RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 MARK3P27448 753 aa13.68□□□□□ -0.22
SCN1B-202ENST00000415950 ATXN3P54252 364 aaPredicted RBP13.68□□□□□ -0.22
SCN1B-202ENST00000415950 CENPPQ6IPU0 288 aa13.68□□□□□ -0.22
SCN1B-202ENST00000415950 CCNYL1Q8N7R7 359 aa13.68□□□□□ -0.22
SCN1B-202ENST00000415950 NLRP4Q96MN2 994 aa13.68□□□□□ -0.22
SCN1B-202ENST00000415950 RBM15Q96T37 977 aaKnown RBP eCLIP13.68□□□□□ -0.22
SCN1B-202ENST00000415950 CENPKQ9BS16 269 aa13.68□□□□□ -0.22
SCN1B-202ENST00000415950 DRC3Q9H069 523 aa13.68□□□□□ -0.22
SCN1B-202ENST00000415950 LRRC4Q9HBW1 653 aa13.68□□□□□ -0.22
SCN1B-202ENST00000415950 APOBEC2Q9Y235 224 aaKnown RBP13.68□□□□□ -0.22
SCN1B-202ENST00000415950 ZNF335Q9H4Z2 1342 aaPredicted RBP13.68□□□□□ -0.22
SCN1B-202ENST00000415950 NRXN1Q9ULB1 1477 aa13.68□□□□□ -0.22
SCN1B-202ENST00000415950 FAM187AA6NFU0 413 aa13.68□□□□□ -0.22
SCN1B-202ENST00000415950 NVLO15381 856 aaKnown RBP13.68□□□□□ -0.22
SCN1B-202ENST00000415950 RAD17O75943 681 aa13.68□□□□□ -0.22
SCN1B-202ENST00000415950 CYFIP1Q7L576 1253 aa13.68□□□□□ -0.22
SCN1B-202ENST00000415950 HAUS8Q9BT25 410 aa13.68□□□□□ -0.22
SCN1B-202ENST00000415950 PI4K2AQ9BTU6 479 aa13.68□□□□□ -0.22
SCN1B-202ENST00000415950 PLA2G12BQ9BX93 195 aa13.68□□□□□ -0.22
SCN1B-202ENST00000415950 TMBIM4Q9HC24 238 aa13.68□□□□□ -0.22
SCN1B-202ENST00000415950 FMO5P49326 533 aa13.68□□□□□ -0.22
SCN1B-202ENST00000415950 ARL4CP56559 192 aa13.68□□□□□ -0.22
SCN1B-202ENST00000415950 AENQ8WTP8 325 aaKnown RBP13.68□□□□□ -0.22
SCN1B-202ENST00000415950 SHCBP1LQ9BZQ2 653 aa13.68□□□□□ -0.22
SCN1B-202ENST00000415950 RICTORQ6R327 1708 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 FOXN3O00409 490 aaPredicted RBP13.67□□□□□ -0.22
SCN1B-202ENST00000415950 DNAJC8O75937 253 aaPredicted RBP13.67□□□□□ -0.22
SCN1B-202ENST00000415950 YY1P25490 414 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 CNGA1P29973 690 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 ARFIP2P53365 341 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 TNFAIP1Q13829 316 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 PDIA5Q14554 519 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 SLC26A7Q8TE54 656 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 VCPKMTQ9H867 229 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 DLGAP2Q9P1A6 1054 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 MAD2L2Q9UI95 211 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 CSPG5O95196 566 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 KCNK18Q7Z418 384 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 RAB44Q7Z6P3 723 aaPredicted RBP13.67□□□□□ -0.22
SCN1B-202ENST00000415950 TMEM117Q9H0C3 514 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 UPF3AQ9H1J1 476 aaKnown RBP13.67□□□□□ -0.22
SCN1B-202ENST00000415950 TRABDQ9H4I3 376 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 KIF9Q9HAQ2 790 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 MTMR4Q9NYA4 1195 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 HAO1Q9UJM8 370 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 ABCB11O95342 1321 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 CFAP73A6NFT4 308 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 PIK3R2O00459 728 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 GSTA4O15217 222 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 TJP3O95049 919 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 RANBP1P43487 201 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 ARSEP51690 589 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 FRMD5Q7Z6J6 570 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 ELOA2Q8IYF1 753 aaPredicted RBP13.67□□□□□ -0.22
SCN1B-202ENST00000415950 SERPINI1Q99574 410 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 LXNQ9BS40 222 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 MSTO1Q9BUK6 570 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 PI4KBQ9UBF8 816 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 A0A1W2PQJ5 194 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 DENND3A2RUS2 1198 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 IPO5O00410 1097 aaKnown RBP13.67□□□□□ -0.22
SCN1B-202ENST00000415950 APBA3O96018 575 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 AGTP01019 485 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 GRAPQ13588 217 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 AADACL2Q6P093 401 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 GRAPLQ8TC17 118 aaPredicted RBP13.67□□□□□ -0.22
SCN1B-202ENST00000415950 PPP1R36Q96LQ0 422 aa13.67□□□□□ -0.22
SCN1B-202ENST00000415950 ZC3H13Q5T200 1668 aaKnown RBP13.66□□□□□ -0.22
SCN1B-202ENST00000415950 RNF103-CHMP3A0A140T963 221 aa13.66□□□□□ -0.22
SCN1B-202ENST00000415950 TCRBV5S4A2TA0A5A2 114 aa13.66□□□□□ -0.22
SCN1B-202ENST00000415950 LRRC10BA6NIK2 292 aa13.66□□□□□ -0.22
SCN1B-202ENST00000415950 ZNF34Q8IZ26 560 aa13.66□□□□□ -0.22
SCN1B-202ENST00000415950 PRCCQ92733 491 aaPredicted RBP13.66□□□□□ -0.22
SCN1B-202ENST00000415950 KCND1Q9NSA2 647 aa13.66□□□□□ -0.22
SCN1B-202ENST00000415950 ZNF711Q9Y462 761 aa13.66□□□□□ -0.22
SCN1B-202ENST00000415950 MYO3BQ8WXR4 1341 aa13.66□□□□□ -0.22
SCN1B-202ENST00000415950 BNIP3LO60238 219 aa13.66□□□□□ -0.22
SCN1B-202ENST00000415950 PDCD2Q16342 344 aaPredicted RBP13.66□□□□□ -0.22
SCN1B-202ENST00000415950 PABPC3Q9H361 631 aaKnown RBP13.66□□□□□ -0.22
SCN1B-202ENST00000415950 SNX25Q9H3E2 840 aa13.66□□□□□ -0.22
SCN1B-202ENST00000415950 METTL5Q9NRN9 209 aaKnown RBP13.66□□□□□ -0.22
SCN1B-202ENST00000415950 E2F8A0AVK6 867 aa13.66□□□□□ -0.22
SCN1B-202ENST00000415950 PDXKO00764 312 aa13.66□□□□□ -0.22
SCN1B-202ENST00000415950 AKAP3O75969 853 aa13.66□□□□□ -0.22
SCN1B-202ENST00000415950 DHX34Q14147 1143 aaKnown RBP13.66□□□□□ -0.22
SCN1B-202ENST00000415950 P3H1Q32P28 736 aa13.66□□□□□ -0.22
SCN1B-202ENST00000415950 CATSPER3Q86XQ3 398 aa13.66□□□□□ -0.22
SCN1B-202ENST00000415950 APEX2Q9UBZ4 518 aa13.66□□□□□ -0.22
SCN1B-202ENST00000415950 IPO11Q9UI26 975 aaKnown RBP13.66□□□□□ -0.22
SCN1B-202ENST00000415950 PXDNQ92626 1479 aa13.66□□□□□ -0.22
SCN1B-202ENST00000415950 CYP11B2P19099 503 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 PON1P27169 355 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 PSMC6P62333 389 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 ZNF844Q08AG5 666 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 ZBTB17Q13105 803 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 KIF19Q2TAC6 998 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 LRIG3Q6UXM1 1119 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 MED15Q96RN5 788 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 RPS6KC1Q96S38 1066 aa13.65□□□□□ -0.22
SCN1B-202ENST00000415950 CACYBPQ9HB71 228 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms