RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 TELO2Q9Y4R8 837 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 SLX4Q8IY92 1834 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 SPEF2Q9C093 1822 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 IRS2Q9Y4H2 1338 aa7.01□□□□□ -1.29
NIFKP3-201ENST00000417799 MED23Q9ULK4 1368 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 PDGFRBP09619 1106 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 GSPT1P15170 499 aaKnown RBP7□□□□□ -1.29
NIFKP3-201ENST00000417799 HIBADHP31937 336 aaKnown RBP7□□□□□ -1.29
NIFKP3-201ENST00000417799 GYG1P46976 350 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 MAPKAPK2P49137 400 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 PRR5P85299 388 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 BMP2KLQ5H9B9 411 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 BTBD8Q5XKL5 378 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 ZNF804AQ7Z570 1209 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 NECAB2Q7Z6G3 386 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 NBPF11Q86T75 865 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 IRF2BP1Q8IU81 584 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 EFHBQ8N7U6 833 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 SUPT20HQ8NEM7 779 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 CLEC4DQ8WXI8 215 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 TSPAN17Q96FV3 270 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 PSMD1Q99460 953 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 EYA3Q99504 573 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 BOLA2Q9H3K6 86 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 B3GALT1Q9Y5Z6 326 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 HCFC2Q9Y5Z7 792 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 KIAA1551Q9HCM1 1747 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 DLEC1Q9Y238 1755 aa7□□□□□ -1.29
NIFKP3-201ENST00000417799 LRRC37AA6NMS7 1700 aa6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 ABLIM1O14639 778 aa6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 DVL2O14641 736 aa6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 MAP4K4O95819 1239 aaPredicted RBP6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 PTPN1P18031 435 aaKnown RBP6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 SLC9A1P19634 815 aa6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 GJA4P35212 333 aa6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 MCAMP43121 646 aa6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 KIF11P52732 1056 aa6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 PLEKHN1Q494U1 663 aaPredicted RBP6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 BRDTQ58F21 947 aaPredicted RBP6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 ZC3H14Q6PJT7 736 aaKnown RBP6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 PASD1Q8IV76 773 aa6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 KIAA1958Q8N8K9 716 aa6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 SPATA5Q8NB90 893 aa6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 ARRDC4Q8NCT1 418 aa6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 DLG3Q92796 817 aa6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 SCYL1Q96KG9 808 aa6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 PCIF1Q9H4Z3 704 aa6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 KCNH7Q9NS40 1196 aa6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 RIC8BQ9NVN3 520 aa6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 HMG20BQ9P0W2 317 aa6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 SPO11Q9Y5K1 396 aa6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 SNED1Q8TER0 1413 aa6.99□□□□□ -1.29
NIFKP3-201ENST00000417799 FAM90A27PA6NNH2 459 aa6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 BUB1BO60566 1050 aaPredicted RBP6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 ULK1O75385 1050 aa6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 FRAT2O75474 233 aaPredicted RBP6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 IL1R1P14778 569 aa6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 EXOSC10Q01780 885 aaKnown RBP6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 GRIN1Q05586 938 aa6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 KIAA2012Q0VF49 1180 aa6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 TMEM132BQ14DG7 1078 aa6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 SEC23AQ15436 765 aa6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 PLEKHG6Q3KR16 790 aa6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 IQSEC1Q6DN90 963 aa6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 CC2D1AQ6P1N0 951 aaPredicted RBP6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 CNTROBQ8N137 903 aa6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 TDRD7Q8NHU6 1098 aaKnown RBP6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 RILPL2Q969X0 211 aa6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 EVI5LQ96CN4 794 aa6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 CEP89Q96ST8 783 aa6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 ELF4Q99607 663 aaPredicted RBP6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 COA1Q9GZY4 146 aa6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 VPS33BQ9H267 617 aa6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 CD209Q9NNX6 404 aa6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 ACSS2Q9NR19 701 aa6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 PAG1Q9NWQ8 432 aa6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 DENND2AQ9ULE3 1009 aa6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 LTBP1Q14766 1721 aa6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 PDS5AQ29RF7 1337 aaKnown RBP6.98□□□□□ -1.29
NIFKP3-201ENST00000417799 A0A1B0GUL6 1792 aa6.97□□□□□ -1.29
NIFKP3-201ENST00000417799 GOLIM4O00461 696 aa6.97□□□□□ -1.29
NIFKP3-201ENST00000417799 PPIP5K2O43314 1243 aa6.97□□□□□ -1.29
NIFKP3-201ENST00000417799 TGM5O43548 720 aa6.97□□□□□ -1.29
NIFKP3-201ENST00000417799 KATNA1O75449 491 aa6.97□□□□□ -1.29
NIFKP3-201ENST00000417799 PAPLNO95428 1278 aa6.97□□□□□ -1.29
NIFKP3-201ENST00000417799 YBX1P67809 324 aaKnown RBP6.97□□□□□ -1.29
NIFKP3-201ENST00000417799 TTF1Q15361 905 aaPredicted RBP6.97□□□□□ -1.29
NIFKP3-201ENST00000417799 TICAM2Q86XR7 235 aa6.97□□□□□ -1.29
NIFKP3-201ENST00000417799 COG1Q8WTW3 980 aa6.97□□□□□ -1.29
NIFKP3-201ENST00000417799 ARAP2Q8WZ64 1704 aa6.97□□□□□ -1.29
NIFKP3-201ENST00000417799 SLC5A5Q92911 643 aa6.97□□□□□ -1.29
NIFKP3-201ENST00000417799 EDC3Q96F86 508 aaKnown RBP6.97□□□□□ -1.29
NIFKP3-201ENST00000417799 PUS7LQ9H0K6 701 aaKnown RBP6.97□□□□□ -1.29
NIFKP3-201ENST00000417799 TAOK3Q9H2K8 898 aa6.97□□□□□ -1.29
NIFKP3-201ENST00000417799 BCAS3Q9H6U6 928 aa6.97□□□□□ -1.29
NIFKP3-201ENST00000417799 DUOX1Q9NRD9 1551 aa6.97□□□□□ -1.29
NIFKP3-201ENST00000417799 ZNF277Q9NRM2 450 aaPredicted RBP6.97□□□□□ -1.29
NIFKP3-201ENST00000417799 TOMM22Q9NS69 142 aa6.97□□□□□ -1.29
NIFKP3-201ENST00000417799 CACNA1SQ13698 1873 aa6.96□□□□□ -1.29
NIFKP3-201ENST00000417799 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms