RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 SPIRE2Q8WWL2 714 aa10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 C11orf84Q9BUA3 381 aaPredicted RBP10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 VPS16Q9H269 839 aa10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 AGO3Q9H9G7 860 aaKnown RBP10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 SUCLA2Q9P2R7 463 aaPredicted RBP10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 NOC2LQ9Y3T9 749 aaKnown RBP10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 PCDHB13Q9Y5F0 798 aa10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 COL4A4P53420 1690 aaPredicted RBP10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 COL4A6Q14031 1691 aa10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 TTC3P53804 2025 aa10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 LAMA2P24043 3122 aaKnown RBP10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 IGKV6-21A0A0C4DH24 114 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 PDXKO00764 312 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 CLIC2O15247 247 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 ASAP2O43150 1006 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 CBFA2T2O43439 604 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 SKIP12755 728 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 POU3F3P20264 500 aaPredicted RBP10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 NR2F2P24468 414 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 EEF1GP26641 437 aaKnown RBP10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 GTF2BQ00403 316 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 FKBP3Q00688 224 aaKnown RBP10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 SPAG1Q07617 926 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 DMP1Q13316 513 aaPredicted RBP10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 ARID5BQ14865 1188 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 EDRF1Q3B7T1 1238 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 TAS1R3Q7RTX0 852 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 RHPN2Q8IUC4 686 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 TMEM192Q8IY95 271 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 CMTR2Q8IYT2 770 aaKnown RBP10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 GDPD5Q8WTR4 605 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 ATXN2LQ8WWM7 1075 aaKnown RBP10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 PSPC1Q8WXF1 523 aaKnown RBP10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 PPP2R3CQ969Q6 453 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 ADAM2Q99965 735 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 NTPCRQ9BSD7 190 aaKnown RBP10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 ST6GALNAC4Q9H4F1 302 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 ERVK-5Q9HDB9 667 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 KMT5AQ9NQR1 393 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 RGS18Q9NS28 235 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 TYW1Q9NV66 732 aaKnown RBP10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 COG5Q9UP83 839 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 MTCH2Q9Y6C9 303 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 UBE4BO95155 1302 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 RFXAPO00287 272 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 GPR32O75388 356 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 NR3C1P04150 777 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 GPC3P51654 580 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 GPM6BQ13491 265 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 TFDP1Q14186 410 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 ADGRE1Q14246 886 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 EPC2Q52LR7 807 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 TIGD5Q53EQ6 642 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 MIIPQ5JXC2 388 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 PPP4R3CPQ6ZMV5 832 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 TMC6Q7Z403 805 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 FILIP1Q7Z7B0 1213 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 VSTM4Q8IW00 320 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 PRPF31Q8WWY3 499 aaKnown RBP10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 TUBGCP2Q9BSJ2 902 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 C17orf80Q9BSJ5 609 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 C17orf75Q9HAS0 396 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 AGPAT3Q9NRZ7 376 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 ARHGAP28Q9P2N2 729 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 MAGEC2Q9UBF1 373 aaPredicted RBP10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 TBX20Q9UMR3 447 aa10.06□□□□□ -0.8
CHRNA1-206ENST00000416004 DLL1O00548 723 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 N4BP3O15049 544 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 CALUO43852 315 aaPredicted RBP10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 DGKIO75912 1065 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 AKAP3O75969 853 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 PTMAP06454 111 aaKnown RBP10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 DARSP14868 501 aaKnown RBP10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 PBX1P40424 430 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 MTIF2P46199 727 aaKnown RBP10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 CASP4P49662 377 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 SMTNP53814 917 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 MRPS5P82675 430 aaKnown RBP10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 SLC20A2Q08357 652 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 ADAM9Q13443 819 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 ALCAMQ13740 583 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 CAPSQ13938 189 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 MXD4Q14582 209 aaPredicted RBP10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 STXBP4Q6ZWJ1 553 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 CCDC186Q7Z3E2 898 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 FAM228AQ86W67 206 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 FAM114A1Q8IWE2 563 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 RSPH1Q8WYR4 309 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 NLRP4Q96MN2 994 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 CEP63Q96MT8 703 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 ZNF830Q96NB3 372 aaPredicted RBP10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 ACCSQ96QU6 501 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 PLVAPQ9BX97 442 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 GBP3Q9H0R5 595 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 LMAN2LQ9H0V9 348 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 ELAC1Q9H777 363 aaKnown RBP10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 CHST12Q9NRB3 414 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 TMEM51Q9NW97 253 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 TMEM161AQ9NX61 479 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 USP20Q9Y2K6 914 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms