□□□ 1.19
CASC3-203ENST00000418132 AJAP1Q9UKB5 411 aaPredicted RBP22.5■■□□□ 1.19
CASC3-203ENST00000418132 PTPRJQ12913 1337 aa22.49■■□□□ 1.19
CASC3-203ENST00000418132 RPLP2P05387 115 aaKnown RBP22.49■■□□□ 1.19
CASC3-203ENST00000418132 RFX1P22670 979 aa22.49■■□□□ 1.19
CASC3-203ENST00000418132 HOXA11P31270 313 aaPredicted RBP22.49■■□□□ 1.19
CASC3-203ENST00000418132 POU5F1Q01860 360 aaKnown RBP22.49■■□□□ 1.19
CASC3-203ENST00000418132 ITGA7Q13683 1181 aa22.49■■□□□ 1.19
CASC3-203ENST00000418132 ZACNQ401N2 412 aa22.49■■□□□ 1.19
CASC3-203ENST00000418132 SFMBT2Q5VUG0 894 aa22.49■■□□□ 1.19
CASC3-203ENST00000418132 PHLDB3Q6NSJ2 640 aa22.49■■□□□ 1.19
CASC3-203ENST00000418132 GJB7Q6PEY0 223 aa22.49■■□□□ 1.19
CASC3-203ENST00000418132 TOGARAM2Q6ZUX3 1019 aa22.49■■□□□ 1.19
CASC3-203ENST00000418132 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.49■■□□□ 1.19
CASC3-203ENST00000418132 TULP1O00294 542 aaPredicted RBP22.49■■□□□ 1.19
CASC3-203ENST00000418132 C4BPAP04003 597 aaKnown RBP22.49■■□□□ 1.19
CASC3-203ENST00000418132 JAM2P57087 298 aa22.49■■□□□ 1.19
CASC3-203ENST00000418132 C1QTNF8P60827 252 aa22.49■■□□□ 1.19
CASC3-203ENST00000418132 PTPN11Q06124 597 aaPredicted RBP22.49■■□□□ 1.19
CASC3-203ENST00000418132 NCBP1Q09161 790 aaKnown RBP22.49■■□□□ 1.19
CASC3-203ENST00000418132 SURF1Q15526 300 aa22.49■■□□□ 1.19
CASC3-203ENST00000418132 ENOX2Q16206 610 aaKnown RBP22.49■■□□□ 1.19
CASC3-203ENST00000418132 RSPH3Q86UC2 560 aa22.49■■□□□ 1.19
CASC3-203ENST00000418132 TAS1R2Q8TE23 839 aa22.49■■□□□ 1.19
CASC3-203ENST00000418132 SEMA4DQ92854 862 aa22.49■■□□□ 1.19
CASC3-203ENST00000418132 SPAG5Q96R06 1193 aa22.49■■□□□ 1.19
CASC3-203ENST00000418132 CELF4Q9BZC1 486 aaKnown RBP22.49■■□□□ 1.19
CASC3-203ENST00000418132 RAB20Q9NX57 234 aa22.49■■□□□ 1.19
CASC3-203ENST00000418132 UQCRHLA0A096LP55 91 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms