RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 SIPA1L3O60292 1781 aaPredicted RBP2.99□□□□□ -1.93
MCF2-204ENST00000414978 KIF24Q5T7B8 1368 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 A0A1W2PRQ8 180 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 C7orf72A4D263 438 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 SLC27A2O14975 620 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 SIGLEC6O43699 453 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 UBXN7O94888 489 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 EOMESO95936 686 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 HTR1BP28222 390 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 ETV3P41162 512 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 AGFG1P52594 562 aaKnown RBP2.99□□□□□ -1.93
MCF2-204ENST00000414978 CNN3Q15417 329 aaKnown RBP2.99□□□□□ -1.93
MCF2-204ENST00000414978 JAKMIP3Q5VZ66 844 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 C20orf204Q6ZNR8 217 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 CCDC129Q6ZRS4 1044 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 NLRP10Q86W26 655 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 DENND1CQ8IV53 801 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 CPOQ8IVL8 374 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 EFHBQ8N7U6 833 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 ZNF527Q8NB42 609 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 PPM1MQ96MI6 270 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 TUBGCP5Q96RT8 1024 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 CGRRF1Q99675 332 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 BARD1Q99728 777 aaKnown RBP2.99□□□□□ -1.93
MCF2-204ENST00000414978 TMPRSS13Q9BYE2 586 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 SEMA6BQ9H3T3 888 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 AGO4Q9HCK5 861 aaKnown RBP2.99□□□□□ -1.93
MCF2-204ENST00000414978 TOR1BO14657 336 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 ERC2O15083 957 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 GSTA4O15217 222 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 INMTO95050 263 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 POU2F2P09086 479 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 IFIT1P09914 478 aaKnown RBP2.99□□□□□ -1.93
MCF2-204ENST00000414978 BRAFP15056 766 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 PTMSP20962 102 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 CTSSP25774 331 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 CD96P40200 585 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 IFIT5Q13325 482 aaKnown RBP2.99□□□□□ -1.93
MCF2-204ENST00000414978 PMS2P11Q13670 270 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 STARD3Q14849 445 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 NOMO1Q15155 1222 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 TAF12Q16514 161 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 PITRM1Q5JRX3 1037 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 LIN54Q6MZP7 749 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 ZNF765Q7L2R6 523 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 MFSD2AQ8NA29 543 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 NPLOC4Q8TAT6 608 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 KCNG4Q8TDN1 519 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 TTC9Q92623 222 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 UTP4Q969X6 686 aaKnown RBP2.99□□□□□ -1.93
MCF2-204ENST00000414978 FERMT2Q96AC1 680 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 TBC1D32Q96NH3 1257 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 ASB2Q96Q27 587 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 PRAM1Q96QH2 718 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 LDAHQ9H6V9 325 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 GPATCH2Q9NW75 528 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 FBXO10Q9UK96 956 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 DSEQ9UL01 958 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 ACEP12821 1306 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 LRRC37AA6NMS7 1700 aa2.99□□□□□ -1.93
MCF2-204ENST00000414978 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.98□□□□□ -1.93
MCF2-204ENST00000414978 C1QTNF9BB2RNN3 333 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 TUSC2O75896 110 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 AMY2AP04746 511 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 IL2RBP14784 551 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 AMY2BP19961 511 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 EDNRBP24530 442 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 PDIA3P30101 505 aaKnown RBP2.98□□□□□ -1.93
MCF2-204ENST00000414978 ADSLP30566 484 aaPredicted RBP2.98□□□□□ -1.93
MCF2-204ENST00000414978 PPM1AP35813 382 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 CAP2P40123 477 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 PUM3Q15397 648 aaKnown RBP2.98□□□□□ -1.93
MCF2-204ENST00000414978 SURF1Q15526 300 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 UGT8Q16880 541 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.98□□□□□ -1.93
MCF2-204ENST00000414978 DGKKQ5KSL6 1271 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 SFRP5Q5T4F7 317 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 RNF220Q5VTB9 566 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 DARS2Q6PI48 645 aaKnown RBP2.98□□□□□ -1.93
MCF2-204ENST00000414978 MMS22LQ6ZRQ5 1243 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 MAP4K3Q8IVH8 894 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 RUBCNQ92622 972 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 MUL1Q969V5 352 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 ACDQ96AP0 544 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 MVB12AQ96EY5 273 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 SYT3Q9BQG1 590 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 DUSP23Q9BVJ7 150 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 AGXT2Q9BYV1 514 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 KCTD10Q9H3F6 313 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 SOX17Q9H6I2 414 aaPredicted RBP2.98□□□□□ -1.93
MCF2-204ENST00000414978 C1orf112Q9NSG2 853 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 SACM1LQ9NTJ5 587 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 CPNE7Q9UBL6 633 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 GRHPRQ9UBQ7 328 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 NSFL1CQ9UNZ2 370 aaKnown RBP2.98□□□□□ -1.93
MCF2-204ENST00000414978 NUB1Q9Y5A7 615 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 GPR45Q9Y5Y3 372 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 U3KQE9 123 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 AQP12BA6NM10 295 aa2.98□□□□□ -1.93
MCF2-204ENST00000414978 EIF3FO00303 357 aaPredicted RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms