RNA–Protein interactions for RNA: ENST00000414543.5

TRIM27-203, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-203ENST00000414543 FBXL13Q8NEE6 735 aa11.13□□□□□ -0.63
TRIM27-203ENST00000414543 LMO3Q8TAP4 145 aa11.13□□□□□ -0.63
TRIM27-203ENST00000414543 RAET1EQ8TD07 263 aa11.13□□□□□ -0.63
TRIM27-203ENST00000414543 PPP1R13LQ8WUF5 828 aa11.13□□□□□ -0.63
TRIM27-203ENST00000414543 ZNF592Q92610 1267 aa11.13□□□□□ -0.63
TRIM27-203ENST00000414543 VTI1AQ96AJ9 217 aa11.13□□□□□ -0.63
TRIM27-203ENST00000414543 ERO1AQ96HE7 468 aa11.13□□□□□ -0.63
TRIM27-203ENST00000414543 MTG1Q9BT17 334 aaPredicted RBP11.13□□□□□ -0.63
TRIM27-203ENST00000414543 STK33Q9BYT3 514 aa11.13□□□□□ -0.63
TRIM27-203ENST00000414543 PDE11AQ9HCR9 933 aa11.13□□□□□ -0.63
TRIM27-203ENST00000414543 XPNPEP3Q9NQH7 507 aa11.13□□□□□ -0.63
TRIM27-203ENST00000414543 TOPORSQ9NS56 1045 aaPredicted RBP11.13□□□□□ -0.63
TRIM27-203ENST00000414543 COQ4Q9Y3A0 265 aa11.13□□□□□ -0.63
TRIM27-203ENST00000414543 BZW2Q9Y6E2 419 aaKnown RBP11.13□□□□□ -0.63
TRIM27-203ENST00000414543 MYADML2A6NDP7 307 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 B4GALT5O43286 388 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 CSDE1O75534 798 aaKnown RBP11.12□□□□□ -0.63
TRIM27-203ENST00000414543 HMGCRP04035 888 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 IQCF3P0C7M6 154 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 PROZP22891 400 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 JAM2P57087 298 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 CLDN10P78369 228 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 ADAM17P78536 824 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 MAPK8IP2Q13387 824 aaPredicted RBP11.12□□□□□ -0.63
TRIM27-203ENST00000414543 DRAP1Q14919 205 aaPredicted RBP11.12□□□□□ -0.63
TRIM27-203ENST00000414543 SURF1Q15526 300 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 ARHGAP29Q52LW3 1261 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 ZBTB41Q5SVQ8 909 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 HGSNATQ68CP4 663 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 PHLDB3Q6NSJ2 640 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 SV2AQ7L0J3 742 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 GPIHBP1Q8IV16 184 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 BRSK2Q8IWQ3 736 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 GCOM2Q9BZD3 368 aaPredicted RBP11.12□□□□□ -0.63
TRIM27-203ENST00000414543 PTPRHQ9HD43 1115 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 UBE2TQ9NPD8 197 aaPredicted RBP11.12□□□□□ -0.63
TRIM27-203ENST00000414543 RAB20Q9NX57 234 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 HDAC6Q9UBN7 1215 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 ABLIM1O14639 778 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 TREHO43280 583 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 FKTNO75072 461 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 CCDC172P0C7W6 258 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 FERP16591 822 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 CCND3P30281 292 aaPredicted RBP11.12□□□□□ -0.63
TRIM27-203ENST00000414543 TNFSF9P41273 254 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 KIF11P52732 1056 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 HTRA3P83110 453 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 NCBP1Q09161 790 aaKnown RBP11.12□□□□□ -0.63
TRIM27-203ENST00000414543 ENOX2Q16206 610 aaKnown RBP11.12□□□□□ -0.63
TRIM27-203ENST00000414543 ARHGAP44Q17R89 818 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 KIZQ2M2Z5 673 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 EEF1DP3Q658K8 133 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 KIAA1328Q86T90 577 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 CDR2LQ86X02 465 aaPredicted RBP11.12□□□□□ -0.63
TRIM27-203ENST00000414543 THNSL1Q8IYQ7 743 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 NT5C1BQ96P26 610 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 CGRRF1Q99675 332 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 LZTFL1Q9NQ48 299 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 AJAP1Q9UKB5 411 aaPredicted RBP11.12□□□□□ -0.63
TRIM27-203ENST00000414543 GINS2Q9Y248 185 aa11.12□□□□□ -0.63
TRIM27-203ENST00000414543 CNTNAP2Q9UHC6 1331 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 FAM189A1O60320 539 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 MYCNP04198 464 aaPredicted RBP11.11□□□□□ -0.63
TRIM27-203ENST00000414543 MCF2P10911 925 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 SOX5P35711 763 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 AP3M2P53677 418 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 ETF1P62495 437 aaKnown RBP11.11□□□□□ -0.63
TRIM27-203ENST00000414543 NKX3-2P78367 333 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 TMEM62Q0P6H9 643 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 BIRC3Q13489 604 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 AMHR2Q16671 573 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 LMBRD2Q68DH5 695 aaPredicted RBP11.11□□□□□ -0.63
TRIM27-203ENST00000414543 CXCL17Q6UXB2 119 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 RUFY4Q6ZNE9 571 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 IRF2BP2Q7Z5L9 587 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 NME8Q8N427 588 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 KIF18AQ8NI77 898 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 TAS1R2Q8TE23 839 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 PXYLP1Q8TE99 480 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 DNAJB3Q8WWF6 145 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 ZNF516Q92618 1163 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 SEMA4DQ92854 862 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 FAM212AQ96EL1 285 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 ADPGKQ9BRR6 497 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.11□□□□□ -0.63
TRIM27-203ENST00000414543 CDT1Q9H211 546 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 ADAMTS10Q9H324 1103 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 HAUS4Q9H6D7 363 aa11.11□□□□□ -0.63
TRIM27-203ENST00000414543 CPSF3Q9UKF6 684 aaKnown RBP11.11□□□□□ -0.63
TRIM27-203ENST00000414543 F8VZ95 297 aa11.1□□□□□ -0.63
TRIM27-203ENST00000414543 TSPAN1O60635 241 aa11.1□□□□□ -0.63
TRIM27-203ENST00000414543 ZC3H11AO75152 810 aaKnown RBP eCLIP11.1□□□□□ -0.631e-11■■■■□ 21.9
TRIM27-203ENST00000414543 PHACTR2O75167 634 aa11.1□□□□□ -0.63
TRIM27-203ENST00000414543 ADAMTS4O75173 837 aa11.1□□□□□ -0.63
TRIM27-203ENST00000414543 LRRN2O75325 713 aa11.1□□□□□ -0.63
TRIM27-203ENST00000414543 GPR32O75388 356 aa11.1□□□□□ -0.63
TRIM27-203ENST00000414543 GFPT2O94808 682 aa11.1□□□□□ -0.63
TRIM27-203ENST00000414543 C4BPAP04003 597 aaKnown RBP11.1□□□□□ -0.63
TRIM27-203ENST00000414543 ARF4P18085 180 aaPredicted RBP11.1□□□□□ -0.63
TRIM27-203ENST00000414543 PRKCIP41743 596 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms