RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 TNS4Q8IZW8 715 aa12.65□□□□□ -0.38
HDAC9-206ENST00000413380 MFSD14AQ96MC6 490 aa12.65□□□□□ -0.38
HDAC9-206ENST00000413380 MSTO1Q9BUK6 570 aa12.65□□□□□ -0.38
HDAC9-206ENST00000413380 PPP1R12CQ9BZL4 782 aa12.65□□□□□ -0.38
HDAC9-206ENST00000413380 SAMSN1Q9NSI8 373 aaKnown RBP12.65□□□□□ -0.38
HDAC9-206ENST00000413380 ANKFY1Q9P2R3 1169 aa12.65□□□□□ -0.38
HDAC9-206ENST00000413380 CPSF3Q9UKF6 684 aaKnown RBP12.65□□□□□ -0.38
HDAC9-206ENST00000413380 TDRD15B5MCY1 1934 aaKnown RBP12.64□□□□□ -0.39
HDAC9-206ENST00000413380 A0A0U1RQF3 1178 aa12.64□□□□□ -0.39
HDAC9-206ENST00000413380 MGEA5O60502 916 aa12.64□□□□□ -0.39
HDAC9-206ENST00000413380 EXOC3O60645 756 aa12.64□□□□□ -0.39
HDAC9-206ENST00000413380 CLTAP09496 248 aa12.64□□□□□ -0.39
HDAC9-206ENST00000413380 CYP2J2P51589 502 aa12.64□□□□□ -0.39
HDAC9-206ENST00000413380 CLDN10P78369 228 aa12.64□□□□□ -0.39
HDAC9-206ENST00000413380 FAM189BP81408 668 aa12.64□□□□□ -0.39
HDAC9-206ENST00000413380 NFX1Q12986 1120 aaKnown RBP12.64□□□□□ -0.39
HDAC9-206ENST00000413380 SNRNP35Q16560 246 aaKnown RBP12.64□□□□□ -0.39
HDAC9-206ENST00000413380 TPD52L1Q16890 204 aaPredicted RBP12.64□□□□□ -0.39
HDAC9-206ENST00000413380 TCP11X2Q5H9J9 407 aa12.64□□□□□ -0.39
HDAC9-206ENST00000413380 APTXQ7Z2E3 356 aaKnown RBP12.64□□□□□ -0.39
HDAC9-206ENST00000413380 MRPL10Q7Z7H8 261 aaKnown RBP12.64□□□□□ -0.39
HDAC9-206ENST00000413380 BRSK2Q8IWQ3 736 aa12.64□□□□□ -0.39
HDAC9-206ENST00000413380 ZSWIM2Q8NEG5 633 aa12.64□□□□□ -0.39
HDAC9-206ENST00000413380 LINC01599Q8WXQ3 324 aa12.64□□□□□ -0.39
HDAC9-206ENST00000413380 SEPT8Q92599 483 aa12.64□□□□□ -0.39
HDAC9-206ENST00000413380 SCLYQ96I15 445 aa12.64□□□□□ -0.39
HDAC9-206ENST00000413380 CNOT6LQ96LI5 555 aaKnown RBP12.64□□□□□ -0.39
HDAC9-206ENST00000413380 EIF2AQ9BY44 585 aaKnown RBP12.64□□□□□ -0.39
HDAC9-206ENST00000413380 METTL14Q9HCE5 456 aaKnown RBP12.64□□□□□ -0.39
HDAC9-206ENST00000413380 RGS18Q9NS28 235 aa12.64□□□□□ -0.39
HDAC9-206ENST00000413380 FRMD4BQ9Y2L6 1034 aa12.64□□□□□ -0.39
HDAC9-206ENST00000413380 FNDC1Q4ZHG4 1894 aaPredicted RBP12.63□□□□□ -0.39
HDAC9-206ENST00000413380 ZNF233A6NK53 670 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 CCDC85CA6NKD9 419 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 C9IYK1 514 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 GOLGA6L19H0YKK7 550 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 EPB41P11171 864 aaKnown RBP12.63□□□□□ -0.39
HDAC9-206ENST00000413380 SKIP12755 728 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 PRKCSHP14314 528 aaPredicted RBP12.63□□□□□ -0.39
HDAC9-206ENST00000413380 RAG1P15918 1043 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 ZSCAN20P17040 1043 aaPredicted RBP12.63□□□□□ -0.39
HDAC9-206ENST00000413380 CCL23P55773 120 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 TPM4P67936 248 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 CYP24A1Q07973 514 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 TWF2Q6IBS0 349 aaKnown RBP12.63□□□□□ -0.39
HDAC9-206ENST00000413380 CNKSR3Q6P9H4 555 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 SARM1Q6SZW1 724 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 INTS8Q75QN2 995 aaKnown RBP12.63□□□□□ -0.39
HDAC9-206ENST00000413380 RTN4RL1Q86UN2 441 aaPredicted RBP12.63□□□□□ -0.39
HDAC9-206ENST00000413380 CDR2LQ86X02 465 aaPredicted RBP12.63□□□□□ -0.39
HDAC9-206ENST00000413380 CBWD2Q8IUF1 395 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 FAM186BQ8IYM0 893 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 TMEM199Q8N511 208 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 CEP120Q8N960 986 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 SMG8Q8ND04 991 aaKnown RBP12.63□□□□□ -0.39
HDAC9-206ENST00000413380 RNF214Q8ND24 703 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 DBF4BQ8NFT6 615 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 TMC2Q8TDI7 906 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 SAAL1Q96ER3 474 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 TCHPQ9BT92 498 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 PCIF1Q9H4Z3 704 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 C1orf112Q9NSG2 853 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 FAM105AQ9NUU6 356 aa12.63□□□□□ -0.39
HDAC9-206ENST00000413380 LIMA1Q9UHB6 759 aaKnown RBP12.63□□□□□ -0.39
HDAC9-206ENST00000413380 PDE4DIPQ5VU43 2346 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 TTC26A0AVF1 554 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 KCNJ18B7U540 433 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 INPPL1O15357 1258 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 MEFVO15553 781 aaPredicted RBP12.62□□□□□ -0.39
HDAC9-206ENST00000413380 NPTXRO95502 500 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 STAG3L1P0CL83 205 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 ATP1A3P13637 1013 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 ATF7P17544 494 aaPredicted RBP12.62□□□□□ -0.39
HDAC9-206ENST00000413380 PPP2R3AQ06190 1150 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 BFSP1Q12934 665 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 KCNJ12Q14500 433 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 PSMD6Q15008 389 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 ENOX2Q16206 610 aaKnown RBP12.62□□□□□ -0.39
HDAC9-206ENST00000413380 TMEM132AQ24JP5 1023 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 XKR4Q5GH76 650 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 ZBTB41Q5SVQ8 909 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 CEP135Q66GS9 1140 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 ALKAL1Q6UXT8 129 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 SLC24A5Q71RS6 500 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 ZBTB33Q86T24 672 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 ZNF598Q86UK7 904 aaKnown RBP12.62□□□□□ -0.39
HDAC9-206ENST00000413380 CRIPAKQ8N1N5 446 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 PARD3BQ8TEW8 1205 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 EEF2KMTQ96G04 330 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 TSPAN18Q96SJ8 248 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 ADAM2Q99965 735 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 FAM213AQ9BRX8 229 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 ELAC1Q9H777 363 aaKnown RBP12.62□□□□□ -0.39
HDAC9-206ENST00000413380 PLEKHA5Q9HAU0 1116 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 PRDM5Q9NQX1 630 aaPredicted RBP12.62□□□□□ -0.39
HDAC9-206ENST00000413380 ARMCX3Q9UH62 379 aaPredicted RBP12.62□□□□□ -0.39
HDAC9-206ENST00000413380 IPPQ9Y573 584 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 PCDHB2Q9Y5E7 798 aa12.62□□□□□ -0.39
HDAC9-206ENST00000413380 GOLGA8IPA6NC78 632 aa12.61□□□□□ -0.39
HDAC9-206ENST00000413380 GOLGA8JA6NMD2 632 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms