RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-204ENST00000414099 RPAP3Q9H6T3 665 aaPredicted RBP11.24□□□□□ -0.61
SCN5A-204ENST00000414099 ALKQ9UM73 1620 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 GRIK1P39086 918 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 PSMD7P51665 324 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 CASP8Q14790 479 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 RESP18Q5W5W9 173 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 PRUNE1Q86TP1 453 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 PPHLN1Q8NEY8 458 aaKnown RBP11.23□□□□□ -0.61
SCN5A-204ENST00000414099 SNF8Q96H20 258 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 EGFL8Q99944 293 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 MAGED2Q9UNF1 606 aaPredicted RBP11.23□□□□□ -0.61
SCN5A-204ENST00000414099 ANO9A1A5B4 782 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 ENC1O14682 589 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 WDR47O94967 919 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 KNOP1Q1ED39 458 aaKnown RBP11.23□□□□□ -0.61
SCN5A-204ENST00000414099 PROSER3Q2NL68 480 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 KCTD17Q8N5Z5 321 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 ATP11CQ8NB49 1132 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 KIF12Q96FN5 646 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 CYTH2Q99418 400 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 ADA2Q9NZK5 511 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 PCDHA10Q9Y5I2 948 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 MAGI3Q5TCQ9 1506 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 CLTCL1P53675 1640 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 UNC13BO14795 1591 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 KAT6AQ92794 2004 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 C5orf58C9J3I9 102 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 RPS12P25398 132 aaKnown RBP11.23□□□□□ -0.61
SCN5A-204ENST00000414099 PSMA4P25789 261 aaKnown RBP11.23□□□□□ -0.61
SCN5A-204ENST00000414099 TJAP1Q5JTD0 557 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 TMEM270Q6UE05 265 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 C19orf60Q96EN9 201 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 ZFYVE19Q96K21 471 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 CCDC90BQ9GZT6 254 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 CLCA2Q9UQC9 943 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 NLRP11P59045 1033 aaKnown RBP11.23□□□□□ -0.61
SCN5A-204ENST00000414099 GRM4Q14833 912 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 TBC1D1Q86TI0 1168 aaPredicted RBP11.23□□□□□ -0.61
SCN5A-204ENST00000414099 USP13Q92995 863 aaPredicted RBP11.23□□□□□ -0.61
SCN5A-204ENST00000414099 FTCDO95954 541 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 B4GALNT2Q8NHY0 566 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 CRAMP1Q96RY5 1269 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 STRBPQ96SI9 672 aaKnown RBP11.23□□□□□ -0.61
SCN5A-204ENST00000414099 TDRD3Q9H7E2 651 aaKnown RBP11.23□□□□□ -0.61
SCN5A-204ENST00000414099 RBAKQ9NYW8 714 aaPredicted RBP11.23□□□□□ -0.61
SCN5A-204ENST00000414099 STMN3Q9NZ72 180 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 GABBR1Q9UBS5 961 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 SLC9A2Q9UBY0 812 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 PLA2R1Q13018 1463 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 IL18RAPO95256 599 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 SPP2Q13103 211 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 KRR1Q13601 381 aaKnown RBP11.23□□□□□ -0.61
SCN5A-204ENST00000414099 GPD1LQ8N335 351 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 SPATA16Q9BXB7 569 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 NRBP1Q9UHY1 535 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 PCDHB7Q9Y5E2 793 aa11.23□□□□□ -0.61
SCN5A-204ENST00000414099 BAZ2BQ9UIF8 2168 aaKnown RBP11.23□□□□□ -0.61
SCN5A-204ENST00000414099 MRPS15P82914 257 aaKnown RBP11.22□□□□□ -0.61
SCN5A-204ENST00000414099 ALKBH5Q6P6C2 394 aaKnown RBP11.22□□□□□ -0.61
SCN5A-204ENST00000414099 BRINP3Q76B58 766 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 RUBCNLQ9H714 662 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 CASS4Q9NQ75 786 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 BARHL2Q9NY43 387 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 SESN1Q9Y6P5 492 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 PVALEFA0A1B0GWK0 134 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 MAFGO15525 162 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 KRT17Q04695 432 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 HABP4Q5JVS0 413 aaKnown RBP11.22□□□□□ -0.61
SCN5A-204ENST00000414099 PIGOQ8TEQ8 1089 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 FAM32AQ9Y421 112 aaKnown RBP11.22□□□□□ -0.61
SCN5A-204ENST00000414099 ZSCAN9O15535 394 aaPredicted RBP11.22□□□□□ -0.61
SCN5A-204ENST00000414099 ACSL3O95573 720 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 EIF2S1P05198 315 aaKnown RBP11.22□□□□□ -0.61
SCN5A-204ENST00000414099 CETPP11597 493 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 SLCO1A2P46721 670 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 DHX34Q14147 1143 aaKnown RBP11.22□□□□□ -0.61
SCN5A-204ENST00000414099 ALX1Q15699 326 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 E4F1Q66K89 784 aaPredicted RBP11.22□□□□□ -0.61
SCN5A-204ENST00000414099 RAD54LQ92698 747 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 BPIFA3Q9BQP9 254 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 CNOT8Q9UFF9 292 aaKnown RBP11.22□□□□□ -0.61
SCN5A-204ENST00000414099 H7C1W4 665 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 KIF1CO43896 1103 aaKnown RBP11.22□□□□□ -0.61
SCN5A-204ENST00000414099 FAM107AO95990 144 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 BLVRAP53004 296 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 PTPN12Q05209 780 aaKnown RBP11.22□□□□□ -0.61
SCN5A-204ENST00000414099 ADCK1Q86TW2 530 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 TTC30BQ8N4P2 665 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 TEX13BQ9BXU2 312 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 SMARCAL1Q9NZC9 954 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 CAB39Q9Y376 341 aaPredicted RBP11.22□□□□□ -0.61
SCN5A-204ENST00000414099 PMS2P54278 862 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 SNRPFP62306 86 aaKnown RBP11.22□□□□□ -0.61
SCN5A-204ENST00000414099 PKN3Q6P5Z2 889 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 C16orf89Q6UX73 402 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 DDX53Q86TM3 631 aaKnown RBP11.22□□□□□ -0.61
SCN5A-204ENST00000414099 PJA2O43164 708 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 FGGP02679 453 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 MCAMP43121 646 aa11.22□□□□□ -0.61
SCN5A-204ENST00000414099 SWSAP1Q6NVH7 229 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms