RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 UBXN1Q04323 297 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 ENPEPQ07075 957 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 CYP24A1Q07973 514 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 FAAP100Q0VG06 881 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 CETN1Q12798 172 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 LRRC26Q2I0M4 334 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 IRF2BP1Q8IU81 584 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 BRSK2Q8IWQ3 736 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 TRIM59Q8IWR1 403 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 TMC2Q8TDI7 906 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 APBB2Q92870 758 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 CCDC127Q96BQ5 260 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 FBXL18Q96ME1 805 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 ACAP3Q96P50 834 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 HTATIP2Q9BUP3 242 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 APOL6Q9BWW8 343 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 FTHL17Q9BXU8 183 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 IFIH1Q9BYX4 1025 aaKnown RBP9.13□□□□□ -0.95
RBM39-208ENST00000416108 XPO4Q9C0E2 1151 aaKnown RBP9.13□□□□□ -0.95
RBM39-208ENST00000416108 NDST4Q9H3R1 872 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 MMRN2Q9H8L6 949 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 AGO3Q9H9G7 860 aaKnown RBP9.13□□□□□ -0.95
RBM39-208ENST00000416108 PTPRHQ9HD43 1115 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 TOPORSQ9NS56 1045 aaPredicted RBP9.13□□□□□ -0.95
RBM39-208ENST00000416108 PADI3Q9ULW8 664 aa9.13□□□□□ -0.95
RBM39-208ENST00000416108 LTBP2Q14767 1821 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 A0A1B0GTH6 734 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 ABLIM1O14639 778 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 IL18RAPO95256 599 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 ADRB2P07550 413 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 TPM1P09493 284 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 STAG3L1P0CL83 205 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 DLATP10515 647 aaKnown RBP9.12□□□□□ -0.95
RBM39-208ENST00000416108 ITGA4P13612 1032 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 RAG1P15918 1043 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 TNNI1P19237 187 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 IBSPP21815 317 aaPredicted RBP9.12□□□□□ -0.95
RBM39-208ENST00000416108 RFC2P35250 354 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 TNFSF9P41273 254 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 CCL23P55773 120 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 MYL7Q01449 175 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 POU5F1Q01860 360 aaKnown RBP9.12□□□□□ -0.95
RBM39-208ENST00000416108 KCNH2Q12809 1159 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 PSMD6Q15008 389 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 SEZ6Q53EL9 994 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.12□□□□□ -0.95
RBM39-208ENST00000416108 CD302Q8IX05 232 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 PGBD4Q96DM1 585 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 MRFAP1L1Q96HT8 127 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 MFSD14AQ96MC6 490 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 CGRRF1Q99675 332 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 HAPLN2Q9GZV7 340 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 C1orf112Q9NSG2 853 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 FAM105AQ9NUU6 356 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 RNF216Q9NWF9 866 aaPredicted RBP9.12□□□□□ -0.95
RBM39-208ENST00000416108 PARP2Q9UGN5 583 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 CPSF3Q9UKF6 684 aaKnown RBP9.12□□□□□ -0.95
RBM39-208ENST00000416108 TBX21Q9UL17 535 aa9.12□□□□□ -0.95
RBM39-208ENST00000416108 R3HCC1Q9Y3T6 440 aaKnown RBP9.12□□□□□ -0.95
RBM39-208ENST00000416108 FNDC1Q4ZHG4 1894 aaPredicted RBP9.11□□□□□ -0.95
RBM39-208ENST00000416108 TTC3P53804 2025 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 LRRC10BA6NIK2 292 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 XPOTO43592 962 aaKnown RBP9.11□□□□□ -0.95
RBM39-208ENST00000416108 PHACTR2O75167 634 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 TNNC2P02585 160 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 PTMAP06454 111 aaKnown RBP9.11□□□□□ -0.95
RBM39-208ENST00000416108 TMEM191BP0C7N4 346 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 TRIM49P0CI25 452 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 TRIM49CP0CI26 452 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 CXCL8P10145 99 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 CDC25BP30305 580 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 HOXA11P31270 313 aaPredicted RBP9.11□□□□□ -0.95
RBM39-208ENST00000416108 CYP2C18P33260 490 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 MXI1P50539 228 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 AP3M2P53677 418 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 CCDC173Q0VFZ6 552 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 BIRC3Q13489 604 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 ZBTB41Q5SVQ8 909 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 GBP6Q6ZN66 633 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 WDR49Q8IV35 697 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 TMEM199Q8N511 208 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 CEP120Q8N960 986 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 CCDC150Q8NCX0 1101 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 ZSWIM2Q8NEG5 633 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 PARD3BQ8TEW8 1205 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 CACTINQ8WUQ7 758 aaKnown RBP9.11□□□□□ -0.95
RBM39-208ENST00000416108 SLC35C1Q96A29 364 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 ABHD8Q96I13 439 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 SCLYQ96I15 445 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 ANKRD36BP1Q96IX9 119 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 RPS6KC1Q96S38 1066 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 ADAM2Q99965 735 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 EIF2AQ9BY44 585 aaKnown RBP9.11□□□□□ -0.95
RBM39-208ENST00000416108 PLEKHA5Q9HAU0 1116 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 PDE11AQ9HCR9 933 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 RTN4Q9NQC3 1192 aaKnown RBP9.11□□□□□ -0.95
RBM39-208ENST00000416108 SNTG2Q9NY99 539 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 IPPQ9Y573 584 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 PCDHB2Q9Y5E7 798 aa9.11□□□□□ -0.95
RBM39-208ENST00000416108 UMODL1Q5DID0 1318 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms