RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 ANGPT1Q15389 498 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 ERMP1Q7Z2K6 904 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 KRT25Q7Z3Z0 450 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 GPR149Q86SP6 731 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 SIX5Q8N196 739 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 TMEM87AQ8NBN3 555 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 HINFPQ9BQA5 517 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 SH2D3AQ9BRG2 576 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 PHF20Q9BVI0 1012 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 GBP3Q9H0R5 595 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 DISC1Q9NRI5 854 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 DNAJB4Q9UDY4 337 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 TSR3Q9UJK0 312 aaKnown RBP9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 FBXL21Q9UKT6 434 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 PIN4Q9Y237 131 aaKnown RBP9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 IRAK3Q9Y616 596 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 A0A087WZ62 844 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 EDIL3O43854 480 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 N4BP1O75113 896 aaKnown RBP9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 CD2BP2O95400 341 aaKnown RBP9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 GALTP07902 379 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 SFPQP23246 707 aaKnown RBP eCLIP9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 CIITAP33076 1130 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 CLCN4P51793 760 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 TDGQ13569 410 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 GNL2Q13823 731 aaKnown RBP9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 GIT2Q14161 759 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 AGERQ15109 404 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 SAFBQ15424 915 aaKnown RBP eCLIP9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 TARBP2Q15633 366 aaKnown RBP9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 NPY5RQ15761 445 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 INF2Q27J81 1249 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 MTERF2Q49AM1 385 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 NOMO2Q5JPE7 1267 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 TWF2Q6IBS0 349 aaKnown RBP9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 GLB1LQ6UWU2 654 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 OTOP3Q7RTS5 596 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 ZNF280BQ86YH2 543 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 DTWD2Q8NBA8 298 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 TPCN2Q8NHX9 752 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 TBCKQ8TEA7 893 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 TMX3Q96JJ7 454 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 C8orf76Q96K31 380 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 CEP89Q96ST8 783 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 FDXACB1Q9BRP7 624 aaPredicted RBP9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 GCOM2Q9BZD3 368 aaPredicted RBP9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 UNC45AQ9H3U1 944 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 KCNK12Q9HB15 430 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 PRDM9Q9NQV7 894 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 FAM105AQ9NUU6 356 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 KIAA1024Q9UPX6 916 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 KIF3AQ9Y496 699 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 GPR179Q6PRD1 2367 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 ZNF292O60281 2723 aa9.22□□□□□ -0.93
UPF3AP1-201ENST00000413731 VWA8A3KMH1 1905 aa9.21□□□□□ -0.93
UPF3AP1-201ENST00000413731 NCOR2Q9Y618 2525 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 MED19A0JLT2 244 aaPredicted RBP9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 SFI1A8K8P3 1242 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 GAS7O60861 476 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 OFD1O75665 1012 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 CNPP09543 421 aaKnown RBP9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 MAPK1P28482 360 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 JAK3P52333 1124 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 GUCY1B3Q02153 619 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 RNASELQ05823 741 aaKnown RBP9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 LETM2Q2VYF4 491 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 LRCH2Q5VUJ6 765 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 PIK3AP1Q6ZUJ8 805 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 PPFIBP1Q86W92 1011 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 DIS3L2Q8IYB7 885 aaKnown RBP9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 FAM160A2Q8N612 972 aaPredicted RBP9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 RSAD2Q8WXG1 361 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 ACSF2Q96CM8 615 aaPredicted RBP9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 NLRP4Q96MN2 994 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 KLHL5Q96PQ7 755 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 TEKT3Q9BXF9 490 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 MAN1C1Q9NR34 630 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 CHST12Q9NRB3 414 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 IGSF5Q9NSI5 407 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 NRBP2Q9NSY0 501 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 MARCH5Q9NX47 278 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 EGFL7Q9UHF1 273 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 SPTBN2O15020 2390 aa9.21□□□□□ -0.94
UPF3AP1-201ENST00000413731 TPRP12270 2363 aaKnown RBP9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 IGKV6-21A0A0C4DH24 114 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 KRBA1A5PL33 1030 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 M0R2N6 131 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 DDHD2O94830 711 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 STBD1O95210 358 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 TDP2O95551 362 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 MYBP10242 640 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 KLRC2P26717 231 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 SFNP31947 248 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 RAB27AP51159 221 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 USP11P51784 963 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 AFF1P51825 1210 aaKnown RBP9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 NR5A1Q13285 461 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 PLA2G4FQ68DD2 849 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 ADGRD1Q6QNK2 874 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 CATSPER4Q7RTX7 472 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms