RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ZNF720Q7Z2F6 126 aa16.09■□□□□ 0.17
CHD1-202ENST00000414220 ZNF280BQ86YH2 543 aa16.09■□□□□ 0.17
CHD1-202ENST00000414220 ATXN2LQ8WWM7 1075 aaKnown RBP16.09■□□□□ 0.17
CHD1-202ENST00000414220 DNAJC19Q96DA6 116 aa16.09■□□□□ 0.17
CHD1-202ENST00000414220 IGSF21Q96ID5 467 aa16.09■□□□□ 0.17
CHD1-202ENST00000414220 ACCSQ96QU6 501 aa16.09■□□□□ 0.17
CHD1-202ENST00000414220 TCF25Q9BQ70 676 aa16.09■□□□□ 0.17
CHD1-202ENST00000414220 TMEM206Q9H813 350 aa16.09■□□□□ 0.17
CHD1-202ENST00000414220 OLFML3Q9NRN5 406 aa16.09■□□□□ 0.17
CHD1-202ENST00000414220 SLC38A7Q9NVC3 462 aa16.09■□□□□ 0.17
CHD1-202ENST00000414220 SSX2IPQ9Y2D8 614 aa16.09■□□□□ 0.17
CHD1-202ENST00000414220 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.09■□□□□ 0.17
CHD1-202ENST00000414220 MYH15Q9Y2K3 1946 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 A0A1W2PQ27 194 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 A0A1W2PQ64 194 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 A0A1W2PQD8 194 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 NRP1O14786 923 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 DDHD2O94830 711 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 EDN1P05305 212 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 SRGAP2BP0DMP2 458 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 PBX3P40426 434 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 SLC11A1P49279 550 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 OSTNP61366 133 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 MCL1Q07820 350 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 TUSC3Q13454 348 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 POSTNQ15063 836 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 EP400NLQ6ZTU2 488 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 DDX53Q86TM3 631 aaKnown RBP16.08■□□□□ 0.16
CHD1-202ENST00000414220 MAP4K3Q8IVH8 894 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 COLGALT2Q8IYK4 626 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 SYCP3Q8IZU3 236 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 STAMQ92783 540 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 CCDC47Q96A33 483 aaKnown RBP16.08■□□□□ 0.16
CHD1-202ENST00000414220 CDCA3Q99618 268 aaPredicted RBP16.08■□□□□ 0.16
CHD1-202ENST00000414220 C7orf25Q9BPX7 421 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 TRIM9Q9C026 710 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 TLE6Q9H808 572 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 DNAJB4Q9UDY4 337 aa16.08■□□□□ 0.16
CHD1-202ENST00000414220 A0A1B0GVL5 298 aa16.07■□□□□ 0.16
CHD1-202ENST00000414220 FRMD3A2A2Y4 597 aa16.07■□□□□ 0.16
CHD1-202ENST00000414220 PIGRP01833 764 aa16.07■□□□□ 0.16
CHD1-202ENST00000414220 MYL1P05976 194 aa16.07■□□□□ 0.16
CHD1-202ENST00000414220 SLFN14P0C7P3 912 aa16.07■□□□□ 0.16
CHD1-202ENST00000414220 PFKFB1P16118 471 aa16.07■□□□□ 0.16
CHD1-202ENST00000414220 SYKP43405 635 aa16.07■□□□□ 0.16
CHD1-202ENST00000414220 AFF1P51825 1210 aaKnown RBP16.07■□□□□ 0.16
CHD1-202ENST00000414220 MRPS5P82675 430 aaKnown RBP16.07■□□□□ 0.16
CHD1-202ENST00000414220 VPS52Q8N1B4 723 aa16.07■□□□□ 0.16
CHD1-202ENST00000414220 PABPC5Q96DU9 382 aaKnown RBP16.07■□□□□ 0.16
CHD1-202ENST00000414220 MSTO1Q9BUK6 570 aa16.07■□□□□ 0.16
CHD1-202ENST00000414220 IGFLR1Q9H665 355 aa16.07■□□□□ 0.16
CHD1-202ENST00000414220 MIOSQ9NXC5 875 aa16.07■□□□□ 0.16
CHD1-202ENST00000414220 TBC1D7Q9P0N9 293 aa16.07■□□□□ 0.16
CHD1-202ENST00000414220 PRG3Q9Y2Y8 225 aaPredicted RBP16.07■□□□□ 0.16
CHD1-202ENST00000414220 NLRC5Q86WI3 1866 aa16.07■□□□□ 0.16
CHD1-202ENST00000414220 CHD9Q3L8U1 2897 aa16.07■□□□□ 0.16
CHD1-202ENST00000414220 PVALEFA0A1B0GWK0 134 aa16.06■□□□□ 0.16
CHD1-202ENST00000414220 XPOTO43592 962 aaKnown RBP16.06■□□□□ 0.16
CHD1-202ENST00000414220 TADA2AO75478 443 aa16.06■□□□□ 0.16
CHD1-202ENST00000414220 CXCL14O95715 111 aa16.06■□□□□ 0.16
CHD1-202ENST00000414220 CLTAP09496 248 aa16.06■□□□□ 0.16
CHD1-202ENST00000414220 DNAJB1P25685 340 aa16.06■□□□□ 0.16
CHD1-202ENST00000414220 AFMP43652 599 aa16.06■□□□□ 0.16
CHD1-202ENST00000414220 ERVFC1P60507 584 aa16.06■□□□□ 0.16
CHD1-202ENST00000414220 DSC1Q08554 894 aa16.06■□□□□ 0.16
CHD1-202ENST00000414220 CAMK1Q14012 370 aa16.06■□□□□ 0.16
CHD1-202ENST00000414220 ZC2HC1CQ53FD0 456 aaPredicted RBP16.06■□□□□ 0.16
CHD1-202ENST00000414220 L1TD1Q5T7N2 865 aaKnown RBP16.06■□□□□ 0.16
CHD1-202ENST00000414220 PLPP4Q5VZY2 271 aa16.06■□□□□ 0.16
CHD1-202ENST00000414220 CNNM4Q6P4Q7 775 aa16.06■□□□□ 0.16
CHD1-202ENST00000414220 FSIP1Q8NA03 581 aa16.06■□□□□ 0.16
CHD1-202ENST00000414220 ZBTB45Q96K62 511 aaPredicted RBP16.06■□□□□ 0.16
CHD1-202ENST00000414220 UROC1Q96N76 676 aa16.06■□□□□ 0.16
CHD1-202ENST00000414220 FIZ1Q96SL8 496 aa16.06■□□□□ 0.16
CHD1-202ENST00000414220 PLEKHA5Q9HAU0 1116 aa16.06■□□□□ 0.16
CHD1-202ENST00000414220 CLDND1Q9NY35 253 aa16.06■□□□□ 0.16
CHD1-202ENST00000414220 FSCN2O14926 492 aa16.05■□□□□ 0.16
CHD1-202ENST00000414220 OGTO15294 1046 aa16.05■□□□□ 0.16
CHD1-202ENST00000414220 IRS1P35568 1242 aa16.05■□□□□ 0.16
CHD1-202ENST00000414220 ELAVL2Q12926 359 aaKnown RBP16.05■□□□□ 0.16
CHD1-202ENST00000414220 COASYQ13057 564 aa16.05■□□□□ 0.16
CHD1-202ENST00000414220 HSP90AA2PQ14568 343 aaPredicted RBP16.05■□□□□ 0.16
CHD1-202ENST00000414220 PUS10Q3MIT2 529 aaKnown RBP16.05■□□□□ 0.16
CHD1-202ENST00000414220 TPRNQ4KMQ1 711 aa16.05■□□□□ 0.16
CHD1-202ENST00000414220 KIAA1841Q6NSI8 718 aa16.05■□□□□ 0.16
CHD1-202ENST00000414220 KANK3Q6NY19 840 aa16.05■□□□□ 0.16
CHD1-202ENST00000414220 UNC13DQ70J99 1090 aa16.05■□□□□ 0.16
CHD1-202ENST00000414220 CD302Q8IX05 232 aa16.05■□□□□ 0.16
CHD1-202ENST00000414220 GSTCDQ8NEC7 633 aa16.05■□□□□ 0.16
CHD1-202ENST00000414220 DDX27Q96GQ7 796 aaKnown RBP16.05■□□□□ 0.16
CHD1-202ENST00000414220 TSPAN18Q96SJ8 248 aa16.05■□□□□ 0.16
CHD1-202ENST00000414220 EMILIN2Q9BXX0 1053 aa16.05■□□□□ 0.16
CHD1-202ENST00000414220 UBE2ZQ9H832 354 aaPredicted RBP16.05■□□□□ 0.16
CHD1-202ENST00000414220 RPF1Q9H9Y2 349 aaKnown RBP16.05■□□□□ 0.16
CHD1-202ENST00000414220 MRPL17Q9NRX2 175 aaKnown RBP16.05■□□□□ 0.16
CHD1-202ENST00000414220 SERTAD1Q9UHV2 236 aa16.05■□□□□ 0.16
CHD1-202ENST00000414220 FAM50BQ9Y247 325 aa16.05■□□□□ 0.16
CHD1-202ENST00000414220 MYH11P35749 1972 aa16.04■□□□□ 0.16
CHD1-202ENST00000414220 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.04■□□□□ 0.16
CHD1-202ENST00000414220 SMIM28A0A1B0GU29 152 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms