RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 EHHADHQ08426 723 aa25.24■■□□□ 1.63
SMARCB1-205ENST00000417137 KCNT2Q6UVM3 1135 aa25.24■■□□□ 1.63
SMARCB1-205ENST00000417137 MYLIPQ8WY64 445 aa25.24■■□□□ 1.63
SMARCB1-205ENST00000417137 ZFP42Q96MM3 310 aa25.24■■□□□ 1.63
SMARCB1-205ENST00000417137 GBP4Q96PP9 640 aa25.24■■□□□ 1.63
SMARCB1-205ENST00000417137 LAMA2P24043 3122 aaKnown RBP25.23■■□□□ 1.63
SMARCB1-205ENST00000417137 EPOPA6NHQ4 379 aa25.23■■□□□ 1.63
SMARCB1-205ENST00000417137 RFXAPO00287 272 aa25.23■■□□□ 1.63
SMARCB1-205ENST00000417137 KINO60870 393 aaKnown RBP25.23■■□□□ 1.63
SMARCB1-205ENST00000417137 GADD45BO75293 160 aaPredicted RBP25.23■■□□□ 1.63
SMARCB1-205ENST00000417137 PRPF40AO75400 957 aaKnown RBP25.23■■□□□ 1.63
SMARCB1-205ENST00000417137 NR1I2O75469 434 aa25.23■■□□□ 1.63
SMARCB1-205ENST00000417137 PRPF6O94906 941 aaKnown RBP25.23■■□□□ 1.63
SMARCB1-205ENST00000417137 RPN1P04843 607 aaKnown RBP25.23■■□□□ 1.63
SMARCB1-205ENST00000417137 PPM1AP35813 382 aa25.23■■□□□ 1.63
SMARCB1-205ENST00000417137 OSTNP61366 133 aa25.23■■□□□ 1.63
SMARCB1-205ENST00000417137 PTPROQ16827 1216 aa25.23■■□□□ 1.63
SMARCB1-205ENST00000417137 KMT5BQ4FZB7 885 aa25.23■■□□□ 1.63
SMARCB1-205ENST00000417137 HPS3Q969F9 1004 aa25.23■■□□□ 1.63
SMARCB1-205ENST00000417137 GBP3Q9H0R5 595 aa25.23■■□□□ 1.63
SMARCB1-205ENST00000417137 NRDE2Q9H7Z3 1164 aa25.23■■□□□ 1.63
SMARCB1-205ENST00000417137 LMCD1Q9NZU5 365 aa25.23■■□□□ 1.63
SMARCB1-205ENST00000417137 A0A0B4J269 797 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 KLRC4O43908 158 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 ZC3H11AO75152 810 aaKnown RBP eCLIP25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 ALDH2P05091 517 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 CLTAP09496 248 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 FOSL2P15408 326 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 IGFBP4P22692 258 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 SCNN1GP51170 649 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 AFF1P51825 1210 aaKnown RBP25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 BCAR1P56945 870 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 DPYDQ12882 1025 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 GRIK3Q13003 919 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 KLHL23Q8NBE8 558 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 ZNF507Q8TCN5 953 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 GDPD5Q8WTR4 605 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 TMEM175Q9BSA9 504 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 MSTO1Q9BUK6 570 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 FGFBP2Q9BYJ0 223 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 SLC39A2Q9NP94 309 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 MIOSQ9NXC5 875 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 SPG21Q9NZD8 308 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 HCSTQ9UBK5 93 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 STYXL1Q9Y6J8 313 aa25.22■■□□□ 1.63
SMARCB1-205ENST00000417137 UBE4BO95155 1302 aa25.21■■□□□ 1.63
SMARCB1-205ENST00000417137 ANKRD63C9JTQ0 380 aa25.21■■□□□ 1.63
SMARCB1-205ENST00000417137 OGTO15294 1046 aa25.21■■□□□ 1.63
SMARCB1-205ENST00000417137 THP07101 528 aa25.21■■□□□ 1.63
SMARCB1-205ENST00000417137 KRT17Q04695 432 aa25.21■■□□□ 1.63
SMARCB1-205ENST00000417137 KCNA1Q09470 495 aa25.21■■□□□ 1.63
SMARCB1-205ENST00000417137 EPM2AIP1Q7L775 607 aaPredicted RBP25.21■■□□□ 1.63
SMARCB1-205ENST00000417137 ZNF280BQ86YH2 543 aa25.21■■□□□ 1.63
SMARCB1-205ENST00000417137 ELOA2Q8IYF1 753 aaPredicted RBP25.21■■□□□ 1.63
SMARCB1-205ENST00000417137 CEP120Q8N960 986 aa25.21■■□□□ 1.63
SMARCB1-205ENST00000417137 POMGNT1Q8WZA1 660 aa25.21■■□□□ 1.63
SMARCB1-205ENST00000417137 LMAN2LQ9H0V9 348 aa25.21■■□□□ 1.63
SMARCB1-205ENST00000417137 PUF60Q9UHX1 559 aaKnown RBP25.21■■□□□ 1.63
SMARCB1-205ENST00000417137 PLAGL2Q9UPG8 496 aa25.21■■□□□ 1.63
SMARCB1-205ENST00000417137 FNDC1Q4ZHG4 1894 aaPredicted RBP25.2■■□□□ 1.62
SMARCB1-205ENST00000417137 DDHD2O94830 711 aa25.2■■□□□ 1.62
SMARCB1-205ENST00000417137 PRR29P0C7W0 189 aa25.2■■□□□ 1.62
SMARCB1-205ENST00000417137 POU3F3P20264 500 aaPredicted RBP25.2■■□□□ 1.62
SMARCB1-205ENST00000417137 SLC39A4Q6P5W5 647 aa25.2■■□□□ 1.62
SMARCB1-205ENST00000417137 GSTCDQ8NEC7 633 aa25.2■■□□□ 1.62
SMARCB1-205ENST00000417137 PLEKHA5Q9HAU0 1116 aa25.2■■□□□ 1.62
SMARCB1-205ENST00000417137 AGO2Q9UKV8 859 aaKnown RBP25.2■■□□□ 1.62
SMARCB1-205ENST00000417137 FAN1Q9Y2M0 1017 aa25.2■■□□□ 1.62
SMARCB1-205ENST00000417137 LPXNO60711 386 aa25.19■■□□□ 1.62
SMARCB1-205ENST00000417137 FGF18O76093 207 aa25.19■■□□□ 1.62
SMARCB1-205ENST00000417137 SMC2O95347 1197 aa25.19■■□□□ 1.62
SMARCB1-205ENST00000417137 GALTP07902 379 aa25.19■■□□□ 1.62
SMARCB1-205ENST00000417137 PLCB3Q01970 1234 aa25.19■■□□□ 1.62
SMARCB1-205ENST00000417137 UBE3AQ05086 875 aa25.19■■□□□ 1.62
SMARCB1-205ENST00000417137 ADGRE1Q14246 886 aa25.19■■□□□ 1.62
SMARCB1-205ENST00000417137 KCNB1Q14721 858 aa25.19■■□□□ 1.62
SMARCB1-205ENST00000417137 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.19■■□□□ 1.62
SMARCB1-205ENST00000417137 HAPLN2Q9GZV7 340 aa25.19■■□□□ 1.62
SMARCB1-205ENST00000417137 RHOBTB3O94955 611 aa25.18■■□□□ 1.62
SMARCB1-205ENST00000417137 KIF20AO95235 890 aa25.18■■□□□ 1.62
SMARCB1-205ENST00000417137 LDHAP00338 332 aaKnown RBP25.18■■□□□ 1.62
SMARCB1-205ENST00000417137 ITGB1P05556 798 aa25.18■■□□□ 1.62
SMARCB1-205ENST00000417137 GARTP22102 1010 aa25.18■■□□□ 1.62
SMARCB1-205ENST00000417137 SNRPFP62306 86 aaKnown RBP25.18■■□□□ 1.62
SMARCB1-205ENST00000417137 DSC1Q08554 894 aa25.18■■□□□ 1.62
SMARCB1-205ENST00000417137 ALKAL1Q6UXT8 129 aa25.18■■□□□ 1.62
SMARCB1-205ENST00000417137 COLGALT2Q8IYK4 626 aa25.18■■□□□ 1.62
SMARCB1-205ENST00000417137 SLC39A11Q8N1S5 342 aa25.18■■□□□ 1.62
SMARCB1-205ENST00000417137 GLIS3Q8NEA6 775 aa25.18■■□□□ 1.62
SMARCB1-205ENST00000417137 SPPL3Q8TCT6 385 aa25.18■■□□□ 1.62
SMARCB1-205ENST00000417137 RPF1Q9H9Y2 349 aaKnown RBP25.18■■□□□ 1.62
SMARCB1-205ENST00000417137 ALG13Q9NP73 1137 aaKnown RBP25.18■■□□□ 1.62
SMARCB1-205ENST00000417137 RMND1Q9NWS8 449 aa25.18■■□□□ 1.62
SMARCB1-205ENST00000417137 DNAJB4Q9UDY4 337 aa25.18■■□□□ 1.62
SMARCB1-205ENST00000417137 LZTS1Q9Y250 596 aa25.18■■□□□ 1.62
SMARCB1-205ENST00000417137 GOLGA6L22H0YM25 854 aa25.17■■□□□ 1.62
SMARCB1-205ENST00000417137 PTGESO14684 152 aa25.17■■□□□ 1.62
SMARCB1-205ENST00000417137 KIAA0391O15091 583 aaKnown RBP25.17■■□□□ 1.62
SMARCB1-205ENST00000417137 POU5F1Q01860 360 aaKnown RBP25.17■■□□□ 1.62
SMARCB1-205ENST00000417137 STK4Q13043 487 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms