RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 KRT35Q92764 455 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 BICD1Q96G01 975 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 KIAA1586Q9HCI6 787 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 ACP6Q9NPH0 428 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 XPNPEP1Q9NQW7 623 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 UVRAGQ9P2Y5 699 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 RASAL2Q9UJF2 1139 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 TRPC6Q9Y210 931 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 NFS1Q9Y697 457 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 DLATP10515 647 aaKnown RBP12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 CHRNA3P32297 505 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 PEX5P50542 639 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 ATP1A2P50993 1020 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 DRG2P55039 364 aaKnown RBP12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 XKR3Q5GH77 459 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 SPDYCQ5MJ68 293 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 CATSPERGQ6ZRH7 1159 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 TMC3Q7Z5M5 1100 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 CCDC60Q8IWA6 550 aaPredicted RBP12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 ARFGAP2Q8N6H7 521 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 ZNF564Q8TBZ8 553 aaPredicted RBP12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 ZNF653Q96CK0 615 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 TRIM51Q9BSJ1 452 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 NUP85Q9BW27 656 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 ERVK-5Q9HDB9 667 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 A1CFQ9NQ94 594 aaKnown RBP12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 TOPORSQ9NS56 1045 aaPredicted RBP12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 ADGRA3Q8IWK6 1321 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 MYO1CO00159 1063 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 PHF2O75151 1096 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 FLT3P36888 993 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 SP4Q02446 784 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 GCNT1Q02742 428 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 DHX9Q08211 1270 aaKnown RBP12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 BIRC3Q13489 604 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 DUPD1Q68J44 220 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 ACAD10Q6JQN1 1059 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 APOBEC3FQ8IUX4 373 aaKnown RBP12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 EFCAB13Q8IY85 973 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 FMO2Q99518 471 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 FAM213AQ9BRX8 229 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 TRIM31Q9BZY9 425 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 TSPYL1Q9H0U9 437 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 HOXC10Q9NYD6 342 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 ARHGAP28Q9P2N2 729 aa12.34□□□□□ -0.43
TRAFD1-202ENST00000412615 FZD9O00144 591 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 SPOPO43791 374 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 ZNF844Q08AG5 666 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 PDCLQ13371 301 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 ANGEL2Q5VTE6 544 aaKnown RBP12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 TTC19Q6DKK2 380 aaPredicted RBP12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 ATP8B4Q8TF62 1192 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 DDX1Q92499 740 aaKnown RBP12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 CD101Q93033 1021 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 TATDN2Q93075 761 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 POLR3FQ9H1D9 316 aaPredicted RBP12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 DOCK1Q14185 1865 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 EBAG9O00559 213 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 PODXLO00592 558 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 EXTL3O43909 919 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 ZBTB7AO95365 584 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 SUPT20HL2P0C7V6 817 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 SCP2P22307 547 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 CTNNA2P26232 953 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 GBP1P32455 592 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 COPB2P35606 906 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 LIG4P49917 911 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 SUPT20HL1Q3ZLR7 823 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 JAMLQ86YT9 394 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 GLG1Q92896 1179 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 MAGOHBQ96A72 148 aaKnown RBP12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 CENPHQ9H3R5 247 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 CHORDC1Q9UHD1 332 aaPredicted RBP12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 LCMT1Q9UIC8 334 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 MTUS1Q9ULD2 1270 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 PCDHA3Q9Y5H8 950 aa12.33□□□□□ -0.44
TRAFD1-202ENST00000412615 LTBP3Q9NS15 1303 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 KIAA0391O15091 583 aaKnown RBP12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 ATMINO43313 823 aaPredicted RBP12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 KRT5P13647 590 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 MARCKSL1P49006 195 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 STRN3Q13033 797 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 SKIDA1Q1XH10 827 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 MTERF2Q49AM1 385 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 PRAMEF18Q5VWM3 479 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 AADACL2Q6P093 401 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 PRELID2Q8N945 189 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 RUNDC3BQ96NL0 473 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 FNBP1Q96RU3 617 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 C1orf112Q9NSG2 853 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 PCYOX1Q9UHG3 505 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 MYPNQ86TC9 1320 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 GRIN3BO60391 1043 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 PPFIA2O75334 1257 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 PYGMP11217 842 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 PTGIRP43119 386 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 CCT5P48643 541 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 POLGP54098 1239 aaPredicted RBP12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 RWDD2BP57060 319 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 CLDN10P78369 228 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms