RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 CEP72Q9P209 647 aa15.47■□□□□ 0.07
HMGA1P1-201ENST00000415560 CPSF3Q9UKF6 684 aaKnown RBP15.47■□□□□ 0.07
HMGA1P1-201ENST00000415560 TTLL13PA6NNM8 815 aa15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 LRRIQ3A6PVS8 624 aaPredicted RBP15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 ARVCFO00192 962 aa15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 CLTAP09496 248 aa15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 IQCF3P0C7M6 154 aa15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 DLATP10515 647 aaKnown RBP15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 PON1P27169 355 aa15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 GCLMP48507 274 aa15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 CTCFP49711 727 aaPredicted RBP15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 FXR1P51114 621 aaKnown RBP eCLIP15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 DLG4P78352 724 aa15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 SLC27A1Q6PCB7 646 aa15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 FMNL3Q8IVF7 1028 aa15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 BRSK2Q8IWQ3 736 aa15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 CD302Q8IX05 232 aa15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 CPB2Q96IY4 423 aa15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 BAG1Q99933 345 aaPredicted RBP15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 CDT1Q9H211 546 aa15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 PDZD7Q9H5P4 517 aa15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 ABHD10Q9NUJ1 306 aa15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 FBXL5Q9UKA1 691 aa15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 OGDHLQ9ULD0 1010 aa15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 CDY2AQ9Y6F7 541 aa15.46■□□□□ 0.07
HMGA1P1-201ENST00000415560 GRIN2DO15399 1336 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 ABLIM1O14639 778 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 GPR182O15218 404 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 RPS6KA5O75582 802 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 HSPA8P11142 646 aaKnown RBP15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 CAPN2P17655 700 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 SLC9A1P19634 815 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 RFX1P22670 979 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 THPOP40225 353 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 KLK7P49862 253 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 CLDN10P78369 228 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 PPP3CAQ08209 521 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 ARID5BQ14865 1188 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 KLHDC7AQ5VTJ3 777 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 EEF1DP3Q658K8 133 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 TMTC1Q8IUR5 882 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 SLC43A3Q8NBI5 491 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 FAM212AQ96EL1 285 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 FAM81BQ96LP2 452 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 ACAP3Q96P50 834 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 CGRRF1Q99675 332 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 CCDC94Q9BW85 323 aaPredicted RBP15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 TRIM6Q9C030 488 aaPredicted RBP15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 TTYH3Q9C0H2 523 aa15.45■□□□□ 0.06
HMGA1P1-201ENST00000415560 PHACTR2O75167 634 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 TFRCP02786 760 aaKnown RBP15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 STAG3L1P0CL83 205 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 FGFR4P22455 802 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 YARSP54577 528 aaKnown RBP15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 POLR2FP61218 127 aaKnown RBP15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 MTFR1Q15390 333 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 CBWD6Q4V339 395 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 WDR44Q5JSH3 913 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 CBWD3Q5JTY5 395 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 CBWD5Q5RIA9 395 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 CYP26C1Q6V0L0 522 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 RRAGAQ7L523 313 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 WDR49Q8IV35 697 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 USP38Q8NB14 1042 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 FBXL13Q8NEE6 735 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 PLEKHO2Q8TD55 490 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 SPAG5Q96R06 1193 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 TMEM117Q9H0C3 514 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 INTS2Q9H0H0 1204 aaKnown RBP15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 KCNF1Q9H3M0 494 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 TMX1Q9H3N1 280 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 ASB7Q9H672 318 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 PDE11AQ9HCR9 933 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 CHST12Q9NRB3 414 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 AGPAT5Q9NUQ2 364 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 MYO6Q9UM54 1294 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 COQ4Q9Y3A0 265 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 SQORQ9Y6N5 450 aa15.44■□□□□ 0.06
HMGA1P1-201ENST00000415560 ESPNB1AK53 854 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 TLR3O15455 904 aaKnown RBP15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 ARHGAP6O43182 974 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 CCP110O43303 1012 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 ZC3H11AO75152 810 aaKnown RBP eCLIP15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 NPTXRO95502 500 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 MYCP01106 439 aaPredicted RBP15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 TNNC2P02585 160 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 CCDC172P0C7W6 258 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 ZSCAN20P17040 1043 aaPredicted RBP15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 TNFSF9P41273 254 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 GRM5P41594 1212 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 OSTNP61366 133 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 CCZ1BP86790 482 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 CCZ1P86791 482 aaPredicted RBP15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 GOLGA8FQ08AF8 430 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 GOLGA8DPQ0D2H9 430 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 LRMPQ12912 555 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 DUOXA2Q1HG44 320 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 EPC2Q52LR7 807 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 SEZ6Q53EL9 994 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 C1orf220Q5T0J3 134 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms