RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 NFX1Q12986 1120 aaKnown RBP15.5■□□□□ 0.07
SF3B1-204ENST00000414963 FILIP1LQ4L180 1135 aa15.5■□□□□ 0.07
SF3B1-204ENST00000414963 PLEKHG4Q58EX7 1191 aa15.5■□□□□ 0.07
SF3B1-204ENST00000414963 COL13A1Q5TAT6 717 aaPredicted RBP15.5■□□□□ 0.07
SF3B1-204ENST00000414963 USP37Q86T82 979 aa15.5■□□□□ 0.07
SF3B1-204ENST00000414963 BRSK2Q8IWQ3 736 aa15.5■□□□□ 0.07
SF3B1-204ENST00000414963 PARD3BQ8TEW8 1205 aa15.5■□□□□ 0.07
SF3B1-204ENST00000414963 SLC35C1Q96A29 364 aa15.5■□□□□ 0.07
SF3B1-204ENST00000414963 MRFAP1L1Q96HT8 127 aa15.5■□□□□ 0.07
SF3B1-204ENST00000414963 EIF2AQ9BY44 585 aaKnown RBP15.5■□□□□ 0.07
SF3B1-204ENST00000414963 WNT8AQ9H1J5 351 aa15.5■□□□□ 0.07
SF3B1-204ENST00000414963 NDST4Q9H3R1 872 aa15.5■□□□□ 0.07
SF3B1-204ENST00000414963 TAB2Q9NYJ8 693 aa15.5■□□□□ 0.07
SF3B1-204ENST00000414963 RBAKQ9NYW8 714 aaPredicted RBP15.5■□□□□ 0.07
SF3B1-204ENST00000414963 IFNKQ9P0W0 207 aa15.5■□□□□ 0.07
SF3B1-204ENST00000414963 UMODL1Q5DID0 1318 aa15.49■□□□□ 0.07
SF3B1-204ENST00000414963 PMM2O15305 246 aa15.49■□□□□ 0.07
SF3B1-204ENST00000414963 ZNF623O75123 536 aa15.49■□□□□ 0.07
SF3B1-204ENST00000414963 NPTXRO95502 500 aa15.49■□□□□ 0.07
SF3B1-204ENST00000414963 TIMP1P01033 207 aa15.49■□□□□ 0.07
SF3B1-204ENST00000414963 HARSP12081 509 aaKnown RBP15.49■□□□□ 0.07
SF3B1-204ENST00000414963 GTF2H1P32780 548 aa15.49■□□□□ 0.07
SF3B1-204ENST00000414963 TNFSF9P41273 254 aa15.49■□□□□ 0.07
SF3B1-204ENST00000414963 SURF1Q15526 300 aa15.49■□□□□ 0.07
SF3B1-204ENST00000414963 ENOX2Q16206 610 aaKnown RBP15.49■□□□□ 0.07
SF3B1-204ENST00000414963 C1orf220Q5T0J3 134 aa15.49■□□□□ 0.07
SF3B1-204ENST00000414963 MRPL10Q7Z7H8 261 aaKnown RBP15.49■□□□□ 0.07
SF3B1-204ENST00000414963 CREBRFQ8IUR6 639 aa15.49■□□□□ 0.07
SF3B1-204ENST00000414963 THNSL1Q8IYQ7 743 aa15.49■□□□□ 0.07
SF3B1-204ENST00000414963 PLEKHO2Q8TD55 490 aa15.49■□□□□ 0.07
SF3B1-204ENST00000414963 ABHD8Q96I13 439 aa15.49■□□□□ 0.07
SF3B1-204ENST00000414963 FTHL17Q9BXU8 183 aa15.49■□□□□ 0.07
SF3B1-204ENST00000414963 IFIH1Q9BYX4 1025 aaKnown RBP15.49■□□□□ 0.07
SF3B1-204ENST00000414963 TRIM5Q9C035 493 aa15.49■□□□□ 0.07
SF3B1-204ENST00000414963 XPO4Q9C0E2 1151 aaKnown RBP15.49■□□□□ 0.07
SF3B1-204ENST00000414963 VPS16Q9H269 839 aa15.49■□□□□ 0.07
SF3B1-204ENST00000414963 PLEKHA5Q9HAU0 1116 aa15.49■□□□□ 0.07
SF3B1-204ENST00000414963 INTS13Q9NVM9 706 aa15.49■□□□□ 0.07
SF3B1-204ENST00000414963 TRIM43BA6NCK2 446 aa15.48■□□□□ 0.07
SF3B1-204ENST00000414963 STX10O60499 249 aa15.48■□□□□ 0.07
SF3B1-204ENST00000414963 IL18RAPO95256 599 aa15.48■□□□□ 0.07
SF3B1-204ENST00000414963 ADCY5O95622 1261 aa15.48■□□□□ 0.07
SF3B1-204ENST00000414963 TPM3P06753 285 aa15.48■□□□□ 0.07
SF3B1-204ENST00000414963 SKIP12755 728 aa15.48■□□□□ 0.07
SF3B1-204ENST00000414963 CYP2C18P33260 490 aa15.48■□□□□ 0.07
SF3B1-204ENST00000414963 RAB27AP51159 221 aa15.48■□□□□ 0.07
SF3B1-204ENST00000414963 FAM189BP81408 668 aa15.48■□□□□ 0.07
SF3B1-204ENST00000414963 PLCB2Q00722 1185 aa15.48■□□□□ 0.07
SF3B1-204ENST00000414963 KCNH2Q12809 1159 aa15.48■□□□□ 0.07
SF3B1-204ENST00000414963 TWF2Q6IBS0 349 aaKnown RBP15.48■□□□□ 0.07
SF3B1-204ENST00000414963 CD302Q8IX05 232 aa15.48■□□□□ 0.07
SF3B1-204ENST00000414963 CEP120Q8N960 986 aa15.48■□□□□ 0.07
SF3B1-204ENST00000414963 SEPT8Q92599 483 aa15.48■□□□□ 0.07
SF3B1-204ENST00000414963 APBB2Q92870 758 aa15.48■□□□□ 0.07
SF3B1-204ENST00000414963 TRIM43Q96BQ3 446 aaPredicted RBP15.48■□□□□ 0.07
SF3B1-204ENST00000414963 ACAP3Q96P50 834 aa15.48■□□□□ 0.07
SF3B1-204ENST00000414963 TSPAN18Q96SJ8 248 aa15.48■□□□□ 0.07
SF3B1-204ENST00000414963 CCDC94Q9BW85 323 aaPredicted RBP15.48■□□□□ 0.07
SF3B1-204ENST00000414963 TRIM6Q9C030 488 aaPredicted RBP15.48■□□□□ 0.07
SF3B1-204ENST00000414963 ASB7Q9H672 318 aa15.48■□□□□ 0.07
SF3B1-204ENST00000414963 RPF1Q9H9Y2 349 aaKnown RBP15.48■□□□□ 0.07
SF3B1-204ENST00000414963 RGS18Q9NS28 235 aa15.48■□□□□ 0.07
SF3B1-204ENST00000414963 A0A0U1RQF3 1178 aa15.47■□□□□ 0.07
SF3B1-204ENST00000414963 TTC26A0AVF1 554 aa15.47■□□□□ 0.07
SF3B1-204ENST00000414963 GTPBP10A4D1E9 387 aaKnown RBP15.47■□□□□ 0.07
SF3B1-204ENST00000414963 P4HA2O15460 535 aa15.47■□□□□ 0.07
SF3B1-204ENST00000414963 MEFVO15553 781 aaPredicted RBP15.47■□□□□ 0.07
SF3B1-204ENST00000414963 MGEA5O60502 916 aa15.47■□□□□ 0.07
SF3B1-204ENST00000414963 AFPP02771 609 aaKnown RBP15.47■□□□□ 0.07
SF3B1-204ENST00000414963 CDC25BP30305 580 aa15.47■□□□□ 0.07
SF3B1-204ENST00000414963 PBX1P40424 430 aa15.47■□□□□ 0.07
SF3B1-204ENST00000414963 AP3M2P53677 418 aa15.47■□□□□ 0.07
SF3B1-204ENST00000414963 DLG4P78352 724 aa15.47■□□□□ 0.07
SF3B1-204ENST00000414963 SLC10A6Q3KNW5 377 aa15.47■□□□□ 0.07
SF3B1-204ENST00000414963 SEZ6Q53EL9 994 aa15.47■□□□□ 0.07
SF3B1-204ENST00000414963 XKR4Q5GH76 650 aa15.47■□□□□ 0.07
SF3B1-204ENST00000414963 ALKAL1Q6UXT8 129 aa15.47■□□□□ 0.07
SF3B1-204ENST00000414963 RTN4RL1Q86UN2 441 aaPredicted RBP15.47■□□□□ 0.07
SF3B1-204ENST00000414963 TMEM192Q8IY95 271 aa15.47■□□□□ 0.07
SF3B1-204ENST00000414963 SMG8Q8ND04 991 aaKnown RBP15.47■□□□□ 0.07
SF3B1-204ENST00000414963 ADAM2Q99965 735 aa15.47■□□□□ 0.07
SF3B1-204ENST00000414963 PPP1R12CQ9BZL4 782 aa15.47■□□□□ 0.07
SF3B1-204ENST00000414963 TSPYL2Q9H2G4 693 aaPredicted RBP15.47■□□□□ 0.07
SF3B1-204ENST00000414963 PDE11AQ9HCR9 933 aa15.47■□□□□ 0.07
SF3B1-204ENST00000414963 FAM105AQ9NUU6 356 aa15.47■□□□□ 0.07
SF3B1-204ENST00000414963 IPPQ9Y573 584 aa15.47■□□□□ 0.07
SF3B1-204ENST00000414963 PCDHB2Q9Y5E7 798 aa15.47■□□□□ 0.07
SF3B1-204ENST00000414963 A0A1W2PQC6 194 aa15.46■□□□□ 0.07
SF3B1-204ENST00000414963 LRRIQ3A6PVS8 624 aaPredicted RBP15.46■□□□□ 0.07
SF3B1-204ENST00000414963 TEX33O43247 280 aa15.46■□□□□ 0.07
SF3B1-204ENST00000414963 CCL23P55773 120 aa15.46■□□□□ 0.07
SF3B1-204ENST00000414963 WNT7BP56706 349 aa15.46■□□□□ 0.07
SF3B1-204ENST00000414963 UBXN1Q04323 297 aa15.46■□□□□ 0.07
SF3B1-204ENST00000414963 PPP3CAQ08209 521 aa15.46■□□□□ 0.07
SF3B1-204ENST00000414963 DCAF17Q5H9S7 520 aaPredicted RBP15.46■□□□□ 0.07
SF3B1-204ENST00000414963 FKBP15Q5T1M5 1219 aa15.46■□□□□ 0.07
SF3B1-204ENST00000414963 MFSD5Q6N075 450 aa15.46■□□□□ 0.07
SF3B1-204ENST00000414963 C15orf39Q6ZRI6 1047 aa15.46■□□□□ 0.07
SF3B1-204ENST00000414963 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.46■□□□□ 0.07
SF3B1-204ENST00000414963 WDR49Q8IV35 697 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms