RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 SPDYE4A6NLX3 237 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 PTGESO14684 152 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 INPPL1O15357 1258 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 SOD2P04179 222 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 THP07101 528 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 HSP90AA1P07900 732 aaKnown RBP11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 CNPP09543 421 aaKnown RBP11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 SRGAP2BP0DMP2 458 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 IGFBP6P24592 240 aaPredicted RBP11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 MATR3P43243 847 aaKnown RBP eCLIP11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 SMTNP53814 917 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 GRIK3Q13003 919 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 STRN3Q13033 797 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 DCAF4L1Q3SXM0 396 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 ZNF568Q3ZCX4 644 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 RARS2Q5T160 578 aaKnown RBP11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 KIAA1841Q6NSI8 718 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 TMEM184AQ6ZMB5 413 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 GLYCTKQ8IVS8 523 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 MYCT1Q8N699 235 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 RAD54LQ92698 747 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 CASP10Q92851 521 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 SNX21Q969T3 373 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 REEP2Q9BRK0 252 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 NTPCRQ9BSD7 190 aaKnown RBP11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 EMILIN2Q9BXX0 1053 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 GPR62Q9BZJ7 368 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 CDT1Q9H211 546 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 MRPL17Q9NRX2 175 aaKnown RBP11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 BLOC1S4Q9NUP1 217 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 ARHGAP28Q9P2N2 729 aa11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 FBXO2Q9UK22 296 aaPredicted RBP11.18□□□□□ -0.62
NCKIPSD-202ENST00000413374 PHLPP2Q6ZVD8 1323 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 KIAA1671Q9BY89 1806 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 CARNS1A5YM72 827 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 LILRB3O75022 631 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 FAM13AO94988 1023 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 URODP06132 367 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 SPATA31D3P0C874 917 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 RPL17P18621 184 aaKnown RBP11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 DDIT3P35638 169 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 TUSC3Q13454 348 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 GIT2Q14161 759 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 HSP90AA2PQ14568 343 aaPredicted RBP11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 FUT10Q6P4F1 479 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 TMC5Q6UXY8 1006 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 SPATA31D4Q6ZUB0 917 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 DYMQ7RTS9 669 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 CEP57Q86XR8 500 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 PALB2Q86YC2 1186 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 TMEM161BQ8NDZ6 487 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 SLC22A17Q8WUG5 538 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 SPIRE2Q8WWL2 714 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 HERC2P3Q9BVR0 1158 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 TIPINQ9BVW5 301 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 ZSCAN16Q9H4T2 348 aaPredicted RBP11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 C17orf75Q9HAS0 396 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 GOLGA2P5Q9HBQ8 144 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 PTPRHQ9HD43 1115 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 ANKFY1Q9P2R3 1169 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 DAXXQ9UER7 740 aaPredicted RBP11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 PRKAG3Q9UGI9 489 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 RAPGEFL1Q9UHV5 662 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 SRPRBQ9Y5M8 271 aaKnown RBP11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 PLXNA4Q9HCM2 1894 aa11.17□□□□□ -0.62
NCKIPSD-202ENST00000413374 C19orf67A6NJJ6 358 aa11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 PI4K2BG5E9Z4 385 aa11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 TULP1O00294 542 aaPredicted RBP11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 TEX28O15482 410 aa11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 KIF4AO95239 1232 aa11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 MAPTP10636 758 aaKnown RBP11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 GLUD2P49448 558 aa11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 YARSP54577 528 aaKnown RBP11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 CBX2Q14781 532 aaPredicted RBP11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 TPRNQ4KMQ1 711 aa11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 KIAA0319Q5VV43 1072 aa11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 RRAGBQ5VZM2 374 aa11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 HAUS6Q7Z4H7 955 aa11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 APBB1IPQ7Z5R6 666 aaPredicted RBP11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 RNF135Q8IUD6 432 aa11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 KCTD17Q8N5Z5 321 aa11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 RIN2Q8WYP3 895 aaPredicted RBP11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 BICD1Q96G01 975 aa11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 FBXL18Q96ME1 805 aa11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 CCDC94Q9BW85 323 aaPredicted RBP11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 PHF7Q9BWX1 381 aaPredicted RBP11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 CCSER1Q9C0I3 900 aa11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 TSHZ2Q9NRE2 1034 aa11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 LARSQ9P2J5 1176 aaKnown RBP11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 CCDC39Q9UFE4 941 aa11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 MUTYHQ9UIF7 546 aa11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 ADAM28Q9UKQ2 775 aa11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 IRAK3Q9Y616 596 aa11.16□□□□□ -0.62
NCKIPSD-202ENST00000413374 SMIM28A0A1B0GU29 152 aa11.15□□□□□ -0.62
NCKIPSD-202ENST00000413374 FSD2A1L4K1 749 aa11.15□□□□□ -0.62
NCKIPSD-202ENST00000413374 K7ENM7 598 aa11.15□□□□□ -0.62
NCKIPSD-202ENST00000413374 SLC26A4O43511 780 aa11.15□□□□□ -0.62
NCKIPSD-202ENST00000413374 TRAK2O60296 914 aa11.15□□□□□ -0.62
NCKIPSD-202ENST00000413374 MCF2P10911 925 aa11.15□□□□□ -0.62
NCKIPSD-202ENST00000413374 HOXB8P17481 243 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms