RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 CXCL8P10145 99 aa14.29□□□□□ -0.12
CNOT4-204ENST00000414802 ATF7P17544 494 aaPredicted RBP14.29□□□□□ -0.12
CNOT4-204ENST00000414802 AKAP5P24588 427 aa14.29□□□□□ -0.12
CNOT4-204ENST00000414802 RPL13P26373 211 aaKnown RBP14.29□□□□□ -0.12
CNOT4-204ENST00000414802 WNT7BP56706 349 aa14.29□□□□□ -0.12
CNOT4-204ENST00000414802 C16orf59Q7L2K0 433 aa14.29□□□□□ -0.12
CNOT4-204ENST00000414802 FAM84AQ96KN4 292 aa14.29□□□□□ -0.12
CNOT4-204ENST00000414802 ANP32EQ9BTT0 268 aa14.29□□□□□ -0.12
CNOT4-204ENST00000414802 RNF19AQ9NV58 838 aa14.29□□□□□ -0.12
CNOT4-204ENST00000414802 FANCLQ9NW38 375 aa14.29□□□□□ -0.12
CNOT4-204ENST00000414802 NLRC5Q86WI3 1866 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 C9IYK1 514 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 ENPP3O14638 875 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 MEFVO15553 781 aaPredicted RBP14.28□□□□□ -0.12
CNOT4-204ENST00000414802 RECQL4O94761 1208 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 GRM5P41594 1212 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 SNRNP35Q16560 246 aaKnown RBP14.28□□□□□ -0.12
CNOT4-204ENST00000414802 CCDC40Q4G0X9 1142 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 FOXR2Q6PJQ5 311 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.28□□□□□ -0.123e-10■■■■■ 29.8
CNOT4-204ENST00000414802 ZNF365Q70YC5 407 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 OTOP2Q7RTS6 562 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 APBB1IPQ7Z5R6 666 aaPredicted RBP14.28□□□□□ -0.12
CNOT4-204ENST00000414802 ECHDC2Q86YB7 292 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 CREBRFQ8IUR6 639 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 FAM186BQ8IYM0 893 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 RPUSD2Q8IZ73 545 aaKnown RBP14.28□□□□□ -0.12
CNOT4-204ENST00000414802 FAM212AQ96EL1 285 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 CNOT6LQ96LI5 555 aaKnown RBP14.28□□□□□ -0.12
CNOT4-204ENST00000414802 CEP63Q96MT8 703 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 LBHD1Q9BQE6 289 aaPredicted RBP14.28□□□□□ -0.12
CNOT4-204ENST00000414802 RBSNQ9H1K0 784 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 CXCL16Q9H2A7 254 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 HSD3B7Q9H2F3 369 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 PARP2Q9UGN5 583 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 CPSF3Q9UKF6 684 aaKnown RBP14.28□□□□□ -0.12
CNOT4-204ENST00000414802 FRMD4BQ9Y2L6 1034 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 NR2E3Q9Y5X4 410 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 COL4A6Q14031 1691 aa14.28□□□□□ -0.12
CNOT4-204ENST00000414802 SMTNL1A8MU46 457 aa14.27□□□□□ -0.12
CNOT4-204ENST00000414802 IKBKBO14920 756 aa14.27□□□□□ -0.12
CNOT4-204ENST00000414802 EPB41P11171 864 aaKnown RBP14.27□□□□□ -0.12
CNOT4-204ENST00000414802 MAGEA10P43363 369 aaPredicted RBP14.27□□□□□ -0.12
CNOT4-204ENST00000414802 RAB27AP51159 221 aa14.27□□□□□ -0.12
CNOT4-204ENST00000414802 IKBKEQ14164 716 aa14.27□□□□□ -0.12
CNOT4-204ENST00000414802 ENOX2Q16206 610 aaKnown RBP14.27□□□□□ -0.12
CNOT4-204ENST00000414802 IRF2BP1Q8IU81 584 aa14.27□□□□□ -0.12
CNOT4-204ENST00000414802 PLEKHO2Q8TD55 490 aa14.27□□□□□ -0.12
CNOT4-204ENST00000414802 FBXL18Q96ME1 805 aa14.27□□□□□ -0.12
CNOT4-204ENST00000414802 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.27□□□□□ -0.122e-7■■■□□ 14.8
CNOT4-204ENST00000414802 CCDC94Q9BW85 323 aaPredicted RBP14.27□□□□□ -0.12
CNOT4-204ENST00000414802 RBAKQ9NYW8 714 aaPredicted RBP14.27□□□□□ -0.12
CNOT4-204ENST00000414802 KLK14Q9P0G3 267 aa14.27□□□□□ -0.12
CNOT4-204ENST00000414802 A0A0U1RQF3 1178 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 ZBBXA8MT70 800 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 KIAA0391O15091 583 aaKnown RBP14.26□□□□□ -0.13
CNOT4-204ENST00000414802 SLC16A3O15427 465 aaKnown RBP14.26□□□□□ -0.13
CNOT4-204ENST00000414802 CAVIN2O95810 425 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 LDHAP00338 332 aaKnown RBP14.26□□□□□ -0.13
CNOT4-204ENST00000414802 PFKMP08237 780 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 CLTAP09496 248 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 ITGA4P13612 1032 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 DEFB103AP81534 67 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 CYP24A1Q07973 514 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 MYBPC2Q14324 1141 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 TMEM240Q5SV17 173 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 CDKAL1Q5VV42 579 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 LMBRD2Q68DH5 695 aaPredicted RBP14.26□□□□□ -0.13
CNOT4-204ENST00000414802 SLC24A5Q71RS6 500 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 TMCO2Q7Z6W1 182 aaPredicted RBP14.26□□□□□ -0.13
CNOT4-204ENST00000414802 ZNF598Q86UK7 904 aaKnown RBP14.26□□□□□ -0.13
CNOT4-204ENST00000414802 BRSK2Q8IWQ3 736 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 THAP9Q9H5L6 903 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 RPF1Q9H9Y2 349 aaKnown RBP14.26□□□□□ -0.13
CNOT4-204ENST00000414802 C1orf112Q9NSG2 853 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 ZNF233A6NK53 670 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 KCNJ18B7U540 433 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 TRIM49P0CI25 452 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 TRIM49CP0CI26 452 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 FGFR1P11362 822 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 ATP1A3P13637 1013 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 PSMC2P35998 433 aaKnown RBP14.26□□□□□ -0.13
CNOT4-204ENST00000414802 GATMP50440 423 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 WDR5P61964 334 aaKnown RBP14.26□□□□□ -0.13
CNOT4-204ENST00000414802 C1QBPQ07021 282 aaKnown RBP14.26□□□□□ -0.13
CNOT4-204ENST00000414802 SPAG1Q07617 926 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 KCNJ12Q14500 433 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 AGMOQ6ZNB7 445 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 FILIP1Q7Z7B0 1213 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 TMEM130Q8N3G9 435 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 TMEM174Q8WUU8 243 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 SNX27Q96L92 541 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 ACAP3Q96P50 834 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 TRAIPQ9BWF2 469 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 PDE11AQ9HCR9 933 aa14.26□□□□□ -0.13
CNOT4-204ENST00000414802 TOPORSQ9NS56 1045 aaPredicted RBP14.26□□□□□ -0.13
CNOT4-204ENST00000414802 GOLGA6L19H0YKK7 550 aa14.25□□□□□ -0.13
CNOT4-204ENST00000414802 UPP2O95045 317 aa14.25□□□□□ -0.13
CNOT4-204ENST00000414802 FGFR1OPO95684 399 aaKnown RBP14.25□□□□□ -0.13
CNOT4-204ENST00000414802 FGBP02675 491 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms