RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 USP25Q9UHP3 1055 aa27.7■■■□□ 2.02
CPNE1-207ENST00000414664 PLXNA4Q9HCM2 1894 aa27.7■■■□□ 2.02
CPNE1-207ENST00000414664 ABLIM1O14639 778 aa27.69■■■□□ 2.02
CPNE1-207ENST00000414664 CSPG5O95196 566 aa27.69■■■□□ 2.02
CPNE1-207ENST00000414664 DSC1Q08554 894 aa27.69■■■□□ 2.02
CPNE1-207ENST00000414664 BMS1Q14692 1282 aaKnown RBP27.69■■■□□ 2.02
CPNE1-207ENST00000414664 TCEAL5Q5H9L2 206 aa27.69■■■□□ 2.02
CPNE1-207ENST00000414664 CNNM4Q6P4Q7 775 aa27.69■■■□□ 2.02
CPNE1-207ENST00000414664 COLGALT2Q8IYK4 626 aa27.69■■■□□ 2.02
CPNE1-207ENST00000414664 IGSF21Q96ID5 467 aa27.69■■■□□ 2.02
CPNE1-207ENST00000414664 ZBTB45Q96K62 511 aaPredicted RBP27.69■■■□□ 2.02
CPNE1-207ENST00000414664 C7orf25Q9BPX7 421 aa27.69■■■□□ 2.02
CPNE1-207ENST00000414664 COG5Q9UP83 839 aa27.69■■■□□ 2.02
CPNE1-207ENST00000414664 A0A1B0GVL5 298 aa27.68■■■□□ 2.02
CPNE1-207ENST00000414664 A0A1W2PQ27 194 aa27.68■■■□□ 2.02
CPNE1-207ENST00000414664 A0A1W2PQ64 194 aa27.68■■■□□ 2.02
CPNE1-207ENST00000414664 A0A1W2PQD8 194 aa27.68■■■□□ 2.02
CPNE1-207ENST00000414664 NCK2O43639 380 aa27.68■■■□□ 2.02
CPNE1-207ENST00000414664 THP07101 528 aa27.68■■■□□ 2.02
CPNE1-207ENST00000414664 SLFN14P0C7P3 912 aa27.68■■■□□ 2.02
CPNE1-207ENST00000414664 HARSP12081 509 aaKnown RBP27.68■■■□□ 2.02
CPNE1-207ENST00000414664 PFKFB1P16118 471 aa27.68■■■□□ 2.02
CPNE1-207ENST00000414664 OR1G1P47890 313 aa27.68■■■□□ 2.02
CPNE1-207ENST00000414664 ASIC1P78348 528 aa27.68■■■□□ 2.02
CPNE1-207ENST00000414664 MCL1Q07820 350 aa27.68■■■□□ 2.02
CPNE1-207ENST00000414664 ALCAMQ13740 583 aa27.68■■■□□ 2.02
CPNE1-207ENST00000414664 KYAT1Q16773 422 aa27.68■■■□□ 2.02
CPNE1-207ENST00000414664 MAP4K3Q8IVH8 894 aa27.68■■■□□ 2.02
CPNE1-207ENST00000414664 ACAP3Q96P50 834 aa27.68■■■□□ 2.02
CPNE1-207ENST00000414664 PCDHB13Q9Y5F0 798 aa27.68■■■□□ 2.02
CPNE1-207ENST00000414664 TDRD15B5MCY1 1934 aaKnown RBP27.68■■■□□ 2.02
CPNE1-207ENST00000414664 NRP1O14786 923 aa27.67■■■□□ 2.02
CPNE1-207ENST00000414664 OSTNP61366 133 aa27.67■■■□□ 2.02
CPNE1-207ENST00000414664 ZC2HC1CQ53FD0 456 aaPredicted RBP27.67■■■□□ 2.02
CPNE1-207ENST00000414664 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.67■■■□□ 2.02
CPNE1-207ENST00000414664 NGRNQ9NPE2 291 aaKnown RBP27.67■■■□□ 2.02
CPNE1-207ENST00000414664 TBC1D7Q9P0N9 293 aa27.67■■■□□ 2.02
CPNE1-207ENST00000414664 THEGQ9P2T0 379 aa27.67■■■□□ 2.02
CPNE1-207ENST00000414664 EXOC7Q9UPT5 735 aa27.67■■■□□ 2.02
CPNE1-207ENST00000414664 HPSEQ9Y251 543 aa27.67■■■□□ 2.02
CPNE1-207ENST00000414664 B4GALT3O60512 393 aa27.66■■■□□ 2.02
CPNE1-207ENST00000414664 GCNT3O95395 438 aa27.66■■■□□ 2.02
CPNE1-207ENST00000414664 IRS1P35568 1242 aa27.66■■■□□ 2.02
CPNE1-207ENST00000414664 STXBP4Q6ZWJ1 553 aa27.66■■■□□ 2.02
CPNE1-207ENST00000414664 TMC7Q7Z402 723 aa27.66■■■□□ 2.02
CPNE1-207ENST00000414664 DDX53Q86TM3 631 aaKnown RBP27.66■■■□□ 2.02
CPNE1-207ENST00000414664 CEP120Q8N960 986 aa27.66■■■□□ 2.02
CPNE1-207ENST00000414664 HLA-CQ95604 372 aa27.66■■■□□ 2.02
CPNE1-207ENST00000414664 COLEC11Q9BWP8 271 aa27.66■■■□□ 2.02
CPNE1-207ENST00000414664 GDPD2Q9HCC8 539 aa27.66■■■□□ 2.02
CPNE1-207ENST00000414664 ENTPD7Q9NQZ7 604 aa27.66■■■□□ 2.02
CPNE1-207ENST00000414664 SERTAD1Q9UHV2 236 aa27.66■■■□□ 2.02
CPNE1-207ENST00000414664 SYKP43405 635 aa27.65■■■□□ 2.02
CPNE1-207ENST00000414664 ERVFC1P60507 584 aa27.65■■■□□ 2.02
CPNE1-207ENST00000414664 TUSC3Q13454 348 aa27.65■■■□□ 2.02
CPNE1-207ENST00000414664 SLFN12LQ6IEE8 588 aa27.65■■■□□ 2.02
CPNE1-207ENST00000414664 ACCSQ96QU6 501 aa27.65■■■□□ 2.02
CPNE1-207ENST00000414664 TCF25Q9BQ70 676 aa27.65■■■□□ 2.02
CPNE1-207ENST00000414664 STRA6Q9BX79 667 aa27.65■■■□□ 2.02
CPNE1-207ENST00000414664 PRDM6Q9NQX0 595 aa27.65■■■□□ 2.02
CPNE1-207ENST00000414664 FAM237AA0A1B0GTK4 181 aa27.64■■■□□ 2.02
CPNE1-207ENST00000414664 GOLGA6L4A6NEF3 574 aa27.64■■■□□ 2.02
CPNE1-207ENST00000414664 PTGESO14684 152 aa27.64■■■□□ 2.02
CPNE1-207ENST00000414664 FSCN2O14926 492 aa27.64■■■□□ 2.02
CPNE1-207ENST00000414664 PPP1R37O75864 691 aa27.64■■■□□ 2.02
CPNE1-207ENST00000414664 AFMP43652 599 aa27.64■■■□□ 2.02
CPNE1-207ENST00000414664 COASYQ13057 564 aa27.64■■■□□ 2.02
CPNE1-207ENST00000414664 L1TD1Q5T7N2 865 aaKnown RBP27.64■■■□□ 2.02
CPNE1-207ENST00000414664 TMEM173Q86WV6 379 aaPredicted RBP27.64■■■□□ 2.02
CPNE1-207ENST00000414664 FSIP1Q8NA03 581 aa27.64■■■□□ 2.02
CPNE1-207ENST00000414664 PRG3Q9Y2Y8 225 aaPredicted RBP27.64■■■□□ 2.02
CPNE1-207ENST00000414664 CLTAP09496 248 aa27.63■■■□□ 2.01
CPNE1-207ENST00000414664 SMC1AQ14683 1233 aaKnown RBP27.63■■■□□ 2.01
CPNE1-207ENST00000414664 AAK1Q2M2I8 961 aa27.63■■■□□ 2.01
CPNE1-207ENST00000414664 ALKAL1Q6UXT8 129 aa27.63■■■□□ 2.01
CPNE1-207ENST00000414664 UNC13DQ70J99 1090 aa27.63■■■□□ 2.01
CPNE1-207ENST00000414664 VPS52Q8N1B4 723 aa27.63■■■□□ 2.01
CPNE1-207ENST00000414664 ATXN2LQ8WWM7 1075 aaKnown RBP27.63■■■□□ 2.01
CPNE1-207ENST00000414664 PVALEFA0A1B0GWK0 134 aa27.62■■■□□ 2.01
CPNE1-207ENST00000414664 FSD2A1L4K1 749 aa27.62■■■□□ 2.01
CPNE1-207ENST00000414664 ACTN4O43707 911 aaKnown RBP27.62■■■□□ 2.01
CPNE1-207ENST00000414664 NDUFA8P51970 172 aa27.62■■■□□ 2.01
CPNE1-207ENST00000414664 POSTNQ15063 836 aa27.62■■■□□ 2.01
CPNE1-207ENST00000414664 TPRNQ4KMQ1 711 aa27.62■■■□□ 2.01
CPNE1-207ENST00000414664 XKR4Q5GH76 650 aa27.62■■■□□ 2.01
CPNE1-207ENST00000414664 PLPP4Q5VZY2 271 aa27.62■■■□□ 2.01
CPNE1-207ENST00000414664 BCL7CQ8WUZ0 217 aaPredicted RBP27.62■■■□□ 2.01
CPNE1-207ENST00000414664 PABPC5Q96DU9 382 aaKnown RBP27.62■■■□□ 2.01
CPNE1-207ENST00000414664 SNX27Q96L92 541 aa27.62■■■□□ 2.01
CPNE1-207ENST00000414664 MSTO1Q9BUK6 570 aa27.62■■■□□ 2.01
CPNE1-207ENST00000414664 TLE6Q9H808 572 aa27.62■■■□□ 2.01
CPNE1-207ENST00000414664 TMEM206Q9H813 350 aa27.62■■■□□ 2.01
CPNE1-207ENST00000414664 SLC38A7Q9NVC3 462 aa27.62■■■□□ 2.01
CPNE1-207ENST00000414664 ATG2AQ2TAZ0 1938 aa27.61■■■□□ 2.01
CPNE1-207ENST00000414664 A0A0B4J269 797 aa27.61■■■□□ 2.01
CPNE1-207ENST00000414664 SMIM28A0A1B0GU29 152 aa27.61■■■□□ 2.01
CPNE1-207ENST00000414664 OGTO15294 1046 aa27.61■■■□□ 2.01
CPNE1-207ENST00000414664 MYL1P05976 194 aa27.61■■■□□ 2.01
CPNE1-207ENST00000414664 MYBP10242 640 aa27.61■■■□□ 2.01
CPNE1-207ENST00000414664 HYAL1Q12794 435 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms